CX069749

Overview
NameCX069749
Unique NameCX069749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX069749 vs. ExPASy Swiss-Prot
Match: AHP6_ARATH (Histidine-containing phosphotransfer protein 6 OS=Arabidopsis thaliana GN=AHP6 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.090e-15
Identity = 37/48 (77.08%), Postives = 45/48 (93.75%), Query Frame = 1 
Query:  286 MDKEFSDYKKLGIHLNQMMGSSSSIGAKRVSNVCVAFRAASEQNNRAG 429
            MD+EFSDYKK+G+HLNQ++GSSSSIGA+RV NVCVAFR+ASE +NR G
Sbjct:   68 MDREFSDYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPG 115
The following BLAST results are available for this feature:
BLAST of CX069749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AHP6_ARATH6.090e-1577.08Histidine-containing phosphotransfer protein 6 OS=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_12E11_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12E11-J22-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069749 ID=CX069749; Name=CX069749; organism=Citrus sinensis; type=EST; length=862bp
TCAATTTTCATTTCATGTTACAATTTATCCTTATTAAACATTATGCTCTT
TCAGTCTGCTAAATGAAACAAACATATTATCAGAAATTCTTCGGTACCTC
CTGGATAATTTTGTAATGGTGCAATCTGGATAATGTGCCAATAAAAGAAA
ATATTCTTCTTTTGATATTTAATCTACAAACCACCATTGTCTCTCTCCCT
CTCAATTCATTTGAATTTTGAGTAGTAGTAAAATGCAGTTAATATTATTA
AATGAAAAATAAATGTGGTGGTGTGATGGGACAGGATGGATAAAGAGTTT
TCAGATTACAAGAAATTGGGAATCCATTTGAATCAGATGATGGGTAGCAG
CTCAAGCATTGGTGCCAAACGAGTCAGCAACGTTTGCGTTGCCTTTCGAG
CCGCTTCTGAACAGAATAACCGTGCTGGGTATTATTACTATTTTTTTCCC
TCGCCCTTTTCTTCTCTTTTCTCGAGCTTTCACATTCGGACAAAGAAAAT
AATCTTTTTATATCAAAATCTTGAATATTTTTGGAATAAAAAGTTACCAC
AATATCTGAACTCAGAATGAATTGAATCGATCAACCCTCAACTCGCATTT
GTAGGCTTTGTTAACGGCGTATTGTTTGGTTGCTATATATTTTCAGGTGC
TTGAGAGCTTTAGAGCTGCTAGAACATGAGTACTGCTACCTCAACAACAA
ATTCCATGAACTTTTCCAAGTAAAATACCAAGAATAACCTTTTTATATGT
TTATCTCGTGGGTATATAGTAGAATAAGCTGTATTTAAAATTAACTACAG
TGCTAAATCGTTTTGTGATTGTTACTTTATGGAACAGATAGAGCAACAGA
GAGAACTGGCAG
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