CX069692

Overview
NameCX069692
Unique NameCX069692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069692 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 9.789e-70
Identity = 119/138 (86.23%), Postives = 131/138 (94.93%), Query Frame = -3
Query:  262 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLA 675
            FVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHGVSGFHIDPYHPDQ +EL+++FF++C  DP+HWNK+SDGGL+RIYERYTWKIYSERL+TLAGVY FWKYVSKL+RRETRRYLEMFYILKFRDLA SV +A
Sbjct:  670 FVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIEHGVSGFHIDPYHPDQASELLVDFFQRCKEDPNHWNKVSDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIA 807          
BLAST of CX069692 vs. ExPASy Swiss-Prot
Match: SUS1_TULGE (Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.666e-67
Identity = 115/140 (82.14%), Postives = 128/140 (91.43%), Query Frame = -3
Query:  256 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 675
            FVQPAFYEAFGLTVVE+MTCGLPTFATCHGGPAEII HGVSGFHIDPYH D+ +E ++ FFEKC  DP+HW KIS GGL+RIYE+YTWK+YSERL+TLAGVYGFWKYVS LDRRETRRYLEMFY LK+R+LAKSV LA+D
Sbjct:  665 FVQPAFYEAFGLTVVESMTCGLPTFATCHGGPAEIIVHGVSGFHIDPYHGDKASEQLVSFFEKCKEDPAHWEKISQGGLQRIYEKYTWKLYSERLMTLAGVYGFWKYVSNLDRRETRRYLEMFYALKYRNLAKSVPLAID 804          
BLAST of CX069692 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 1.323e-66
Identity = 117/141 (82.98%), Postives = 127/141 (90.07%), Query Frame = -3
Query:  253 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVDE 675
            FVQPAFYEAFGLTVVE+MTC LPTFATCHGGPAEIIE+GVSGFHIDPYHPDQVA  ++ FFE C  +P+HW KIS+GGLKRIYERYTWK YSERLLTLAGVY FWK+VSKL+RRETRRYLEMFY LKFRDLA S+ LA DE
Sbjct:  664 FVQPAFYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETCNTNPNHWVKISEGGLKRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATDE 804          
BLAST of CX069692 vs. ExPASy Swiss-Prot
Match: SUS2_TULGE (Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.257e-66
Identity = 116/140 (82.86%), Postives = 129/140 (92.14%), Query Frame = -3
Query:  256 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 675
            FVQPAFYEAFGLTVVE+MTCGLPTFATCHGGPAEII HGVSG+HIDPYH D+ AEL+++FFEK   D +HW+ IS+GGLKRIYE+YTWKIYSERLLTLAGVYGFWKYVS LDRRET+RYLEMFY LK+R+LAKSV LAVD
Sbjct:  667 FVQPAFYEAFGLTVVESMTCGLPTFATCHGGPAEIIVHGVSGYHIDPYHGDKAAELLVDFFEKSKKDQTHWDAISNGGLKRIYEKYTWKIYSERLLTLAGVYGFWKYVSNLDRRETKRYLEMFYALKYRNLAKSVPLAVD 806          
BLAST of CX069692 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.910e-65
Identity = 122/152 (80.26%), Postives = 129/152 (84.87%), Query Frame = -3
Query:  220 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVDEQN*ASSAKAAF 675
            F QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIE GVSGFHIDPYH DQ AE M EFF KC  DP++W KIS GGL RI ERYTW+ YSERL+TLAGVYGFWKYVSKL+RRETRRYLEMFYILKFRDLA SV LA DE+   + A A F
Sbjct:  613 FAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEDGVSGFHIDPYHADQ-AEKMTEFFVKCREDPNYWTKISAGGLLRIKERYTWQKYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLATDEEPSTTDAVATF 763          
BLAST of CX069692 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.050e-63
Identity = 115/141 (81.56%), Postives = 124/141 (87.94%), Query Frame = -3
Query:  253 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVDE 675
            FVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEII HG SGFHIDPYH +QVAEL++ FFEKC  DPS W+ IS GGLKRI E+YTW+IYSERLLTLAGVYGFWK+VSKLDR E RRYLEMFY LK+R LA+SV LA DE
Sbjct:  668 FVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIVHGKSGFHIDPYHGEQVAELLVNFFEKCKTDPSQWDAISAGGLKRIQEKYTWQIYSERLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAKDE 808          
BLAST of CX069692 vs. ExPASy Swiss-Prot
Match: SUS1_HORVU (Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.159e-62
Identity = 109/143 (76.22%), Postives = 125/143 (87.41%), Query Frame = -3
Query:  247 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVDEQN 675
            FVQPAFYEAFGLTV+EAMTCGLPT ATCHGGPAEII  GVSG HIDPYH D+ A++++ FFEK   DPS+W+KIS GGLKRIYE+YTWK+YSERL+TL GVYGFWKYVS L+RRETRRYLEMFY LK+R LA +V LAVD ++
Sbjct:  662 FVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKSTADPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGES 804          
BLAST of CX069692 vs. ExPASy Swiss-Prot
Match: SUS2_ORYSJ (Sucrose synthase 2 OS=Oryza sativa subsp. japonica GN=SUS2 PE=1 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.281e-61
Identity = 105/143 (73.43%), Postives = 124/143 (86.71%), Query Frame = -3
Query:  247 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVDEQN 675
            FVQPAFYEAFGLTV+EAMTCGLPT ATCHGGPAEII  GVSG HIDPYH D+ A++++ FFEKC  D ++W+ IS GGL+RIYE+YTWK+YSERL+TL GVYGFWKYVS L+RRETRRY+EMFY LK+R LA +V LAVD ++
Sbjct:  663 FVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKCKQDSTYWDNISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASAVPLAVDGES 805          
BLAST of CX069692 vs. ExPASy Swiss-Prot
Match: SUS2_DAUCA (Sucrose synthase isoform 2 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.870e-61
Identity = 109/140 (77.86%), Postives = 122/140 (87.14%), Query Frame = -3
Query:  256 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 675
            FVQPAFYEAFGLTV+EAMTCGLPTFAT HGGPAEII HG SGFHIDPYH ++ AEL++ FFE+C  +PSHW  IS GGLKRI E+YTW+IYSERLLTL GVYGFWK+VSKLDR E RRYLEMF  LK+R+LA+SV LAVD
Sbjct:  662 FVQPAFYEAFGLTVIEAMTCGLPTFATIHGGPAEIIVHGTSGFHIDPYHGEKAAELIVNFFERCKTEPSHWETISAGGLKRIQEKYTWQIYSERLLTLGGVYGFWKHVSKLDRIEIRRYLEMFCALKYRNLAESVPLAVD 801          
BLAST of CX069692 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.360e-61
Identity = 109/140 (77.86%), Postives = 124/140 (88.57%), Query Frame = -3
Query:  256 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 675
            FVQPA YEAFGLTVVEAMTCGLPTFATC+GGPAEII HG SGFHIDPYH D+ A+L++EFFEK   DPSHW+KIS  GL+RI E+YTW+IYS+RLLTL GVYGFWK+VS LDRRE+RRYLEMFY LK+R LA+SV LAV+
Sbjct:  666 FVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPSHWDKISQAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805          
The following BLAST results are available for this feature:
BLAST of CX069692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
SUS2_PEA9.789e-7086.23Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUS1_TULGE2.666e-6782.14Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS2_ARATH1.323e-6682.98Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]
SUS2_TULGE2.257e-6682.86Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1[more]
SUSY_BETVU1.910e-6580.26Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]
SUS1_DAUCA3.050e-6381.56Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]
SUS1_HORVU1.159e-6276.22Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 ... [more]
SUS2_ORYSJ1.281e-6173.43Sucrose synthase 2 OS=Oryza sativa subsp. japonica... [more]
SUS2_DAUCA4.870e-6177.86Sucrose synthase isoform 2 OS=Daucus carota PE=2 S... [more]
SUSY_PHAAU6.360e-6177.86Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C02-F4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069692 ID=CX069692; Name=CX069692; organism=Citrus sinensis; type=EST; length=677bp
TTTTTTTTTTTTTTTTTATCAATACCAGAGTTTGTGATTTTATAATTTTT
CCGTTATAATAATTCACGCTGAATGTTAGAACAGCAACGCCCGTCTAAGC
TGCTGCTTTTAGCTTGATACTCGTCGACAGGGAGTTTACACATTATTTAA
TACATAATGAAAAACAGTTCAAAACAACAGAAACAACTTCATATATAAGC
ATATAAAGAGTAACAAGTAGAAAGCTGCTTTAGCAGACGAAGCTCAGTTC
TGCTCATCAACAGCTAGCCGGACGGACTTTGCCAGATCACGGAACTTGAG
AATGTAAAACATCTCAAGATAACGACGAGTCTCTCTTCTGTCAAGCTTAG
ACACATATTTCCAGAAGCCATAAACCCCAGCTAATGTTAGGAGCCTCTCC
GAATATATCTTCCATGTGTACCTTTCATAAATTCGTTTCAGCCCTCCATC
AGAAATCTTGTTCCAGTGACTCGGATCGTTGTAGCATTTTTCAAAGAATT
CAATCATAAGTTCAGCCACCTGATCAGGGTGATAGGGATCAATATGGAAT
CCTGAAACACCATGCTCAATGATCTCTGCAGGGCCACCATGACAAGTGGC
AAATGTAGGAAGCCCGCAAGTCATGGCTTCTACAACTGTGAGGCCAAAAG
CTTCATAGAAAGCAGGCTGCACAAAAA
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