CX069471

Overview
NameCX069471
Unique NameCX069471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069471 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.656e-24
Identity = 79/230 (34.35%), Postives = 117/230 (50.87%), Query Frame = -1
Query:  243 GGVPHCFPQFGP-GPMQQHGFARNMDWSI-LDSENVEGNPVIT----LELKDGPYSRAMWDFSFRALFKVILNTK---SISTELTITNTDNKPFSFSSALHTYFRASVTGASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDAPS-VVHLDNGLGDTITIRNTNWSDAVLWNPHLQM--------EACYKDFVCVENAKIGK-VQLEPEQSWTAKQHLS 875
            GG+P C PQFG  G ++QHGFARN  WSI  D   +  NP I     L L+       +W  SF    +V L      S+++ +  TNTD +PFS++ A HTYF   V+  S   ++G +T++   + K      E+ D + F   VD +YL APS +  +D+    T  +      DAV+WNP  +         +A YK+ +CVE A + K + L+P + W  +  LS
Sbjct:   83 GGIPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAIKAFVDLILRPAEEDLKIWPHSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYF--FVSDISEVRVEGLETMDYLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVVWNPWDKKAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRGRIALS 310          
BLAST of CX069471 vs. ExPASy Swiss-Prot
Match: YEAD_ECOLI (Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli (strain K12) GN=yeaD PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.186e-15
Identity = 73/233 (31.33%), Postives = 105/233 (45.06%), Query Frame = -1
Query:  225 GGVPHCFPQFGPGPMQ---QHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMW--DFSFRALFKVILNTKSISTELTITNTDNKPFSFSSALHTYFR-ASVTGASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDAP--SVVHLDNGLGDTITIRNTNWSDAVLWNPHLQMEAC--------YKDFVCVENAKIGKVQLEPEQSWTAKQHLSIN*RIA 875
            GGVP C+P FGP   Q    HGFARN+ W++           +T EL     ++  W  DF+  A F+V    K+   +L      +  F  +SALHTYF    +   SV GL G + ++K  D K   E        TFP   D +YL+    SV++ D  L   I + + +  + V WNP   +           YK FVCVE A   + Q   ++      HL+ + R+A
Sbjct:   75 GGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDADGVALTFELTQSEETKKFWPHDFTLLAHFRV---GKTCEIDL----ESHGEFETTSALHTYFNVGDIAKVSVSGL-GDRFIDKVNDAK---ENVLTDGIQTFPDRTDRVYLNPQDCSVIN-DEALNRIIAVGHQHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQKVTKEK---PAHLAQSIRVA 292          
BLAST of CX069471 vs. ExPASy Swiss-Prot
Match: YMY9_YEAST (Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae GN=YMR099C PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.633e-13
Identity = 65/239 (27.20%), Postives = 99/239 (41.42%), Query Frame = -1
Query:  246 GGVPHCFPQFGP-------GPMQQHGFARNMDWSILDSENVEGNPVITLELKD---GPYSRAMWDFSFRALFKVILNTKSISTELTITNT-DNKPFSFSSALHTYFR-ASVTGASVKGLKGCK----TLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDAP---SVVHLDNGLGDTITIRNTNWSDAVLWNPHLQM---------EACYKDFVCVENAKIGK-VQLEPEQSWTAKQHL 875
            GG+P  FP FG          + QHG ARN  W  L  +  E  P +   LK     P    +W   +  +  V L +  + T + + NT  +K   F+   HTYFR   + G  V  L G K     L +    K+P+        VTF    D IY +     ++  +D G+    T++  N  D V+WNP ++          +  Y+  +C+E   +   + L P + W A Q L
Sbjct:   58 GGIPLVFPVFGKNSTDEHLSKLPQHGLARNSTWEFL-GQTKENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQLLKESYVDKHPV--------VTFNQETDVIYQNVSAERAIQIVDKGV-QIHTLKRYNLPDTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNAYQLL 286          
The following BLAST results are available for this feature:
BLAST of CX069471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AAPC_CENCI5.656e-2434.35Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
YEAD_ECOLI8.186e-1531.33Putative glucose-6-phosphate 1-epimerase OS=Escher... [more]
YMY9_YEAST2.633e-1327.20Glucose-6-phosphate 1-epimerase OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_10F08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10F08-K16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069471 ID=CX069471; Name=CX069471; organism=Citrus sinensis; type=EST; length=878bp
CTTTTTTTTGAGTAAAACTTTGTTATCTATTCAAAATAGGAACACTTTTC
TTACGGAATCCATTTTCATATGGATACATTATGCCGACGTTAAAGATACA
ATAACTTGGAATCATTTTATTAACTGAGCTTTTAATGATTCAAGTGCTTG
TTAAATTTTTTGGAAACTGAAAAAATGAAAAGAAAAATAAAGGTGGATTC
CTTCTACAAATTCAGAAAGCACACGGCTATTCTTTAGTTGATGCTGAGAT
GCTGCTTAGCCGTCCAAGATTGTTCTGGCTCTAGCTGGACTTTTCCAATC
TTAGCATTTTCAACGCAAACAAAATCTTTGTAGCATGCTTCCATCTGCAG
ATGTGGGTTCCATAAAACAGCATCTGACCAATTTGTATTGCGGATAGTTA
TTGTATCACCCAAGCCATTGTCAAGGTGTACCACACTCGGGGCATCAAGG
TAAATGCAATCTACAAATCCAGGAAAAGTGACCCTATCCCTTTCCTCCTT
TCCCTCCATTGGATTTTTAGGATCTGGGTCTTTATTTAAAGTTTTGCAAC
CTTTCAAACCTTTCACAGATGCTCCTGTGACAGAAGCCCTGAAGTATGTG
TGCAAAGCAGAACTAAACGAAAATGGCTTGTTGTCTGTGTTTGTGATGGT
CAACTCTGTAGAAATACTCTTGGTATTTAGAATGACCTTGAATAAAGCTC
GAAAACTGAAATCCCACATGGCACGACTGTAAGGACCATCCTTTAGCTCC
AGAGTTATAACAGGATTTCCTTCCACATTTTCTGAGTCAAGAATGGACCA
ATCCATATTCCTTGCAAATCCATGCTGCTGCATTGGGCCAGGTCCAAACT
GTGGGAAGCAATGTGGAACTCCTCCACT
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