CX069763

Overview
NameCX069763
Unique NameCX069763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX069763_ssr796 microsatellite CX069763_ssr796:796..810. BLAST: Citrus ESTs to Prunus persica proteins V1
CX069763_ssr701 microsatellite CX069763_ssr701:701..712. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX069763 vs. ExPASy Swiss-Prot
Match: ADO3_ARATH (Adagio protein 3 OS=Arabidopsis thaliana GN=ADO3 PE=1 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 1.041e-86
Identity = 159/196 (81.12%), Postives = 172/196 (87.76%), Query Frame = -3
Query:    3 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSP--LSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELT 584
            RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNF+KDGTPLVNRLRLAPIRDDDGT+TH+IGIQ+FSE  IDL+ VSYPVFK    QQ DQ+++      SP     H+D CGILQLSDEVLAHNILSRLTPRDVASIGS CRR+RQLTKNE VRKMVCQNAWG+E+TG LE+MTKKL WGRLARELT
Sbjct:   92 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIRDDDGTITHVIGIQVFSETTIDLDRVSYPVFKH--KQQLDQTSECLFPSGSPRFKEHHEDFCGILQLSDEVLAHNILSRLTPRDVASIGSACRRLRQLTKNESVRKMVCQNAWGKEITGTLEIMTKKLRWGRLARELT 285          
BLAST of CX069763 vs. ExPASy Swiss-Prot
Match: ADO3_ORYSJ (Adagio-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0547000 PE=2 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 1.666e-76
Identity = 142/195 (72.82%), Postives = 162/195 (83.08%), Query Frame = -3
Query:    3 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYD-QSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELT 584
            RFLQ+RDPRAQRRHPLVDP+VVSEIRRCL EGIEFQGELLNF+KDG PL NRLRL P+  DDG VTH+IGIQ+FSEA IDL++VSYPV+K+  N + + Q     S  H P  Q  + C ILQLSDEVLAHNILSRL+PRDVASIGSVC R+ +LTKN+H+RKMVCQNAWGR+VT  LE+ TK LGWGRLARELT
Sbjct:  103 RFLQFRDPRAQRRHPLVDPMVVSEIRRCLNEGIEFQGELLNFRKDGAPLYNRLRLIPMHGDDGFVTHVIGIQLFSEANIDLSNVSYPVYKQQSNHRPNIQEINPASHEHIPKIQSSEYCCILQLSDEVLAHNILSRLSPRDVASIGSVCTRMHELTKNDHLRKMVCQNAWGRDVTVRLEMSTKMLGWGRLARELT 297          
BLAST of CX069763 vs. ExPASy Swiss-Prot
Match: ADO1_ARATH (Adagio protein 1 OS=Arabidopsis thaliana GN=ADO1 PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 5.040e-57
Identity = 119/196 (60.71%), Postives = 142/196 (72.45%), Query Frame = -3
Query:    3 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELT 584
            RFLQ R P A+RRHPLVD +VVSEIR+C++EGIEFQGELLNF+KDG+PL+NRLRL PI  DD T+THIIGIQ F E  IDL  V     KE   +  D      + G   +S  + +CG+ QLSDEV++  ILSRLTPRDVAS+ SVCRR+  LTKNE + + VCQNAWG E T  LE +   K+LGWGRLARELT
Sbjct:   83 RFLQCRGPFAKRRHPLVDSMVVSEIRKCIDEGIEFQGELLNFRKDGSPLMNRLRLTPIYGDDDTITHIIGIQFFIETDIDLGPVLGSSTKE---KSIDGIYSALAAGERNVS--RGMCGLFQLSDEVVSMKILSRLTPRDVASVSSVCRRLYVLTKNEDLWRRVCQNAWGSETTRVLETVPGAKRLGWGRLARELT 273          
BLAST of CX069763 vs. ExPASy Swiss-Prot
Match: ADO1_ORYSJ (Adagio-like protein 1 OS=Oryza sativa subsp. japonica GN=Os06g0694000 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.285e-52
Identity = 107/199 (53.77%), Postives = 139/199 (69.85%), Query Frame = -3
Query:    3 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYF---SGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELT 584
            RFLQ R P AQRRHPLVD +VVSEIR+C++ G EF+G+LLNF+KDG+PL+N+L L PI  DD T+TH +GIQ F+ A +DL  +   + KE           +F   S G    +  ++   + QL+DEVL  +ILSRL+PRD+AS+ SVCRR+  LT+NE + +MVCQNAWG E T ALE +   K+LGWGRLARELT
Sbjct:   96 RFLQCRGPFAQRRHPLVDAMVVSEIRKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQFFTNANVDLGPLPGSLTKEPVRSTRFTPDNFFRPISTGPGQSNFCREYSSLFQLTDEVLCQSILSRLSPRDIASVSSVCRRLYLLTRNEDLWRMVCQNAWGSETTRALETVPAAKRLGWGRLARELT 294          
BLAST of CX069763 vs. ExPASy Swiss-Prot
Match: ADO2_ORYSJ (Putative adagio-like protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0150800 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.329e-49
Identity = 103/199 (51.76%), Postives = 135/199 (67.84%), Query Frame = -3
Query:    3 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQY---DQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELT 584
            RFLQ R P A+RRHPLVD  VV++IRRCLEEG  FQG+LLNF+KDG+P + +L+L PI  DD T+TH +G+Q F+++ +DL  +S    KE         D + +    G    S+H D   +  LSDEVL   ILSRL+PRD+AS+ SVC+R+  LT+N+ + +MVCQNAWG E T  LE +  T+ L WGRLARELT
Sbjct:   92 RFLQCRGPFAKRRHPLVDTTVVTDIRRCLEEGTVFQGDLLNFRKDGSPFMAKLQLTPIYGDDETITHYMGMQFFNDSNVDLGPLSVSTTKEIVRSTLITPDNTIRPSPMGKGFCSEHSD---LFLLSDEVLCQKILSRLSPRDIASVNSVCKRLYHLTRNDDLWRMVCQNAWGSEATQVLETVAGTRSLAWGRLARELT 287          
BLAST of CX069763 vs. ExPASy Swiss-Prot
Match: ADO2_ARATH (Adagio protein 2 OS=Arabidopsis thaliana GN=ADO2 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.736e-49
Identity = 103/199 (51.76%), Postives = 141/199 (70.85%), Query Frame = -3
Query:    3 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH---QDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELT 584
            RFLQ R P  +RRHP+VD  +V+++R+CLE GIEFQGELLNF+KDG+PL+N+LRL PIR++D  +TH IG+ +F++AKIDL        KE       + ++ F+    P+ +    + +CGI +LSDEV+A  ILS+LTP D+AS+G VCRR+ +LTKN+ V +MVCQN WG E T  LE +   K++GW RLARE T
Sbjct:   83 RFLQCRGPFTKRRHPMVDSTIVAKMRQCLENGIEFQGELLNFRKDGSPLMNKLRLVPIREED-EITHFIGVLLFTDAKIDLGPSPDLSAKE-----IPRISRSFTSA-LPIGERNVSRGLCGIFELSDEVIAIKILSQLTPGDIASVGCVCRRLNELTKNDDVWRMVCQNTWGTEATRVLESVPGAKRIGWVRLAREFT 274          
The following BLAST results are available for this feature:
BLAST of CX069763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ADO3_ARATH1.041e-8681.12Adagio protein 3 OS=Arabidopsis thaliana GN=ADO3 P... [more]
ADO3_ORYSJ1.666e-7672.82Adagio-like protein 3 OS=Oryza sativa subsp. japon... [more]
ADO1_ARATH5.040e-5760.71Adagio protein 1 OS=Arabidopsis thaliana GN=ADO1 P... [more]
ADO1_ORYSJ1.285e-5253.77Adagio-like protein 1 OS=Oryza sativa subsp. japon... [more]
ADO2_ORYSJ1.329e-4951.76Putative adagio-like protein 2 OS=Oryza sativa sub... [more]
ADO2_ARATH1.736e-4951.76Adagio protein 2 OS=Arabidopsis thaliana GN=ADO2 P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_12F06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F06-L12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069763 ID=CX069763; Name=CX069763; organism=Citrus sinensis; type=EST; length=877bp
GTTGTCAGCTCCCTAGCAAGACGGCCCCAGCCTAACTTCTTGGTCATCAA
TTCTAATGCACCTGTGACCTCTCGTCCCCATGCATTTTGACATACCATCT
TCCTTACATGTTCATTCTTTGTTAATTGGCGAATCCTTCTACACACAGAT
CCAATAGATGCTACATCTCTTGGTGTCAAGCGTGAGAGAATGTTGTGAGC
CAAAACTTCATCAGAGAGTTGAAGTATTCCACATATATCTTGATGCTGAC
TGAGAGGTGAATGTCCACCCGAAAAATATTGAGCTGACTGATCATACTGT
TGATTACAGTTCTCTTTAAATACTGGATAAGACACATGATTAAGATCTAT
CTTTGCTTCAGAAAAGATTTGAATACCAATTATGTGTGTTACAGTTCCAT
CATCATCACGTATGGGTGCAAGTCTAAGTCTGTTCACCAACGGGGTACCA
TCCTTCTTGAAGTTGAGTAGCTCCCCTTGGAATTCAATGCCTTCTTCAAG
ACATCTTCTGATCTCAGAAACAACAACAGGATCGACCAAAGGGTGCCGTC
TTTGAGCACGAGGATCCCGGTACTGTAAGAACCGACTAAACAGAAAGACA
AAGGCATACTCAGACAAAGTGGCTTCAAGAAACAAGATACAACACTTTCC
AATTGAAAGAAAAATACATCAATTTAATCCCTAAAGCAAGAAAAAATAAA
AAAGAAAGAAAGCAAGGAATTAGCTGACATCAAAATGTTACAAAAAAAGA
AAAAAAATAAATACTGAGAATATTTAAAGTTTTGTGCATACAACAATTAT
TATTATTATTTAAGAGATCAAAGTAGTGAAAGCACAGCGAGTACATTTGG
TAGGAGGAAAGAAAAAGAAAAGGAAAG
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