CX069661

Overview
NameCX069661
Unique NameCX069661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1505 contig Csv1_Contig1505:206..1068. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_MAGSM (Bifunctional protein folD OS=Magnetococcus sp. (strain MC-1) GN=folD PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 7.072e-59
Identity = 125/236 (52.97%), Postives = 153/236 (64.83%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K++AC   GI SF  +L    S+AEL++ + +LN    VHGILVQLPLPKHI+E+KVL  IS  KD DGFHP N+G+L     DP F PCTP G +E+LK SGV  KGK AVV+GRSNIVG PV+L+LL A ATVTI HS TPD    V+ ADIV+AA G+A M+ GSWIK GA VIDVG N  +D       +L GDVD+    +                  MLL+NT++GAKR
Sbjct:   53 KKRACETAGIASFSHELAATTSQAELLALIEQLNQDDAVHGILVQLPLPKHIDEQKVLEAISPSKDADGFHPYNVGRLVTG--DPTFQPCTPWGVMEMLKVSGVDPKGKHAVVIGRSNIVGKPVALMLLAAHATVTICHSRTPDLAETVKRADIVVAAVGRANMVPGSWIKKGAVVIDVGINRGEDG------KLCGDVDYASCFEHASAITPVPGGVGPMTIAMLLKNTVEGAKR 280          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: C1TC_YEAST (C-1-tetrahydrofolate synthase, cytoplasmic OS=Saccharomyces cerevisiae GN=ADE3 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.334e-57
Identity = 121/248 (48.79%), Postives = 156/248 (62.90%), Query Frame = -3
Query:  157 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKP--------GAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRVIE 876
            MKRKA  E GI +  I L E  +E E++  V +LN  P  HGI+VQLPLP H++E+++   +  EKDVDGF P NIG+L  K   P FLPCTPKG +ELL ++ VTI+G R+VV+GRS+IVG PV+ LL   ++TVTI HS T D  S + +ADIV+ A GQ   +KG W KP           VIDVGTN V D +KKSG++ VGDV+F+EA K                  ML++NTL  AKR +E
Sbjct:   54 MKRKAAEEAGIVANFIHLDESATEFEVLRYVDQLNEDPHTHGIIVQLPLPAHLDEDRITSRVLAEKDVDGFGPTNIGELNKKNGHPFFLPCTPKGIIELLHKANVTIEGSRSVVIGRSDIVGSPVAELLKSLNSTVTITHSKTRDIASYLHDADIVVVAIGQPEFVKGEWFKPRDGTSSDKKTVVIDVGTNYVADPSKKSGFKCVGDVEFNEAIKYVHLITPVPGGVGPMTVAMLMQNTLIAAKRQME 301          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_GEOUR (Bifunctional protein folD OS=Geobacter uraniireducens (strain Rf4) GN=folD PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.971e-57
Identity = 123/237 (51.90%), Postives = 153/237 (64.56%), Query Frame = -3
Query:  166 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 876
            MK KAC +VGI S +  LP   SEA+L+  +H+LN+ P +HGIL+QLPLPK I+ EKVL  IS EKD DGFHP N+G+L +    PLF PCTP G + +LK +GV + GK  VVVGRSNIVG PV+ + L+ +ATVT+ HS T D  + V  AD+VIAA GQ  MIKG+WIK GA VIDVG N V +       +LVGDV+F  A +                  MLL NTL+ AKR
Sbjct:   51 MKEKACKDVGIFSDEYKLPVDTSEADLLLLIHKLNSDPKIHGILIQLPLPKQIDTEKVLEAISPEKDADGFHPYNVGRLVIG--KPLFQPCTPYGVMVMLKEAGVELAGKEVVVVGRSNIVGKPVAFMCLQQNATVTLCHSKTRDLAAKVGMADVVIAAVGQPEMIKGAWIKEGAVVIDVGVNRVGEK------KLVGDVEFDAAAERASAITPVPGGVGPMTITMLLYNTLEAAKR 279          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_TREDE (Bifunctional protein folD OS=Treponema denticola GN=folD PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.475e-56
Identity = 121/238 (50.84%), Postives = 155/238 (65.13%), Query Frame = -3
Query:  166 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 873
            K  A  EVG+      LPE  ++ EL+  + ELNA   ++GILVQLPLPK I+ + V+  I+ EKDVDGFHP+N+GKL + G D  F+PCTP G + LLKR+GV  KG + V+VGRSNIVG P+S+L++  D  ATVT+ HS T +   + +EADI++AA G+   IK   IK GA VIDVG N +DDSTKKSG+RLVGDVDF  AC+                  ML+ NTL  AKR
Sbjct:   53 KTNALHEVGMNDRTFRLPETTTQDELLKLIKELNADKLINGILVQLPLPKQIDPDAVIEAINPEKDVDGFHPVNVGKLLL-GHDT-FIPCTPHGVIHLLKRTGVETKGAKVVIVGRSNIVGKPLSVLMMNKDVNATVTVCHSGTKNLTEVTKEADILVAAMGKPRFIKADMIKKGAVVIDVGVNRIDDSTKKSGFRLVGDVDFEPACEIASAITPVPKGVGPMTIAMLVANTLIAAKR 288          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_LARHH (Bifunctional protein folD OS=Laribacter hongkongensis (strain HLHK9) GN=folD PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.475e-56
Identity = 117/234 (50.00%), Postives = 152/234 (64.96%), Query Frame = -3
Query:  172 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGA 873
            K+K C + GI+S   DLPE  SEA+L++ V ELNA  DV GILVQLPLP+HIN E V+  I+ +KDVDGFHP N+G+LA+K   PL  PCTP+G + +L+ +G++++GK AVV+G+SNIVG P++L LL   ATVTI HS T D    V+ ADI++AA G    +KG W+KPGA VIDVG N ++D       +L GDVDF  A +                   LL NTLD A
Sbjct:   54 KKKGCEKAGIQSLAYDLPESTSEADLLALVDELNARSDVDGILVQLPLPRHINPETVIERINPKKDVDGFHPYNMGRLAVKM--PLLRPCTPRGVMIMLEHAGISVEGKHAVVIGQSNIVGRPMALELLMERATVTICHSRTRDLPEEVKRADIIVAAVGIPRFVKGDWVKPGAVVIDVGINRLEDG------KLCGDVDFDAAKEHASWITPVPGGVGLMTVATLLANTLDAA 279          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_LISMO (Bifunctional protein folD OS=Listeria monocytogenes GN=folD PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.515e-56
Identity = 120/237 (50.63%), Postives = 157/237 (66.24%), Query Frame = -3
Query:  163 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRV 873
            K+K   E G+KS  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA VIDVG +  +++      +L GDVDF +  +                  MLL NTL  AKR+
Sbjct:   52 KQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISFDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDENN------KLCGDVDFDDVVQEAGFITPVPGGVGPMTITMLLANTLKAAKRI 280          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_LISMC (Bifunctional protein folD OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=folD PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.515e-56
Identity = 120/237 (50.63%), Postives = 157/237 (66.24%), Query Frame = -3
Query:  163 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRV 873
            K+K   E G+KS  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA VIDVG +  +++      +L GDVDF +  +                  MLL NTL  AKR+
Sbjct:   52 KQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAVVIDVGMDRDENN------KLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRI 280          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_LISMH (Bifunctional protein folD OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=folD PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.285e-56
Identity = 120/237 (50.63%), Postives = 157/237 (66.24%), Query Frame = -3
Query:  163 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRV 873
            K+K   E G+KS  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA VIDVG +  +++      +L GDVDF +  +                  MLL NTL  AKR+
Sbjct:   52 KQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDENN------KLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRI 280          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_LISW6 (Bifunctional protein folD OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=folD PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.604e-56
Identity = 120/237 (50.63%), Postives = 156/237 (65.82%), Query Frame = -3
Query:  163 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRV 873
            K+K   E G+KS  I+LPE VSE +L+  V ELN    +HGILVQLPLPKHI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T +   + +EADI++ A G A  +K  +IKPGA VIDVG +  +++      +L GDVDF +  +                  MLL NTL  AKR+
Sbjct:   52 KQKRTEEAGMKSVLIELPETVSEEKLLEVVEELNTDDTIHGILVQLPLPKHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKNLPEVAKEADILVVATGLAKFVKKEYIKPGAIVIDVGMDRDENN------KLCGDVDFDDVIEEAGFITPVPGGVGPMTITMLLANTLKAAKRI 280          
BLAST of CX069661 vs. ExPASy Swiss-Prot
Match: FOLD_LISMF (Bifunctional protein folD OS=Listeria monocytogenes serotype 4b (strain F2365) GN=folD PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.604e-56
Identity = 120/237 (50.63%), Postives = 157/237 (66.24%), Query Frame = -3
Query:  163 KRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRV 873
            K+K   E G+KS  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA VIDVG +  +++      +L GDVDF +  +                  MLL NTL  AKR+
Sbjct:   52 KQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLIENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAVVIDVGMDRDENN------KLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRI 280          
The following BLAST results are available for this feature:
BLAST of CX069661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_MAGSM7.072e-5952.97Bifunctional protein folD OS=Magnetococcus sp. (st... [more]
C1TC_YEAST1.334e-5748.79C-1-tetrahydrofolate synthase, cytoplasmic OS=Sacc... [more]
FOLD_GEOUR2.971e-5751.90Bifunctional protein folD OS=Geobacter uraniireduc... [more]
FOLD_TREDE1.475e-5650.84Bifunctional protein folD OS=Treponema denticola G... [more]
FOLD_LARHH1.475e-5650.00Bifunctional protein folD OS=Laribacter hongkongen... [more]
FOLD_LISMO2.515e-5650.63Bifunctional protein folD OS=Listeria monocytogene... [more]
FOLD_LISMC2.515e-5650.63Bifunctional protein folD OS=Listeria monocytogene... [more]
FOLD_LISMH3.285e-5650.63Bifunctional protein folD OS=Listeria monocytogene... [more]
FOLD_LISW65.604e-5650.63Bifunctional protein folD OS=Listeria welshimeri s... [more]
FOLD_LISMF5.604e-5650.63Bifunctional protein folD OS=Listeria monocytogene... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12A06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A06-B12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069661 ID=CX069661; Name=CX069661; organism=Citrus sinensis; type=EST; length=878bp
CCCCCCCTTTTTTTTTAACTCATGAACCATCTTCACATGTATTATAAATT
ATTAACCATGATAAATAAAAATGTTTTCAAACAAAACCAAAGGAGAATGA
GTACCGTCTCATGAATTACAATGAAGTCAAGAACAAAGACGAGGGCAGTT
TTACAGCTCGATCACACGCTTTGCACCATCCAAGGTATTCCTGAGTAGCA
TAGCAACAGTCATTGGGCCCACACCACCTGGAACAGGAGTTACACATCCA
GCTACTTTACACGCTTCATGGAAATCCACATCTCCCACTAACCTATAGCC
TGACTTCTTGGTCGAGTCATCGACAGCATTTGTTCCAACATCAATAACAG
CAGCACCAGGCTTGATCCAACTTCCCTTGATCATCATTGCTTGTCCGGCT
GCAGCAATAACAATGTCAGCTTCACGAACGATACTTTCAGGATCAGGGGT
ATGTGAATGGACTATGGTTACAGTGGCATCAGCTTTCAGCAGCAGCAATG
AAACTGGGAGTCCAACAATGTTACTTCGACCCACCACAACAGCCCTTTTA
CCCTTTATAGTAACACCACTTCGTTTCAGAAGTTCAAGGCATCCCTTGGG
CGTGCAAGGAAGGAAGAGGGGGTCTCTGCCTTTCATTGCGAGCTTGCCAA
TGTTCAAAGGATGAAAGCCATCAACATCCTTCTCAAGGCTTATCTCACCT
AAAACTTTCTCTTCATTTATATGCTTCGGCAATGGAAGTTGAACCAATAT
ACCATGTACATCAGGCATTGCGTTAAGCTCGTGAACCTTGCTGATAAGCT
CGGCCTCGGAGACTTGCTCGGGGAGGTCTATGTCAAAAGACTTAATCCCA
ACTTCAGCACAAGCCTTTCTCTTCATGC
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