CX069472

Overview
NameCX069472
Unique NameCX069472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069472 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.339e-31
Identity = 89/231 (38.53%), Postives = 124/231 (53.68%), Query Frame = 2
Query:  164 LPKVVLTSAGGSEAELYLFGGCVTSWKASNDKDLLFVRPDAVFNKKKPISGGVPHCFPQFGP-GPMQQHGFARNMDWSI-LDSENVEGNPVI----TLELKDGPYSRAMWDFSFRALFKVILNTK---SISTELTITNTDNKPFSFSSALHTYFRASVTGASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDAPS-VVHLDNGLGDTITIRKYNWSDAVL 826
            L KVVL  A    AE+YL+GG VTSWK  N ++LLF+   A+F   K I GG+P C PQFG  G ++QHGFARN  WSI  D   +  NP I     L L+       +W  SF    +V L      S+++ +  TNTD +PFS++ A HTYF   V+  S   ++G +T++   + K      E+ D + F   VD +YL APS +  +D+    T  + K    DAV+
Sbjct:   33 LEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGIPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAIKAFVDLILRPAEEDLKIWPHSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYF--FVSDISEVRVEGLETMDYLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVV 261          
BLAST of CX069472 vs. ExPASy Swiss-Prot
Match: YEAD_ECOLI (Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli (strain K12) GN=yeaD PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.275e-14
Identity = 60/188 (31.91%), Postives = 89/188 (47.34%), Query Frame = 2
Query:  200 EAELYLFGGCVTSWKASNDKDLLFVRPDAVFNKKKPISGGVPHCFPQFGPGPMQ---QHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMW--DFSFRALFKVILNTKSISTELTITNTDNKPFSFSSALHTYFR-ASVTGASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLD 745
            +A   L G  + SWK + ++++L++  +  F     I GGVP C+P FGP   Q    HGFARN+ W++           +T EL     ++  W  DF+  A F+V    K+   +L      +  F  +SALHTYF    +   SV GL G + ++K  D K   E        TFP   D +YL+
Sbjct:   37 KASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDADGVALTFELTQSEETKKFWPHDFTLLAHFRV---GKTCEIDL----ESHGEFETTSALHTYFNVGDIAKVSVSGL-GDRFIDKVNDAK---ENVLTDGIQTFPDRTDRVYLN 213          
BLAST of CX069472 vs. ExPASy Swiss-Prot
Match: YMY9_YEAST (Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae GN=YMR099C PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.840e-14
Identity = 67/240 (27.92%), Postives = 105/240 (43.75%), Query Frame = 2
Query:  170 KVVLTSAGGSEAELYL--FGGCVTSWKASNDKDLLFVRPDAVFNKKKPISGGVPHCFPQFGP-------GPMQQHGFARNMDWSILDSENVEGNPVITLELKD---GPYSRAMWDFSFRALFKVILNTKSISTELTITNT-DNKPFSFSSALHTYFR-ASVTGASVKGLKGCK----TLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDAP---SVVHLDNGLGDTITIRKYNWSDAVL 826
            +VVLT        +++  +G  V SWK  +++ L ++   A  +  KP+ GG+P  FP FG          + QHG ARN  W  L  +  E  P +   LK     P    +W   +  +  V L +  + T + + NT  +K   F+   HTYFR   + G  V  L G K     L +    K+P+        VTF    D IY +     ++  +D G+    T+++YN  D V+
Sbjct:    9 EVVLTHPADETTSVHILKYGATVYSWKLKSEEQL-WLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHGLARNSTWEFL-GQTKENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQLLKESYVDKHPV--------VTFNQETDVIYQNVSAERAIQIVDKGV-QIHTLKRYNLPDTVV 237          
The following BLAST results are available for this feature:
BLAST of CX069472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AAPC_CENCI3.339e-3138.53Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
YEAD_ECOLI1.275e-1431.91Putative glucose-6-phosphate 1-epimerase OS=Escher... [more]
YMY9_YEAST2.840e-1427.92Glucose-6-phosphate 1-epimerase OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_10F08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10F08-K16-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069472 ID=CX069472; Name=CX069472; organism=Citrus sinensis; type=EST; length=827bp
ATCAATCGAATTTTTAATGGCAACGGCTTCAATGCCCTTTTCGCTCCCCA
GCCTAAACTACCGGGCTGTACGAGTAGGACGAGTCAATCGAAAACAAGGT
GTGGCCTTTGCAACAATGAATAAAGAAACTTTAGGAGTGCGAGTGACAGA
AGGTGAAGGCAGTTTGCCCAAGGTTGTGCTTACTTCTGCTGGCGGTAGTG
AAGCTGAGCTATATCTGTTTGGAGGATGTGTTACATCGTGGAAAGCTTCT
AATGACAAAGATCTCCTTTTTGTTAGACCTGATGCTGTTTTTAACAAGAA
AAAACCTATCAGTGGAGGAGTTCCACATTGCTTCCCACAGTTTGGACCTG
GCCCAATGCAGCAGCATGGATTTGCAAGGAATATGGATTGGTCCATTCTT
GACTCAGAAAATGTGGAAGGAAATCCTGTTATAACTCTGGAGCTAAAGGA
TGGTCCTTACAGTCGTGCCATGTGGGATTTCAGTTTTCGAGCTTTATTCA
AGGTCATTCTAAATACCAAGAGTATTTCTACAGAGTTGACCATCACAAAC
ACAGACAACAAGCCATTTTCGTTTAGTTCTGCTTTGCACACATACTTCAG
GGCTTCTGTCACAGGAGCATCTGTGAAAGGTTTGAAAGGTTGCAAAACTT
TAAATAAAGACCCAGATCCTAAAAATCCAATGGAGGGAAAGGAGGAAAGG
GATAGGGTCACTTTTCCTGGATTTGTAGATTGCATTTACCTTGATGCCCC
GAGTGTGGTACACCTTGACAATGGCTTGGGTGATACAATAACTATCCGCA
AATACAATTGGTCAGATGCTGTTTTAT
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