CX069706

Overview
NameCX069706
Unique NameCX069706
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 5.067e-59
Identity = 99/131 (75.57%), Postives = 118/131 (90.08%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGRTDPNQNTGT+IH CTIR ++DLA+ + TV+TYLGRPWKEYSRTV MQT++D  + P+GW+ WSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYH+I+AT+A+NFTV+NFL G+ W+ QTGVP+ GG
Sbjct:  427 AQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVINATDASNFTVTNFLVGEGWIGQTGVPFVGG 557          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 3.399e-55
Identity = 92/131 (70.23%), Postives = 112/131 (85.50%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGRTDPNQNTG SIHNCTI+ ++DL S + TV+TYLGRPWKEYSRTV+MQ+++D ++ P GW +W+GDFALSTLYYAEYNNTG GS TT+RV WPGYH+I++T+A NFTV NFL GD W+ Q+GVPY  G
Sbjct:  440 AQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVINSTDANNFTVENFLLGDGWMVQSGVPYISG 570          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.203e-54
Identity = 91/131 (69.47%), Postives = 112/131 (85.50%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGR+DPNQNTGTSI NCTI+ ++DL S + TV+TYLGRPWKEYSRTVYMQ+++D  + P GW +W+GDFALSTLYYAEYNNTGPGS+TTNRVTWPGYH+I++T+AANFTV+      +W+ +TGVPY  G
Sbjct:  446 AQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINSTDAANFTVTGLFIEADWIWKTGVPYTSG 576          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.209e-49
Identity = 84/132 (63.64%), Postives = 108/132 (81.82%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDA-TEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGRTDPNQ+TG  IHNC + A++DL     +V+T+LGRPWK+YSRTVY++TF+DSLINPAGW +WSGDFAL+TLYYAEY NTGPGS T NRV W GYH++ + ++ + FTV NF++G++WLP T VP+  G
Sbjct:  378 AQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSG 509          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.684e-43
Identity = 73/131 (55.73%), Postives = 97/131 (74.05%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            A GR DPNQNTG SI NCTI+A+ DLA+  ++  T+LGRPWK YSRTV+MQ+++  ++ P GW +W+G   L T+YY EY+N GPG++T  RV W GY++++  EA NFTV NF  GD WLPQT +P+ GG
Sbjct:  484 AHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLLNLAEAMNFTVYNFTMGDTWLPQTDIPFYGG 614          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.527e-42
Identity = 79/132 (59.85%), Postives = 95/132 (71.97%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAA-NFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGRTDPNQNTGTSI NC I AS DL     T ++YLGRPWKEYSRTV M++++  +I+PAGW +W  DFAL TL+Y EY N GPGS T+ RV WPGYH+I + E A  FTV+  + G +WL  TGV Y  G
Sbjct:  411 AQGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAG 542          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.629e-42
Identity = 79/128 (61.72%), Postives = 95/128 (74.22%), Query Frame = -2
Query:  458 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHI-IDATEAANFTVSNFLSGDNWLPQTGVP 838
            AQGR DPNQNTG SI NC + A+ DL     + +TYLGRPWKEYSRTV++ + M+SLI+PAGW +WSGDFAL+TLYY EY NTGPGS+TT RVTWPGY +  + TE   FTV NF+ G  WL    +P
Sbjct:  188 AQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPGYAVTTNETEVIQFTVGNFIQGSQWLTSYNIP 315          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.793e-41
Identity = 72/131 (54.96%), Postives = 95/131 (72.52%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            A GRTDPNQ TG SI NCTI A+ DLA+  ++  T+LGRPWK YSRTVY+Q+++  ++ P GW +W+G   L T+ Y EY+N GPG+DT+ RV W GY +++  +A NFTV NF  GD WLPQT +P+ GG
Sbjct:  489 AHGRTDPNQKTGISIINCTIGAAPDLAADPKSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLLNLVQAMNFTVYNFTLGDTWLPQTDIPFYGG 619          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 169.088 bits (427), Expect = 2.793e-41
Identity = 79/132 (59.85%), Postives = 94/132 (71.21%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGRTDPNQ TGTSI  C I AS+DL    +   TYLGRPWKEYSRTV M++++  LINPAGW +W GDFAL TLYY E+ N GPG+ T+ RV WPGYH+I D  +A  FTV+  + G +WL  TGV Y  G
Sbjct:  412 AQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDG 543          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 4.765e-41
Identity = 74/132 (56.06%), Postives = 102/132 (77.27%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGR+DPNQNTG  IHN  + A++DL     + +TYLGRPW++YSRTV+M+T +DSLI+P GW +W G+FAL TL+YAE+ NTGPG+ T+ RVTWPG+ ++  A+EA+ FTV  FL+G +W+P + VP+  G
Sbjct:  380 AQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIP-SSVPFTSG 510          
The following BLAST results are available for this feature:
BLAST of CX069706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PME20_ARATH5.067e-5975.57Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME41_ARATH3.399e-5570.23Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME7_ARATH2.203e-5469.47Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME2_CITSI6.209e-4963.64Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME25_ARATH8.684e-4355.73Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME1_FICAW2.527e-4259.85Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME_ACTDE5.629e-4261.72Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME47_ARATH2.793e-4154.96Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME1_SOLLC2.793e-4159.85Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME17_ARATH4.765e-4156.06Probable pectinesterase/pectinesterase inhibitor 1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_12C09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C09-F18-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069706 ID=CX069706; Name=CX069706; organism=Citrus sinensis; type=EST; length=839bp
CTCGAGAGCCAAAAATTTCTTCTTCAAATGGGCTATTTGCGCATATGTGT
TAACAATAAAACGTTAACAGAATTAGGATTAATTGTTGACAAACTTTAAT
ATTTGTTACCAGAATGATAGAGTTGTGCAAAATTTAGGAAATAAGTAGCA
TAATAAAAAGCAGTAGGGACGATTCACTGTTGCGGATATTTCATCATCAA
TTTCGATAACAACATTATTTAAACATCTTAGTCATTGGAGTACTTCTACT
GCAAAAAAGTTAAAAATAAAAAAAATACAATAGCAGTTCAAATATTAAAT
TTATTGTCAATACAATTGTACATTTGAATAGCTTGTGTATCACACATGAT
TATTGAGTTTGCAAAGCAATTTCCCAAAAAAAAAAAACCGACGAACAGGA
AGCTTCACAAGATGAGTAGCTTAATTAAAAAAATTAACTAATGAAACCAC
CGTTGTAAGGCACTCCAGTTTGCGGTAACCAATTGTCCCCAGACAAGAAA
TTAGAAACGGTGAAATTAGCGGCTTCTGTGGCATCGATGATATGGTAACC
CGGCCAAGTCACCCTATTGGTGGTGTCTGACCCTGGGCCGGTATTATTGT
ACTCGGCATAATACAATGTAGATAGTGCAAAATCGCCGCTCCAATCGTGC
CAACCAGCAGGGTTTATCAAACTATCCATGAAAGTTTGCATGTAAACAGT
TCTAGAGTACTCCTTCCATGGCCTCCCCAGATATGTCTGCACCGTTTGAC
TGCCCGACGCCAGATCATTGGATGCTCTAATTGTGCAATTATGGATGGAC
GTGCCGGTATTCTGGTTAGGATCGGTCCTACCTTGTGCT
back to top