CX069734

Overview
NameCX069734
Unique NameCX069734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2005 contig Csv1_Contig2005:29..821. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.257e-48
Identity = 98/121 (80.99%), Postives = 103/121 (85.12%), Query Frame = -2
Query:  370 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIP 732
            MAKS FKQEHDL            KYPDRIPVIVEKAE+SDIP IDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP GA+MS++YEEKKD+DGFLYVTYSGENTFG   P
Sbjct:    1 MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGFGSP 121          
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.218e-45
Identity = 93/117 (79.49%), Postives = 98/117 (83.76%), Query Frame = -2
Query:  382 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 732
            MA+S FK EH L            KYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:    1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.218e-45
Identity = 93/117 (79.49%), Postives = 98/117 (83.76%), Query Frame = -2
Query:  382 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 732
            MA+S FK EH L            KYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:    1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.101e-44
Identity = 90/117 (76.92%), Postives = 97/117 (82.91%), Query Frame = -2
Query:  382 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 732
            MA S FK EH L            KYPDRIPVIVE+AERSD+PNIDKKKYLVPADLTVGQFVYV+RKRIKLSAEKAIF+FV N LPPT A+MSAIY+E KDEDGFLY+TYSGENTFG
Sbjct:    1 MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117          
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.878e-44
Identity = 89/118 (75.42%), Postives = 99/118 (83.90%), Query Frame = -2
Query:  379 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 732
            M+   F+Q+HD             KY DR+PVIVEK+E+SDIPNIDKKKYLVPADLTVGQFVYVIRKRI+LSAEKAIFIFVDNVLPPTGA+MS IY+E K+EDGFLYVTYSGENTFGS
Sbjct:    1 MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGS 118          
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.452e-44
Identity = 87/115 (75.65%), Postives = 98/115 (85.22%), Query Frame = -2
Query:  379 SYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 723
            S FK + D             KYPDRIPVIVEKAE+S++PNIDKKKYLVP+DLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTG +MS++YE+KKDEDGFLY+TYSGENTFG+
Sbjct:    5 SIFKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGA 119          
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.136e-44
Identity = 91/117 (77.78%), Postives = 96/117 (82.05%), Query Frame = -2
Query:  382 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 732
            MAKS FK +H L            KY DRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:    1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.136e-44
Identity = 91/117 (77.78%), Postives = 96/117 (82.05%), Query Frame = -2
Query:  382 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 732
            MAKS FK +H L            KY DRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:    1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.712e-43
Identity = 88/117 (75.21%), Postives = 97/117 (82.91%), Query Frame = -2
Query:  382 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 732
            MA S FK EH L            KYPDRIPVIVE+AE+SD+P+ID+KKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N+LPPT AIMSAIYEE KDEDGFLY++YSGENTFG
Sbjct:    1 MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117          
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.346e-42
Identity = 88/118 (74.58%), Postives = 96/118 (81.36%), Query Frame = -2
Query:  379 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 732
            MAKS FK  + L            KYPDRIPVIVEKA +SD+P+IDKKKYLVPADLTVGQFVYV+RKRIKL AEKAIF+FV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFGS
Sbjct:    1 MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118          
The following BLAST results are available for this feature:
BLAST of CX069734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8F_ARATH1.257e-4880.99Autophagy-related protein 8f OS=Arabidopsis thalia... [more]
ATG8C_ORYSJ2.218e-4579.49Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ORYSI2.218e-4579.49Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ARATH1.101e-4476.92Autophagy-related protein 8c OS=Arabidopsis thalia... [more]
ATG8G_ARATH1.878e-4475.42Autophagy-related protein 8g OS=Arabidopsis thalia... [more]
ATG8E_ARATH2.452e-4475.65Autophagy-related protein 8e OS=Arabidopsis thalia... [more]
ATG8B_ORYSJ7.136e-4477.78Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI7.136e-4477.78Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8D_ARATH2.712e-4375.21Autophagy-related protein 8d OS=Arabidopsis thalia... [more]
ATG8A_ARATH1.346e-4274.58Autophagy-related protein 8a OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12E03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12E03-J6-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069734 ID=CX069734; Name=CX069734; organism=Citrus sinensis; type=EST; length=793bp
CTTTTTTTTTACTTCTAATAAGTTGGTCAAATTTACATCTTAAAAATAGC
AATGGCTCACAAACACGCCGAATCCGGGTTCCAAGTCAAGTATTTCGTGA
TAAAGATTACAGATTGAAACCAGCAGCAAATACCCAAACCGAAAAAAAAT
CATCAAAATAGAAAGGCAAGAAAGAAACTTGACATATTATGCCTTTAAGA
CTTATATACAATAGGTAACTGTACATATTATCACTGGCAATGTCTTTATA
AAATATAAAATATGCCCGATAAAGGAATATTCAGCGGAAAGCAAGGATGA
CAATTGAGATAAAAATGCGGTCGCACAAGAAACCACACAATGAGCAGATA
GATAATCACAAGGCTAAACTGGGATGTGGCTTCCAAATGTGTTCTCCCCA
CTGTAAGTCACATAAAGAAAACCATCTTCATCCTTTTTCTCTTCGTATAT
GGCAGACATAATTGCACCTGTAGGTGGGAGCACATTATCCACAAAAATAA
ATATCGCCTTTTCAGCACTCAGTTTGATCCTTTTACGGATGACATAGACA
AATTGTCCTACAGTCAGGTCAGCTGGAACAAGATACTTCTTCTTATCTAT
ATTTGGTATGTCACTTCTCTCTGCCTTCTCCACAATCACCGGAATCCTGT
CAGGGTACTTCTCCCTAATCCTTGCAGCCTCTGCGCGTCTCTTCTCAAGA
TCATGCTCTTGCTTGAAGTAACTCTTTGCCATTCCTCCTTGTGAAGAGTC
GAAGCGAAGAAGCGAGAGGAAAAAAAAACAGAAAAGAGCCCTC
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