DR403986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403986 vs. ExPASy Swiss-Prot
Match: CLH1_CITUN (Chlorophyllase-1, chloroplastic OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.291e-54 Identity = 121/229 (52.84%), Postives = 145/229 (63.32%), Query Frame = 1 Query: 40 MTALADSKPV-SVEAKPGLATALLSVFSSGPYSPKLKTVNKPWFNSFPP-KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFL-PPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSFEFSIPXXXXXXXXXXXXKCMQPCAPENKNH 717 M A+ DSKP SV+ P LATA L VF+ G YS K T+ +S PP KPL IV P EKGT+ VILF HGT+LSN SYS + DH+ASHG+IVVAPQLY + PP E+N AA V WL GLQ LPEN EAN++ VA+MGHSRGG AF L+L Y A++G+DPVAG S + L+P ILS DSF+FSIP +C+ CAPE NH Sbjct: 1 MAAMVDSKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAEKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAG-TSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANH 220
BLAST of DR403986 vs. ExPASy Swiss-Prot
Match: CLH1_CITSI (Chlorophyllase-1, chloroplastic OS=Citrus sinensis GN=CHLASE1 PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.864e-53 Identity = 119/229 (51.97%), Postives = 144/229 (62.88%), Query Frame = 1 Query: 40 MTALADSKPV-SVEAKPGLATALLSVFSSGPYSPKLKTVNKPWFNSFPP-KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFL-PPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSFEFSIPXXXXXXXXXXXXKCMQPCAPENKNH 717 M A+ D+KP SV+ P LATA L VF+ G YS K T+ +S PP KPL IV P KGT+ VILF HGT+LSN SYS + DH+ASHG+IVVAPQLY + PP E+N AA V WL GLQ LPEN EAN++ VA+MGHSRGG AF L+L Y A++G+DPVAG S + L+P ILS DSF+FSIP +C+ CAPE NH Sbjct: 1 MAAMVDAKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAG-TSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANH 220
BLAST of DR403986 vs. ExPASy Swiss-Prot
Match: CLH1_ARATH (Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.637e-41 Identity = 91/183 (49.73%), Postives = 116/183 (63.39%), Query Frame = 1 Query: 178 PPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIP-XXXXXXXXXXXXKCMQPCAPENKNH 717 PPKP+ I P GTY V+LFFHG L N YS++L+H+ASHGYI+VAPQL LPP G EV+DA +V+NW S L++ LP +V AN Y +L+GHSRGG AF +ALG+A SI SAL+GIDPVAG + + +P IL++ +SFE IP M PCAP + NH Sbjct: 41 PPKPVRITCPTVAGTYPVVLFFHGFYLRNYFYSDVLNHIASHGYILVAPQLCKLLPPGGQVEVDDAGSVINWASENLKAHLPTSVNANGKYTSLVGHSRGGKTAFAVALGHAATLDPSITFSALIGIDPVAG-TNKYIRTDPHILTYKPESFELDIPVAVVGTGLGPKWNNVMPPCAPTDLNH 222
BLAST of DR403986 vs. ExPASy Swiss-Prot
Match: CLH0_CHEAL (Chlorophyllase type 0 OS=Chenopodium album GN=CACLH PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31 Identity = 79/188 (42.02%), Postives = 110/188 (58.51%), Query Frame = 1 Query: 103 LLSVFSSGPYSPKLKTVNKPWFNSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPK---GNGEVNDAANVLNWLSTGLQSELPE---NVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIP 642 + VF G + + + P+PL I+ P+E G Y V+LF HGT LSN YS +++ASHG+IVVAP+L+ PPK E++ AA+V NW+ LQ L VE +L +A+ GHSRGG AF LALG+ +N + + SAL+G+DPVAG SV P +L++ +SF SIP Sbjct: 34 ITDVFHKGNFQVTNNPIRVKRYEFSAPEPLIIISPKEAGVYPVLLFIHGTMLSNEDYSLFFNYIASHGFIVVAPKLFRLFPPKLPSQQDEIDMAASVANWMPLYLQVVLQRYVTGVEGDLEKLAISGHSRGGKSAFALALGF-SNIKLDVTFSALIGVDPVAG-RSVDDRTLPHVLTYKPNSFNLSIP 219
BLAST of DR403986 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 76/188 (40.43%), Postives = 103/188 (54.79%), Query Frame = 1 Query: 178 PPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLAL---GYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFS---IPXXXXXXXXXXXXKCMQPCAPENKNH 717 PPK L + P E+G Y V++ HG L N+ YS L+ H++SHG+I++APQLY P E+ A +++WLS GL LP V NL+ AL GHSRGG AF +AL GY++N +KIS L+GIDPV G + PP+L++ +SF+ I PCAP NH Sbjct: 41 PPKQLLVATPVEEGDYPVVMLLHGYLLYNSFYSQLMLHVSSHGFILIAPQLYSIAGPDTMDEIKSTAEIMDWLSVGLNHFLPAQVTPNLSKFALSGHSRGGKTAFAVALKKFGYSSN----LKISTLIGIDPVDGTGK-GKQTPPPVLAYLPNSFDLDKTPILVIGSGLGETARNPLFPPCAPPGVNH 223 The following BLAST results are available for this feature:
BLAST of DR403986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403986 ID=DR403986; Name=DR403986; organism=Citrus sinensis; type=EST; length=717bpback to top |