DR403991

Overview
NameDR403991
Unique NameDR403991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length645
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8932 contig Csv1_Contig8932:57..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: ZB14_MAIZE (14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.737e-50
Identity = 68/82 (82.93%), Postives = 77/82 (93.90%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P+ ILIIPKVKDGLTGL+KAEERH EILG LLY AK+VAKQEGLEDG+R+VINDGP+G QSV+HIHVHLLGGRQMNWPPG
Sbjct:   47 QAPTHILIIPKVKDGLTGLAKAEERHIEILGYLLYVAKVVAKQEGLEDGYRVVINDGPSGCQSVYHIHVHLLGGRQMNWPPG 128          

HSP 2 Score: 74.3294 bits (181), Expect = 1.737e-50
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 3
Query:   66 MASENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAP 215
            M+SE EAA+  +  DSPTIFDKII KEIPS VVYED+KVLAFRDI+PQAP
Sbjct:    1 MSSEKEAALRRL-DDSPTIFDKIIKKEIPSTVVYEDEKVLAFRDINPQAP 49          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: ZB14_BRAJU (14 kDa zinc-binding protein (Fragment) OS=Brassica juncea PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.500e-45
Identity = 67/82 (81.71%), Postives = 75/82 (91.46%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            + P  IL+IPKV+DGLTGL KAEERH +ILGRLLYTAKLVAKQEGL++GFRIVINDGP G QSV+HIHVHL+GGRQMNWPPG
Sbjct:   32 QGPVHILLIPKVRDGLTGLFKAEERHIDILGRLLYTAKLVAKQEGLDEGFRIVINDGPQGCQSVYHIHVHLIGGRQMNWPPG 113          

HSP 2 Score: 58.5362 bits (140), Expect = 4.500e-45
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 3
Query:  117 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAP 215
            TIF KII+KEIPS VVYEDDKVLAFRDI PQ P
Sbjct:    2 TIFGKIISKEIPSTVVYEDDKVLAFRDITPQGP 34          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: Y1390_SYNE7 (Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_1390 PE=4 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.632e-28
Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P  IL+IPK    +  L +A   H  +LG LL T K +A QEGL +G+R VIN GP GGQ+V+H+H+HLLGGR + WPPG
Sbjct:   35 QAPVHILVIPK--QPIANLLEATAEHQALLGHLLLTVKAIAAQEGLTEGYRTVINTGPAGGQTVYHLHIHLLGGRSLAWPPG 114          

HSP 2 Score: 51.6026 bits (122), Expect = 7.632e-28
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 3
Query:  117 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAP 215
            TIF KII +EIP+ +VYEDD  LAFRD+ PQAP
Sbjct:    5 TIFGKIIRREIPADIVYEDDLCLAFRDVAPQAP 37          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HINT2_MOUSE (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Mus musculus GN=Hint2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.938e-27
Identity = 40/82 (48.78%), Postives = 61/82 (74.39%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P   L+IP+    +  +S+AEE   ++LG LL  AK +A+ +GL+DG+R+V+NDG  G QSV+H+H+H+LGGRQ+ WPPG
Sbjct:   84 QAPVHFLVIPRKP--IPRISQAEEDDQQLLGHLLLVAKKIAQAQGLKDGYRLVVNDGKMGAQSVYHLHIHVLGGRQLQWPPG 163          

HSP 2 Score: 49.6766 bits (117), Expect = 7.938e-27
Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 3
Query:   81 EAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAP 215
            +A  AA    SPTIF +I+++ +P+ ++YED + L FRD+ PQAP
Sbjct:   42 KAQKAAPGGASPTIFSRILDRSLPADILYEDQQCLVFRDVAPQAP 86          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: YHIT_SYNY3 (Uncharacterized HIT-like protein slr1234 OS=Synechocystis sp. (strain PCC 6803) GN=slr1234 PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.238e-23
Identity = 40/82 (48.78%), Postives = 53/82 (64.63%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P  +L+IPK    L  LS A      +LG LL  AK VA   G+ D FR+VIN+G   GQ+VFH+H+H+LGGR  +WPPG
Sbjct:   35 QAPVHVLLIPKKP--LPQLSAATPEDHALLGHLLLKAKEVAADLGIGDQFRLVINNGAEVGQTVFHLHLHILGGRPFSWPPG 114          

HSP 2 Score: 51.9878 bits (123), Expect = 2.238e-23
Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 3
Query:  117 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAP 215
            TIF KII +EIP+ +VYEDD  LAF+D++PQAP
Sbjct:    5 TIFSKIIRREIPAAIVYEDDLCLAFKDVNPQAP 37          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: YHIT_AQUAE (Uncharacterized HIT-like protein aq_141 OS=Aquifex aeolicus GN=aq_141 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.952e-21
Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 2
Query:  203 SPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQ------EGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            +P  ILIIPK    + G+   E     ++G + Y A+ +A+       E L  G+R+V N G + GQSVFH+H+HL+GGR+M+WPPG
Sbjct:   37 APVHILIIPKKH--IMGIQTLEPEDECLVGHMFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSVFHLHLHLIGGREMSWPPG 121          

HSP 2 Score: 48.521 bits (114), Expect = 1.952e-21
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 3
Query:  120 IFDKIINKEIPSKVVYEDDKVLAFRDIDPQAP 215
            IF KI+  E+P+K VYEDDKVLAF DI+P AP
Sbjct:    7 IFCKIVRGEVPAKKVYEDDKVLAFHDINPVAP 38          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HINT_SHIFL (HIT-like protein hinT OS=Shigella flexneri GN=hinT PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.564e-21
Identity = 33/78 (42.31%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 430
            ++P+ ILIIP +   +  ++     H + LGR++  A  +A+QEG+ EDG+R+++N   +GGQ V+HIH+HLLGGR +
Sbjct:   35 QAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110          

HSP 2 Score: 53.1434 bits (126), Expect = 2.564e-21
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 3
Query:  117 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAP 215
            TIF KII +EIPS +VY+DD V AFRDI PQAP
Sbjct:    5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAP 37          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HINT_ECOLI (HIT-like protein hinT OS=Escherichia coli (strain K12) GN=hinT PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.564e-21
Identity = 33/78 (42.31%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 430
            ++P+ ILIIP +   +  ++     H + LGR++  A  +A+QEG+ EDG+R+++N   +GGQ V+HIH+HLLGGR +
Sbjct:   35 QAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110          

HSP 2 Score: 53.1434 bits (126), Expect = 2.564e-21
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 3
Query:  117 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAP 215
            TIF KII +EIPS +VY+DD V AFRDI PQAP
Sbjct:    5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAP 37          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HINT_ECO57 (HIT-like protein hinT OS=Escherichia coli O157:H7 GN=hinT PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.564e-21
Identity = 33/78 (42.31%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 430
            ++P+ ILIIP +   +  ++     H + LGR++  A  +A+QEG+ EDG+R+++N   +GGQ V+HIH+HLLGGR +
Sbjct:   35 QAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110          

HSP 2 Score: 53.1434 bits (126), Expect = 2.564e-21
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 3
Query:  117 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAP 215
            TIF KII +EIPS +VY+DD V AFRDI PQAP
Sbjct:    5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAP 37          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HINT2_HUMAN (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Homo sapiens GN=HINT2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.507e-19
Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P   L+IPK    +  +S+AEE   ++LG LL  AK  AK EGL DG+R+VINDG  G QSV+H+H+H+LGGRQ+ WPPG
Sbjct:   84 QAPVHFLVIPKKP--IPRISQAEEEDQQLLGHLLLVAKQTAKAEGLGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 163          
The following BLAST results are available for this feature:
BLAST of DR403991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
ZB14_MAIZE1.737e-5082.9314 kDa zinc-binding protein OS=Zea mays GN=ZBP14 P... [more]
ZB14_BRAJU4.500e-4581.7114 kDa zinc-binding protein (Fragment) OS=Brassica... [more]
Y1390_SYNE77.632e-2852.44Uncharacterized HIT-like protein Synpcc7942_1390 O... [more]
HINT2_MOUSE7.938e-2748.78Histidine triad nucleotide-binding protein 2, mito... [more]
YHIT_SYNY32.238e-2348.78Uncharacterized HIT-like protein slr1234 OS=Synech... [more]
YHIT_AQUAE1.952e-2142.53Uncharacterized HIT-like protein aq_141 OS=Aquifex... [more]
HINT_SHIFL2.564e-2142.31HIT-like protein hinT OS=Shigella flexneri GN=hinT... [more]
HINT_ECOLI2.564e-2142.31HIT-like protein hinT OS=Escherichia coli (strain ... [more]
HINT_ECO572.564e-2142.31HIT-like protein hinT OS=Escherichia coli O157:H7 ... [more]
HINT2_HUMAN5.507e-1953.66Histidine triad nucleotide-binding protein 2, mito... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O22 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403991 ID=DR403991; Name=DR403991; organism=Citrus sinensis; type=EST; length=645bp
GGGGGAATATTTCAAGCACAATCAGCCGACTTGCAGTGCTGACGTCTCAT
TTGTCTGCCGTCGTCATGGCTTCAGAGAACGAGGCTGCTGTTGCAGCCGT
TCCTTCTGATTCGCCTACCATATTTGACAAAATAATTAACAAAGAAATCC
CATCTAAAGTTGTTTATGAGGATGATAAGGTCTTAGCCTTTAGGGACATA
GATCCCCAAGCTCCATTCTAATTATTCCCAAAGTGAAGGATGGCTTGACT
GGACTTTCAAAGGCCGAGGAAAGGCATTGCGAAATTCTTGGCCGCCTTCT
TTACACTGCTAAGCTTGTTGCTAAACAGGAAGGACTAGAAGACGGCTTTA
GGATTGTGATTAATGATGGGCCAAATGGAGGTCAATCAGTTTTTCACATC
CACGTCCACCTCCTAGGAGGACGACAAATGAACTGGCCCCCGGGCTAAGA
TGAAGTATTTTGGGTGCCAGATTCTCTTATGAAAAAATGATTATGCCCTT
TGTACTTTAATATGCATCAAGCTGCATCGAGCTTCAAATAACAAACTAAT
TGGTGGCTGCTTTGAGCCACATTATTTGATATGATGTGAAATGACATTGT
GCTGAAAGGAGAAAAAGACCTTCAATAATAAGGGTGTGGTTTGTC
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