CX069718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_CITSI (30S ribosomal protein S11, chloroplastic OS=Citrus sinensis GN=rps11 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.372e-30 Identity = 69/81 (85.19%), Postives = 69/81 (85.19%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_GOSHI (30S ribosomal protein S11, chloroplastic OS=Gossypium hirsutum GN=rps11 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.563e-29 Identity = 68/81 (83.95%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIRAV DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_GOSBA (30S ribosomal protein S11, chloroplastic OS=Gossypium barbadense GN=rps11 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.563e-29 Identity = 68/81 (83.95%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIRAV DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_CARPA (30S ribosomal protein S11, chloroplastic OS=Carica papaya GN=rps11 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.563e-29 Identity = 68/81 (83.95%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIRAV DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_LOTJA (30S ribosomal protein S11, chloroplastic OS=Lotus japonicus GN=rps11 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.041e-29 Identity = 67/81 (82.72%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KG+IHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIR VADQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGIIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVADQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_SOYBN (30S ribosomal protein S11, chloroplastic OS=Glycine max GN=rps11 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.482e-29 Identity = 67/81 (82.72%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIR V+DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVSDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_POPTR (30S ribosomal protein S11, chloroplastic OS=Populus trichocarpa GN=rps11 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29 Identity = 67/81 (82.72%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGACGFRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_POPAL (30S ribosomal protein S11, chloroplastic OS=Populus alba GN=rps11 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29 Identity = 67/81 (82.72%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGACGFRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_MORIN (30S ribosomal protein S11, chloroplastic OS=Morus indica GN=rps11 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29 Identity = 67/81 (82.72%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTKRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_EUCGG (30S ribosomal protein S11, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rps11 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29 Identity = 67/81 (82.72%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFNGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107 The following BLAST results are available for this feature:
BLAST of CX069718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069718 ID=CX069718; Name=CX069718; organism=Citrus sinensis; type=EST; length=887bpback to top |