CX069768

Overview
NameCX069768
Unique NameCX069768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12452 contig Csv1_Contig12452:185..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y643_BACTN (Uncharacterized RNA methyltransferase BT_0643 OS=Bacteroides thetaiotaomicron GN=BT_0643 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.148e-38
Identity = 87/179 (48.60%), Postives = 116/179 (64.80%), Query Frame = -2
Query:  219 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDL-NKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 752
            QTN+ QA  LYK+  + AGL G   ++V DL+ GTGTI   ++R  + V G E VP+AI DA  NA++N I NA F  GD+ + +  +F N   +PD++I+DP R GMH  ++  +L  +  RIVYVSCNPAT ARDL         Q + G YK+K++QPVDMFPHT H+E V LLEL
Sbjct:  286 QTNSEQAYNLYKIAREFAGLTG--KELVYDLYTGTGTIANFVSRQARQVIGIEYVPEAIEDAKVNAEINEIKNALFYAGDMKDMLTQEFINQHGRPDVIITDPPRAGMHQDVVDVILFAEPKRIVYVSCNPATQARDL---------QLLDGKYKVKAVQPVDMFPHTHHVENVVLLEL 453          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y728_ENTFA (Uncharacterized RNA methyltransferase EF_0728 OS=Enterococcus faecalis GN=EF_0728 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.843e-36
Identity = 83/176 (47.16%), Postives = 111/176 (63.07%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q N  Q EV+Y+ +++ A L G+  +IV+D +CG GTIGLTLA+  K VYG EV+ +A+ DA  NAKLNNI NATF  G   ++         +PD+V+ DP R G+  +L+  L++ +  RIVYVSCNPAT ARD+  L         +G Y+ K +QPVD FP T HIE V LL
Sbjct:  287 QVNPQQTEVMYQKVKEYAALTGN--EIVVDAYCGIGTIGLTLAQDAKQVYGIEVIEEAVKDAENNAKLNNIENATFTAGLAEELLPKLVENGLQPDVVVVDPPRKGLDGQLVNTLIETQPERIVYVSCNPATLARDIALL--------TEGGYEAKEIQPVDNFPQTTHIESVTLL 452          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y687_BACHD (Uncharacterized RNA methyltransferase BH0687 OS=Bacillus halodurans GN=BH0687 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.843e-36
Identity = 85/178 (47.75%), Postives = 108/178 (60.67%), Query Frame = -2
Query:  219 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 752
            Q N  Q +VLY    + A L G  S+ V+D +CG GTI L LA+  KHVYG E+VP+AISDA RNA+LN  +N  F  GD  K+   +     + D+++ DP R G    L+K +L +K  R+VYVSCNPAT ARDL  L          G Y+ K +QPVDMFP T HIE V +LEL
Sbjct:  289 QVNPEQTKVLYDQALEFANLTG--SETVIDAYCGIGTISLFLAQQAKHVYGVEIVPEAISDAKRNARLNGFANVQFAVGDAEKVMPWWYAQGVRADVIVVDPPRKGCDEALLKTILNMKPDRVVYVSCNPATLARDLRVL--------EDGGYETKDVQPVDMFPWTTHIESVAVLEL 456          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y363_BACC1 (Uncharacterized RNA methyltransferase BCE_0363 OS=Bacillus cereus (strain ATCC 10987) GN=BCE_0363 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.332e-33
Identity = 79/176 (44.89%), Postives = 106/176 (60.23%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q N  Q +VLY    + A L  DG++ V+D +CG G+I L LA+  K VYG E+VP+AI DA RNA LNN++NA F  G+   +   +       D ++ DP R G    L+  ++ +K  R+VYVSCNPAT ARDL  L         +G YK + +QPVDMFPHT H+ECV L+
Sbjct:  290 QVNPEQTKVLYDKTLEYAKL--DGNETVIDAYCGIGSISLFLAQKAKKVYGVEIVPEAIEDAKRNAALNNMTNAEFGVGEAEVVIPKWYKEGVIADTMVVDPPRKGCDEALLNTIIDMKPKRVVYVSCNPATLARDLKVL--------EEGGYKTQEVQPVDMFPHTTHVECVVLM 455          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1941_CLOTE (Uncharacterized RNA methyltransferase CTC_01941 OS=Clostridium tetani GN=CTC_01941 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.977e-33
Identity = 73/173 (42.20%), Postives = 105/173 (60.69%), Query Frame = -2
Query:  234 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 752
            QTN+  AE LY ++ D  G     SK V DL+CGTGTIG  +A   K V G E++ +A+  A  NAKLNN++N  F+ GD+ ++         KPD++I DP RPG+H K +++++K  +P IVYVSCNP T   DL  L        ++  Y ++ ++ +DMFP TPH+E V
Sbjct:  288 QTNSKGAEKLYSIVRDFIG--ESKSKTVFDLYCGTGTIGQIVAPEAKKVIGIELIEEAVESARENAKLNNLNNCEFIAGDIAQV---IKEVKQKPDVIILDPPRPGVHPKALEYVIKFDSPTIVYVSCNPKTLVEDLKVL--------VENGYVIEKVKGMDMFPSTPHVETV 447          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1751_LISMO (Uncharacterized RNA methyltransferase lmo1751 OS=Listeria monocytogenes GN=lmo1751 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.194e-33
Identity = 79/179 (44.13%), Postives = 106/179 (59.22%), Query Frame = -2
Query:  216 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLELS 752
            Q N  Q EVLY+   D A L G+  + V+D +CG G+I L LA+  KHVYG E+V QAI DA  NA+LN ++N TF  G   ++   +  A    D+++ DP R G   KL++ +L +K  ++VYVSCNP T ARD+  L          G Y  K +QPVDMFP T HIE V +L L+
Sbjct:  285 QVNPLQTEVLYQQAIDAAELTGE--ETVIDAYCGIGSISLCLAKKAKHVYGVEIVDQAIQDARANAELNELANTTFETGKAEEVIPSWYKAGIVADVLVVDPPRKGCDEKLLETILAMKPKKVVYVSCNPGTLARDMKIL--------TDGGYVAKKVQPVDMFPMTTHIEAVTVLHLN 453          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y364_BACCR (Uncharacterized RNA methyltransferase BC_0364 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=BC_0364 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.784e-33
Identity = 79/178 (44.38%), Postives = 107/178 (60.11%), Query Frame = -2
Query:  219 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 752
            Q N  Q +VLY    + A L  +G++ V+D +CG G+I L LA+  K VYG E+VP+AI DA RNA LNN++NA F  G+   +   +       D ++ DP R G    L+  ++ +K  R+VYVSCNPAT ARDL  L         +G YK + +QPVDMFPHT H+ECV  L+L
Sbjct:  290 QVNPEQTKVLYDKTLEYAKL--NGNETVIDAYCGIGSISLFLAQKAKKVYGVEIVPEAIEDANRNAALNNMTNAEFGVGEAEVVIPKWYKEGVIADTMVVDPPRKGCDEALLNTIIDMKPNRVVYVSCNPATLARDLKVL--------EEGGYKTQEVQPVDMFPHTTHVECVAWLKL 457          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y009_CHLTE (Uncharacterized RNA methyltransferase CT0009 OS=Chlorobium tepidum GN=CT0009 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.784e-33
Identity = 83/179 (46.37%), Postives = 101/179 (56.42%), Query Frame = -2
Query:  222 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG--DFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 752
            QTNT QAE LY  I    G+  + +  V DL+CGTGTI L LAR  K   G EVV  A+ DA  NA+LN +SN  F Q DL       +    + KP I+++DP R GMH K +  +LKL+  RIVYVSCNP   ARD        G +     Y++ S QPVDMFP T HIE V   E
Sbjct:  312 QTNTRQAETLYDQIIAVGGITPEDT--VYDLYCGTGTITLYLARHCKQAIGIEVVESAVKDAEMNAELNGLSNTVFFQADLKNFHAMQEALEPYAKPRIIVTDPPRAGMHPKALDTMLKLQPERIVYVSCNPDNLARD--------GKEIAARGYRMTSAQPVDMFPQTNHIETVACFE 480          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1776_LISMF (Uncharacterized RNA methyltransferase LMOf2365_1776 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=LMOf2365_1776 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.860e-33
Identity = 79/179 (44.13%), Postives = 106/179 (59.22%), Query Frame = -2
Query:  216 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLELS 752
            Q N  Q EVLY+   D A L G+  + V+D +CG G+I L LA+  KHVYG E+V QAI DA  NA+LN ++N TF  G   ++   +  A    D+++ DP R G   KL++ +L +K  ++VYVSCNP T ARD+  L          G Y  K +QPVDMFP T HIE V +L L+
Sbjct:  285 QVNPIQTEVLYQQAIDAAELTGE--ETVIDAYCGIGSISLCLAKKAKHVYGVEIVDQAIQDARANAELNELANTTFETGKAEEVIPAWYKAGIVADVLVVDPPRKGCDEKLLETILAMKPKKVVYVSCNPGTLARDMKIL--------TDGGYVAKKVQPVDMFPMTTHIEAVTVLHLN 453          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1095_PORGI (Uncharacterized RNA methyltransferase PG_1095 OS=Porphyromonas gingivalis GN=PG_1095 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.860e-33
Identity = 84/177 (47.46%), Postives = 103/177 (58.19%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKI-GGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            QTN+ QA  LY++  + AGL GD  ++V DL+ GTGTI   +A     V G E VP+AI DA  N+ LN I N  F  GD+  I   DF     +PD+VI+DP R GMH  +I  +L     RIVYVSCNPAT ARDL  L          G Y+    +PVDMFPHT H+E V LL
Sbjct:  293 QTNSRQAYQLYRIAREFAGLTGD--ELVYDLYTGTGTIANFVAGQAHRVIGIEYVPEAIEDARTNSLLNGIENTLFYAGDMKDILTNDFIEQHGRPDVVITDPPRAGMHESVIDAILFAAPRRIVYVSCNPATQARDLALLM-------ADGRYRAVKSRPVDMFPHTHHVENVVLL 460          
The following BLAST results are available for this feature:
BLAST of CX069768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
Y643_BACTN9.148e-3848.60Uncharacterized RNA methyltransferase BT_0643 OS=B... [more]
Y728_ENTFA3.843e-3647.16Uncharacterized RNA methyltransferase EF_0728 OS=E... [more]
Y687_BACHD3.843e-3647.75Uncharacterized RNA methyltransferase BH0687 OS=Ba... [more]
Y363_BACC12.332e-3344.89Uncharacterized RNA methyltransferase BCE_0363 OS=... [more]
Y1941_CLOTE3.977e-3342.20Uncharacterized RNA methyltransferase CTC_01941 OS... [more]
Y1751_LISMO5.194e-3344.13Uncharacterized RNA methyltransferase lmo1751 OS=L... [more]
Y364_BACCR6.784e-3344.38Uncharacterized RNA methyltransferase BC_0364 OS=B... [more]
Y009_CHLTE6.784e-3346.37Uncharacterized RNA methyltransferase CT0009 OS=Ch... [more]
Y1776_LISMF8.860e-3344.13Uncharacterized RNA methyltransferase LMOf2365_177... [more]
Y1095_PORGI8.860e-3347.46Uncharacterized RNA methyltransferase PG_1095 OS=P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F09-L18-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069768 ID=CX069768; Name=CX069768; organism=Citrus sinensis; type=EST; length=753bp
GCTAATTAGACCGAATCAATCGAATTTCCAATTTTCAAATACTGTGTTTT
CTGCATGAATGAAGCTACAATTCAAAGAAATATAATCATGTAGCTGGAAA
TCACCCATCCAGATGTACAAATTAAAGATTACTGTCAGTTGGACCAGGAA
TAGCTTGGGCCCCTGCCAACCTAGTAGGAGTGCAGCAGCTAGCTTGGAAT
TGCAGCTTAAGGTCAAGAAAGTTCAAGTAGGCATACACATTCGATATGAG
GAGTGTGAGGGAACATATCTACTGGTTGTAAACTTTTTAGTTTATAACAT
CCCTTTATGTTTTGATCTCCCACACCATGACAAAGGTAATCAAGGTCACG
TGCACACGTGGCCGGATTACACGATACATAAACAATGCGTGGTGCCTTCA
GCTTTAGTAGGAACTTGATCAATTTCATGTGCATACCAGGGCGGTTTGGA
TCTGAAATGACAATGTCTGGCTTTGGAAAAGCATTGCCAAAATCTCCACC
AATTTTGTTGAGATCCCCTTGAACAAAAGTAGCATTAGAAATATTGTTCA
ACTTTGCATTTCTACAAGCATCTGATATAGCTTGAGGAACTACTTCATAT
CCATAAACATGTTTAACCCATCTTGCAAGTGTTAAACCAATGGTACCGGT
TCCACAAAATAGGTCAAGCACAATCTTGGAGCCATCACCTCTGAGACCAG
CACAATCTTCAATGAGTTTATAAAGAACCTCTGCCTGGTGAGTATTTGTC
TGG
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