CX069780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069780 vs. ExPASy Swiss-Prot
Match: AB15B_ARATH (ABC transporter B family member 15 OS=Arabidopsis thaliana GN=ABCB15 PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.088e-44 Identity = 87/174 (50.00%), Postives = 119/174 (68.39%), Query Frame = -2 Query: 2 LSVYFTDDHRDIKSQTRIYXXXXXXXXXXXFITNVFQHYYFGIMGGRLTTRVRKTLFGKILTFEVEWFDQ-EDSGGAICARLATDATRVKTLVADYLSLLAQNVSSAILAVVLGLVLSWTLALVAIYMQPLIIRVFYTKAIMMK-MSEKVVKAQSKSSGLASEAVGNHSIITAF 517 +SVYF H +IK +TRIY F+ N+ QHY F MG LT R+R+ + K+LTFEV WFD+ E+S GAIC+RLA DA V++LV D ++L+ Q VS+ +A +GLV++W LALV I +QP+II FYT+ +++K MS+K +KAQ +SS LA+EAV N ITAF Sbjct: 697 VSVYFLTSHDEIKEKTRIYALSFVGLAVLSFLINISQHYNFAYMGEYLTKRIRERMLSKVLTFEVGWFDRDENSSGAICSRLAKDANVVRSLVGDRMALVVQTVSAVTIAFTMGLVIAWRLALVMIAVQPVIIVCFYTRRVLLKSMSKKAIKAQDESSKLAAEAVSNVRTITAF 870 HSP 2 Score: 37.7354 bits (86), Expect = 1.088e-44 Identity = 17/42 (40.48%), Postives = 23/42 (54.76%), Query Frame = -1 Query: 507 LWVMMAPRWKPALLGCVGGLCDGSIQPPCCFCLGGILSLICL 632 L M P WK AL GC+ G+IQP + LG ++S+ L Sbjct: 661 LLAMNLPEWKQALYGCISATLFGAIQPAYAYSLGSMVSVYFL 702
BLAST of CX069780 vs. ExPASy Swiss-Prot
Match: MDR_ORYSJ (Putative multidrug resistance protein OS=Oryza sativa subsp. japonica GN=Os02g0190300 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.002e-43 Identity = 85/174 (48.85%), Postives = 120/174 (68.97%), Query Frame = -2 Query: 2 LSVYFTDDHRDIKSQTRIYXXXXXXXXXXXFITNVFQHYYFGIMGGRLTTRVRKTLFGKILTFEVEWFDQ-EDSGGAICARLATDATRVKTLVADYLSLLAQNVSSAILAVVLGLVLSWTLALVAIYMQPLIIRVFYTKAIMMK-MSEKVVKAQSKSSGLASEAVGNHSIITAF 517 +SVYF DH +IK +TR Y F+ N+ QHY FG MG LT R+R+ + KILTFE+ WFD+ E+S GAIC++LA DA V++LV D ++L+ Q +S+ ++A +GLV++W LALV I +QPLII FY + +++K MS+K + AQ++SS LA+EAV N ITAF Sbjct: 699 ISVYFLTDHAEIKDKTRTYALIFVGLAVLSFLINIGQHYNFGAMGEYLTKRIREQMLAKILTFEIGWFDRDENSSGAICSQLAKDANVVRSLVGDRMALVIQTISAVLIACTMGLVIAWRLALVMIAVQPLIIVCFYARRVLLKSMSKKSIHAQAESSKLAAEAVSNLRTITAF 872 HSP 2 Score: 35.039 bits (79), Expect = 2.002e-43 Identity = 15/42 (35.71%), Postives = 24/42 (57.14%), Query Frame = -1 Query: 507 LWVMMAPRWKPALLGCVGGLCDGSIQPPCCFCLGGILSLICL 632 L ++ AP WK AL+G + G IQP + +G ++S+ L Sbjct: 663 LLMLNAPEWKQALMGSFSAVVFGGIQPAYAYAMGSMISVYFL 704
BLAST of CX069780 vs. ExPASy Swiss-Prot
Match: AB17B_ARATH (ABC transporter B family member 17 OS=Arabidopsis thaliana GN=ABCB17 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.590e-41 Identity = 91/186 (48.92%), Postives = 124/186 (66.67%), Query Frame = -2 Query: 2 LRVVSAWGESYHLSVYFTDDHRDIKSQTRIYXXXXXXXXXXXFITNVFQHYYFGIMGGRLTTRVRKTLFGKILTFEVEWFDQED-SGGAICARLATDATRVKTLVADYLSLLAQNVSSAILAVVLGLVLSWTLALVAIYMQPLIIRVFYTKAIMMK-MSEKVVKAQSKSSGLASEAVGNHSIITAF 553 L+ VSA+ +SV+F H IK +TRIY F+ N+ QHY F MG LT R+R+ + KILTFEV WFD +D S GAIC+RLA DA V+++V D +SLL Q +S+ I+A ++GLV++W LA+V I +QPLI+ FYT+ +++K +SEK KAQ +SS LA+EAV N ITAF Sbjct: 685 LQPVSAYSAGSVISVFFLTSHDQIKEKTRIYVLLFVGLAIFSFLVNISQHYGFAYMGEYLTKRIREQMLSKILTFEVNWFDIDDNSSGAICSRLAKDANVVRSMVGDRMSLLVQTISAVIIACIIGLVIAWRLAIVMISVQPLIVVCFYTQRVLLKSLSEKASKAQDESSKLAAEAVSNIRTITAF 870
BLAST of CX069780 vs. ExPASy Swiss-Prot
Match: AB18B_ARATH (ABC transporter B family member 18 OS=Arabidopsis thaliana GN=ABCB18 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.785e-38 Identity = 83/187 (44.39%), Postives = 121/187 (64.71%), Query Frame = -2 Query: 2 SLRVVSAWGESYHLSVYFTDDHRDIKSQTRIYXXXXXXXXXXXFITNVFQHYYFGIMGGRLTTRVRKTLFGKILTFEVEWFDQ-EDSGGAICARLATDATRVKTLVADYLSLLAQNVSSAILAVVLGLVLSWTLALVAIYMQPLIIRVFYTKAIMMK-MSEKVVKAQSKSSGLASEAVGNHSIITAF 556 +++ + ++ +SVYF H IK +TRIY F++N+ QHY F MG LT R+R+ + GKILTFEV WFD+ E+S GAIC+RLA DA V++LV D +SLL Q +S+ + +GLV+SW ++V + +QP+I+ FYT+ +++K MS +K Q +SS LA+EAV N ITAF Sbjct: 669 AVQPIYSYSSGSMVSVYFLASHDQIKEKTRIYVLLFVGLALFTFLSNISQHYGFAYMGEYLTKRIRERMLGKILTFEVNWFDKDENSSGAICSRLAKDANMVRSLVGDRMSLLVQTISAVSITCAIGLVISWRFSIVMMSVQPVIVVCFYTQRVLLKSMSRNAIKGQDESSKLAAEAVSNIRTITAF 855
BLAST of CX069780 vs. ExPASy Swiss-Prot
Match: AB22B_ARATH (ABC transporter B family member 22 OS=Arabidopsis thaliana GN=ABCB22 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.079e-37 Identity = 82/187 (43.85%), Postives = 122/187 (65.24%), Query Frame = -2 Query: 2 SLRVVSAWGESYHLSVYFTDDHRDIKSQTRIYXXXXXXXXXXXFITNVFQHYYFGIMGGRLTTRVRKTLFGKILTFEVEWFDQ-EDSGGAICARLATDATRVKTLVADYLSLLAQNVSSAILAVVLGLVLSWTLALVAIYMQPLIIRVFYTKAIMMK-MSEKVVKAQSKSSGLASEAVGNHSIITAF 556 +L + A+ +SVYF H ++K +TRIY F+ ++ Q Y F MG LT R+R+ + K+LTFEV WFD+ E+S G+IC+RLA DA V++LV + +SLL Q +S+ +A LGL +SW L++V I +QP+++ FYT+ I++K +S+K +KAQ +SS LA+EAV N ITAF Sbjct: 706 ALHPIYAYASGSMVSVYFLTSHDEMKEKTRIYVLLFVGLAVLCFLISIIQQYSFAYMGEYLTKRIRENILSKLLTFEVSWFDEDENSSGSICSRLAKDANVVRSLVGERVSLLVQTISAVSVACTLGLAISWKLSIVMIAIQPVVVGCFYTQRIVLKSISKKAIKAQDESSKLAAEAVSNIRTITAF 892
BLAST of CX069780 vs. ExPASy Swiss-Prot
Match: AB16B_ARATH (ABC transporter B family member 16 OS=Arabidopsis thaliana GN=ABCB16 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.584e-36 Identity = 80/187 (42.78%), Postives = 119/187 (63.64%), Query Frame = -2 Query: 2 SLRVVSAWGESYHLSVYFTDDHRDIKSQTRIYXXXXXXXXXXXFITNVFQHYYFGIMGGRLTTRVRKTLFGKILTFEVEWFDQED-SGGAICARLATDATRVKTLVADYLSLLAQNVSSAILAVVLGLVLSWTLALVAIYMQPLIIRVFYTKAIMMK-MSEKVVKAQSKSSGLASEAVGNHSIITAF 556 +++ + A+ +SV+F +H IK TRIY F T++ Q Y F MG LT R+R+ + KILTFEV WFD+E+ S GAIC+RLA DA V++LV + +SLL Q +S+ ++A +GLV++W +V I +QP+II +Y + +++K MS+K + AQ +SS LA+EAV N IT F Sbjct: 670 AVQPIYAYSSGLMISVFFLTNHEQIKENTRIYVLLFFGLALFTFFTSISQQYSFSYMGEYLTKRIREQMLSKILTFEVNWFDEEENSSGAICSRLAKDANVVRSLVGERMSLLVQTISTVMVACTIGLVIAWRFTIVMISVQPVIIVCYYIQRVLLKNMSKKAIIAQDESSKLAAEAVSNIRTITTF 856
BLAST of CX069780 vs. ExPASy Swiss-Prot
Match: AB8B_ARATH (Putative ABC transporter B family member 8 OS=Arabidopsis thaliana GN=ABCB8 PE=5 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.253e-30 Identity = 71/173 (41.04%), Postives = 106/173 (61.27%), Query Frame = -2 Query: 5 LSVYFTDDHRDIKSQTRIYXXXXXXXXXXXFITNVFQHYYFGIMGGRLTTRVRKTLFGKILTFEVEWFDQEDS-GGAICARLATDATRVKTLVADYLSLLAQNVSSAILAVVLGLVLSWTLALVAIYMQPLIIRVFYTKAIMM-KMSEKVVKAQSKSSGLASEAVGNHSIITA 517 +S +F ++++ + IY N+ QHY F MG RL R+R + KI TFE WFD E++ IC+RL + + VK+LVAD +SLL Q +S +A+++GL++SW LALV I +QPL I FYTK +++ K+S AQ++SS +ASEA+ NH I+T+ Sbjct: 701 ISAFFAKSSQEMQDKIHIYSLIFISLTFLSITLNLLQHYSFAKMGERLMQRLRLKMLEKIFTFEPAWFDVEENFTSEICSRLNNEVSIVKSLVADRISLLVQTISGVTIAMIIGLLISWKLALVMIAVQPLSILCFYTKKVLLSKISNNYAYAQNRSSQIASEAIYNHKIVTS 873
BLAST of CX069780 vs. ExPASy Swiss-Prot
Match: AB14B_ARATH (ABC transporter B family member 14 OS=Arabidopsis thaliana GN=ABCB14 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.076e-23 Identity = 55/140 (39.29%), Postives = 85/140 (60.71%), Query Frame = -2 Query: 2 VFQHYYFGIMGGRLTTRVRKTLFGKILTFEVEWFD-QEDSGGAICARLATDATRVKTLVADYLSLLAQNVSSAILAVVLGLVLSWTLALVAIYMQPLIIRVFYTKAIMMK-MSEKVVKAQSKSSGLASEAVGNHSIITAF 415 + QHY++ +MG RLT+RVR +LF IL+ E+ WFD E++ G++ + LA DAT V++ +AD LS + QN+S I A+ L SW +A V PL+I T+ + +K +A S+++ LA EA+ N + AF Sbjct: 742 ILQHYFYTLMGERLTSRVRLSLFSAILSNEIGWFDLDENNTGSLTSILAADATLVRSAIADRLSTIVQNLSLTITALALAFFYSWRVAAVVTACFPLLIAASLTEQLFLKGFGGDYTRAYSRATSLAREAISNIRTVAAF 881 HSP 2 Score: 27.335 bits (59), Expect = 3.076e-23 Identity = 15/40 (37.50%), Postives = 21/40 (52.50%), Query Frame = -1 Query: 531 SGTLWVMM---APRWKPALLGCVGGLCDGSIQPPCCFCLG 641 S +W ++ AP W ALLG +G + GS P F +G Sbjct: 666 SSMIWELIKLNAPEWLYALLGSIGAVLAGS--QPALFSMG 703
BLAST of CX069780 vs. ExPASy Swiss-Prot
Match: AB1B_ARATH (ABC transporter B family member 1 OS=Arabidopsis thaliana GN=ABCB1 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.142e-22 Identity = 64/187 (34.22%), Postives = 96/187 (51.34%), Query Frame = -2 Query: 2 SLRVVSAWGESYHLSVYFTDDHRDIKSQTRIYXXXXXXXXXXXFITNVFQHYYFGIMGGRLTTRVRKTLFGKILTFEVEWFDQEDSGGA-ICARLATDATRVKTLVADYLSLLAQNVSSAILAVVLGLVLSWTLALVAIYMQPLII-RVFYTKAIMMKMSEKVVKAQSKSSGLASEAVGNHSIITAF 556 SL A+ S LSVY+ DH + Q Y + N QH ++ I+G LT RVR+ + +L E+ WFDQE++ A I ARLA DA V++ + D +S++ QN + ++A G VL W LALV + + P+++ K M S + A +K + LA EA+ N + AF Sbjct: 712 SLSAFFAYVLSAVLSVYYNPDHEYMIKQIDKYCYLLIGLSSAALVFNTLQHSFWDIVGENLTKRVREKMLSAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKGTQLAGEAIANVRTVAAF 898
BLAST of CX069780 vs. ExPASy Swiss-Prot
Match: AB19B_ARATH (ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.141e-22 Identity = 54/174 (31.03%), Postives = 99/174 (56.90%), Query Frame = -2 Query: 2 LSVYFTDDHRDIKSQTRIYXXXXXXXXXXXFITNVFQHYYFGIMGGRLTTRVRKTLFGKILTFEVEWFDQEDSGGA-ICARLATDATRVKTLVADYLSLLAQNVSSAILAVVLGLVLSWTLALVAIYMQPLIIRVFYTKAIMMK-MSEKVVKAQSKSSGLASEAVGNHSIITAF 517 + V++ D+ ++ +T+ Y + QHY+F IMG LTTRVR+ + IL EV WFD+++ + I ARLATDA VK+ +A+ +S++ QN++S + + ++ ++ W ++L+ + PL++ + + + +K + KA +K+S +A E V N + AF Sbjct: 712 IEVFYYTDYDSMERKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLSAILRNEVGWFDEDEHNSSLIAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAF 885 The following BLAST results are available for this feature:
BLAST of CX069780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069780 ID=CX069780; Name=CX069780; organism=Citrus sinensis; type=EST; length=821bpback to top |