CX069716

Overview
NameCX069716
Unique NameCX069716
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3716 contig Csv1_Contig3716:1119..1988. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069716 vs. ExPASy Swiss-Prot
Match: UGPA_PYRPY (UTP--glucose-1-phosphate uridylyltransferase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 3.012e-86
Identity = 160/185 (86.49%), Postives = 170/185 (91.89%), Query Frame = -1
Query:  316 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATFDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKFGEKLEIPDGAVLENKEINGPGDL 870
            SIEKFKIFNTNNLWVNL AIKRLVEADALKMEIIPNPKEVDG+KVLQLETAAGAAIRFF+HAIG NV RSRFLPVKAT DLLLVQSDLYTL DGFVTRN ARKNP NPTIELGPEFKKVG++LSRFKSIPSI+EL+SLKV+GDVWFGA + LKGKVTI AK G KLEIPD AV+ NK+INGP DL
Sbjct:  287 SIEKFKIFNTNNLWVNLNAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFNHAIGINVPRSRFLPVKATSDLLLVQSDLYTLQDGFVTRNSARKNPENPTIELGPEFKKVGSYLSRFKSIPSILELESLKVSGDVWFGAGVVLKGKVTITAKSGVKLEIPDNAVIANKDINGPEDL 471          
BLAST of CX069716 vs. ExPASy Swiss-Prot
Match: UGPA2_ARATH (Probable UTP--glucose-1-phosphate uridylyltransferase 2 OS=Arabidopsis thaliana GN=At3g03250 PE=1 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.495e-85
Identity = 159/185 (85.95%), Postives = 172/185 (92.97%), Query Frame = -1
Query:  316 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATFDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKFGEKLEIPDGAVLENKEINGPGDL 870
            SIEKFKIFNTNNLWVNLKAIK+LVEADALKMEIIPNPKEVDG+KVLQLETAAGAAIRFFD+AIG NV RSRFLPVKA+ DLLLVQSDLYTL DGFVTRN+AR NP+NP+IELGPEFKKV  FLSRFKSIPSI+ELDSLKV+GDVWFG++I LKGKVT+AAK G KLEIPD AV+ENK INGP DL
Sbjct:  285 SIEKFKIFNTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKASSDLLLVQSDLYTLVDGFVTRNKARTNPSNPSIELGPEFKKVATFLSRFKSIPSIVELDSLKVSGDVWFGSSIVLKGKVTVAAKSGVKLEIPDRAVVENKNINGPEDL 469          
BLAST of CX069716 vs. ExPASy Swiss-Prot
Match: UGPA1_ARATH (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana GN=At5g17310 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.952e-85
Identity = 158/185 (85.41%), Postives = 169/185 (91.35%), Query Frame = -1
Query:  316 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATFDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKFGEKLEIPDGAVLENKEINGPGDL 870
            SIEKFKIFNTNNLWVNLKAIK+LVEADALKMEIIPNPKEVDG+KVLQLETAAGAAIRFFD+AIG NV RSRFLPVKAT DLLLVQSDLYTL DGFVTRN+AR NP NP IELGPEFKKV +FLSRFKSIPSI+ELDSLKV+GDVWFG+ + LKGKVT+ A  G KLEIPD AVLENK+INGP DL
Sbjct:  286 SIEKFKIFNTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKATSDLLLVQSDLYTLVDGFVTRNKARTNPTNPAIELGPEFKKVASFLSRFKSIPSIVELDSLKVSGDVWFGSGVVLKGKVTVKANAGTKLEIPDNAVLENKDINGPEDL 470          
BLAST of CX069716 vs. ExPASy Swiss-Prot
Match: UGPA_MUSAC (UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 5.680e-85
Identity = 159/185 (85.95%), Postives = 168/185 (90.81%), Query Frame = -1
Query:  316 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATFDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKFGEKLEIPDGAVLENKEINGPGDL 870
            SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDG+KVLQLETAAGAAIRFFDHAIG NV RSRFLPVKAT DLLLVQSDLY L DGFV RN+AR NP+NP+IELGPEFKKV NFLSRFKSIPSI+ELDSLKV+GDVWFG  + LKG V+IAAK G KLEI DGAVLENK INGP D+
Sbjct:  283 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDHAIGINVPRSRFLPVKATSDLLLVQSDLYMLVDGFVIRNKARTNPSNPSIELGPEFKKVANFLSRFKSIPSIVELDSLKVSGDVWFGEGVVLKGNVSIAAKSGVKLEISDGAVLENKVINGPEDI 467          
BLAST of CX069716 vs. ExPASy Swiss-Prot
Match: UGPA_SOLTU (UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum PE=1 SV=3)

HSP 1 Score: 311.227 bits (796), Expect = 4.808e-84
Identity = 157/186 (84.41%), Postives = 169/186 (90.86%), Query Frame = -1
Query:  316 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATFDLLLVQSDLYTLAD-GFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKFGEKLEIPDGAVLENKEINGPGDL 870
            SIEKFKIFNTNNLWVNL AIKRLVEADALKMEIIPNPKEVDG+KVLQLETAAGAAI+FFD AIG NV RSRFLPVKAT DLLLVQSDLYTL D G+V RN AR NP+NP+IELGPEFKKV NFL RFKSIPSII+LDSLKVTGDVWFG+ +TLKGKVT+AAK G KLEIPDGAV+ NK+INGP D+
Sbjct:  292 SIEKFKIFNTNNLWVNLSAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIKFFDRAIGANVPRSRFLPVKATSDLLLVQSDLYTLTDEGYVIRNPARSNPSNPSIELGPEFKKVANFLGRFKSIPSIIDLDSLKVTGDVWFGSGVTLKGKVTVAAKSGVKLEIPDGAVIANKDINGPEDI 477          
BLAST of CX069716 vs. ExPASy Swiss-Prot
Match: UGPA_ASTPN (UTP--glucose-1-phosphate uridylyltransferase OS=Astragalus penduliflorus GN=UGP PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 1.184e-82
Identity = 155/185 (83.78%), Postives = 165/185 (89.19%), Query Frame = -1
Query:  316 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATFDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKFGEKLEIPDGAVLENKEINGPGDL 870
            SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDG+KVLQLETAAGAAIRFFD AIG NV RSRFLPVKAT DLLLVQSDLYT+ +G V RN+AR NP NP+IELGPEFKKV NFL RFKSIPSI+ELDSLKV GDVWFG  + LKGKV+I AK G K+EIPDGAV+ NKEINGP DL
Sbjct:  287 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDKAIGINVPRSRFLPVKATSDLLLVQSDLYTVENGSVIRNKARTNPENPSIELGPEFKKVSNFLGRFKSIPSIVELDSLKVVGDVWFGTGVILKGKVSIVAKSGVKVEIPDGAVIANKEINGPKDL 471          
BLAST of CX069716 vs. ExPASy Swiss-Prot
Match: UGPA_HORVU (UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 4.501e-82
Identity = 154/185 (83.24%), Postives = 168/185 (90.81%), Query Frame = -1
Query:  316 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATFDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKFGEKLEIPDGAVLENKEINGPGDL 870
            SIEKFKIFNTNNLWVNLKAIKRLV+A+ALKMEIIPNPKEVDG+KVLQLETAAGAAIRFF+ AIG NV RSRFLPVKAT DLLLVQSDLYTL DG+V RN AR  P+NP+IELGPEFKKV NFL+RFKSIPSI+ELDSLKV+GDV FG+ + LKG VTIAAK G KLEIPDGAVLENK+INGP D+
Sbjct:  289 SIEKFKIFNTNNLWVNLKAIKRLVDAEALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFEKAIGINVPRSRFLPVKATSDLLLVQSDLYTLVDGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKVSGDVSFGSGVVLKGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 473          
BLAST of CX069716 vs. ExPASy Swiss-Prot
Match: UGPA_CRIGR (UTP--glucose-1-phosphate uridylyltransferase OS=Cricetulus griseus GN=UGP2 PE=2 SV=3)

HSP 1 Score: 209.149 bits (531), Expect = 2.573e-53
Identity = 105/182 (57.69%), Postives = 140/182 (76.92%), Query Frame = -1
Query:  328 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDG-IKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATFDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKFGEKLEIPDGAVLENKEING 870
            S+ KFKIFNTNNLW++L A+KRL E +A+ MEII NPK +DG + V+QLETA GAAI+ F++++G NV RSRFLPVK T DLLLV S+LY+L  G +T +E R+ P  P ++LG  F KV ++L RF+SIP ++ELD L V+GDV FG N++LKG V I A  G++++IP GAVLENK ++G
Sbjct:  320 SVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNPKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENKIVSG 501          
BLAST of CX069716 vs. ExPASy Swiss-Prot
Match: UGPA_BOVIN (UTP--glucose-1-phosphate uridylyltransferase OS=Bos taurus GN=UGP2 PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.573e-53
Identity = 105/182 (57.69%), Postives = 140/182 (76.92%), Query Frame = -1
Query:  328 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDG-IKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATFDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKFGEKLEIPDGAVLENKEING 870
            S+ KFKIFNTNNLW++L A+KRL E +A+ MEII NPK +DG + V+QLETA GAAI+ F++++G NV RSRFLPVK T DLLLV S+LY+L  G +T +E R+ P  P ++LG  F KV ++L RF+SIP ++ELD L V+GDV FG N++LKG V I A  G++++IP GAVLENK ++G
Sbjct:  320 SVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNPKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENKIVSG 501          
BLAST of CX069716 vs. ExPASy Swiss-Prot
Match: UGPA_MOUSE (UTP--glucose-1-phosphate uridylyltransferase OS=Mus musculus GN=Ugp2 PE=2 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 3.361e-53
Identity = 105/182 (57.69%), Postives = 140/182 (76.92%), Query Frame = -1
Query:  328 SIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDG-IKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATFDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKFGEKLEIPDGAVLENKEING 870
            S+ KFKIFNTNNLW++L A+KRL E +A+ MEII NPK +DG + V+QLETA GAAI+ F++++G NV RSRFLPVK T DLLLV S+LY+L  G +T +E R+ P  P ++LG  F KV ++L RF+SIP ++ELD L V+GDV FG N++LKG V I A  G++++IP GAVLENK ++G
Sbjct:  320 SVSKFKIFNTNNLWISLGAVKRLQEQNAIDMEIIVNPKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENKIVSG 501          
The following BLAST results are available for this feature:
BLAST of CX069716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
UGPA_PYRPY3.012e-8686.49UTP--glucose-1-phosphate uridylyltransferase OS=Py... [more]
UGPA2_ARATH1.495e-8585.95Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA1_ARATH1.952e-8585.41UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA_MUSAC5.680e-8585.95UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
UGPA_SOLTU4.808e-8484.41UTP--glucose-1-phosphate uridylyltransferase OS=So... [more]
UGPA_ASTPN1.184e-8283.78UTP--glucose-1-phosphate uridylyltransferase OS=As... [more]
UGPA_HORVU4.501e-8283.24UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]
UGPA_CRIGR2.573e-5357.69UTP--glucose-1-phosphate uridylyltransferase OS=Cr... [more]
UGPA_BOVIN2.573e-5357.69UTP--glucose-1-phosphate uridylyltransferase OS=Bo... [more]
UGPA_MOUSE3.361e-5357.69UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12D04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12D04-H8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069716 ID=CX069716; Name=CX069716; organism=Citrus sinensis; type=EST; length=870bp
TTTTTTTTTTTTTTTTTCAACAAGTAACCACTCTACTCTTTCATCATTAT
TATTCAACCCACTTAACGGAAATGATACAAGGGGCAAGGTTTTGCAGTTG
CATATTGCAATATTCATCATGTTATATATTTAGTTATAAAGTCTGAAATA
GTTACTGAAGCAACCGCTACATTGTAAAGATCGATGAAATAAAAAATTAA
TACAAAATAAAATTTGGAATGAAATCCAACATCAAGCAAAACAAGACTCA
TCCTCAAGGTTCAAGATAAGCACTGAGCAAACCTCTCCGACTAGTAATCT
ACAGCATGTTCCTTACAGATCCCCGGGGCCATTGATCTCCTTGTTTTCAA
GTACAGCTCCATCAGGAATTTCCAGTTTCTCCCCAAATTTGGCAGCAATA
GTCACTTTCCCCTTGAGGGTAATATTAGCACCAAACCATACGTCACCGGT
CACCTTAAGGCTATCAAGCTCGATGATACTAGGAATAGACTTGAATCGGC
TCAAAAAGTTGCCAACCTTCTTAAATTCAGGTCCCAGTTCAATAGTTGGA
TTTGCAGGGTTTTTTCTAGCTTCATTCCGAGTAACAAATCCATCGGCCAA
GGTGTAAAGATCAGACTGGACAAGAAGCAGATCAAAAGTTGCCTTCACCG
GAAGGAATCGAGATCGATGTACGTTACAACCAATAGCATGATCAAAGAAC
CGAATTGCAGCACCAGCTGCAGTTTCTAGCTGAAGAACTTTGATTCCATC
CACTTCCTTTGGATTTGGAATGATCTCCATCTTAAGTGCATCAGCTTCCA
CTAACCTTTTGATTGCCTTCAAGTTCACCCATAAGTTATTCGTGTTGAAA
ATTTTGAACTTCTCTATTGA
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