CX054052

Overview
NameCX054052
Unique NameCX054052
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4272 contig Csv1_Contig4272:4..667. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX054052 vs. ExPASy Swiss-Prot
Match: GSOX4_ARATH (Flavin-containing monooxygenase FMO GS-OX4 OS=Arabidopsis thaliana GN=FMOGS-OX4 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.723e-51
Identity = 95/158 (60.13%), Postives = 122/158 (77.22%), Query Frame = 3
Query:   63 RELRREGHKVVVLEKSNRIGGTWVYTPRVESDQLGVDPNRAVIHTSLYSSLRTNLPREVMGFTDYPFTAR-DDGSGDPRRFPGHAEVLRYLEEFVSEFGIDEMVRFESEVVNVGLMENNKWKVKSKLRNGDGDCDEIYDAVVVCNGHYTEPRIAEIPG 533
            RELRREGH VVVL++  ++GG WVYTP  ESD+LG+DP R ++H+S+Y SLRTNLPRE MG+ D+PF  R DD S D RR+P H EVL YL++F +EF I+EM+RFE+EV+ V  + N KW+V+SK   G  + DEIYDAVV+C GH+ EP IA+IPG
Sbjct:   27 RELRREGHTVVVLDREKQVGGLWVYTPETESDELGLDPTRPIVHSSVYKSLRTNLPRECMGYKDFPFVPRGDDPSRDSRRYPSHREVLAYLQDFATEFNIEEMIRFETEVLRVEPV-NGKWRVQSKTGGGFSN-DEIYDAVVMCCGHFAEPNIAQIPG 182          
BLAST of CX054052 vs. ExPASy Swiss-Prot
Match: GSOX3_ARATH (Flavin-containing monooxygenase FMO GS-OX3 OS=Arabidopsis thaliana GN=FMOGS-OX3 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.658e-50
Identity = 95/158 (60.13%), Postives = 119/158 (75.32%), Query Frame = 3
Query:   63 RELRREGHKVVVLEKSNRIGGTWVYTPRVESDQLGVDPNRAVIHTSLYSSLRTNLPREVMGFTDYPFTAR-DDGSGDPRRFPGHAEVLRYLEEFVSEFGIDEMVRFESEVVNVGLMENNKWKVKSKLRNGDGDCDEIYDAVVVCNGHYTEPRIAEIPG 533
            RELRREGH VVV E+  ++GG WVYTP+ +SD L +DP R+ +H+S+Y SLRTN+PRE MG  D+PF  R DD S D RR+P H EVL Y+++F  EF I+EM+RFE+EVV V  ++N  W+V+SK   G  + DEIYDAVVVCNGHYTEP IA IPG
Sbjct:   27 RELRREGHSVVVFEREKQVGGLWVYTPKSDSDPLSLDPTRSKVHSSIYESLRTNVPRESMGVRDFPFLPRFDDESRDARRYPNHREVLAYIQDFAREFKIEEMIRFETEVVRVEPVDNGNWRVQSKNSGGFLE-DEIYDAVVVCNGHYTEPNIAHIPG 183          
BLAST of CX054052 vs. ExPASy Swiss-Prot
Match: GSOX2_ARATH (Flavin-containing monooxygenase FMO GS-OX2 OS=Arabidopsis thaliana GN=FMOGS-OX2 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.829e-50
Identity = 96/158 (60.76%), Postives = 118/158 (74.68%), Query Frame = 3
Query:   63 RELRREGHKVVVLEKSNRIGGTWVYTPRVESDQLGVDPNRAVIHTSLYSSLRTNLPREVMGFTDYPFTAR-DDGSGDPRRFPGHAEVLRYLEEFVSEFGIDEMVRFESEVVNVGLMENNKWKVKSKLRNGDGDCDEIYDAVVVCNGHYTEPRIAEIPG 533
            REL REGH VVVLE+   +GG W+Y+P+ ESD L +DP R+++H+S+Y SLRTNLPRE MGFTD+PF  R DD S D RR+P H EVL YL++F  EF ++EMVRFE EVV V  + N KW+V SK   G    DEI+DAVVVC+GHYTEP +A IPG
Sbjct:   27 RELSREGHTVVVLEREKEVGGLWIYSPKAESDPLSLDPTRSIVHSSVYESLRTNLPRECMGFTDFPFVPRFDDESRDSRRYPSHMEVLAYLQDFAREFNLEEMVRFEIEVVRVEPV-NGKWRVWSKTSGGVSH-DEIFDAVVVCSGHYTEPNVAHIPG 182          
BLAST of CX054052 vs. ExPASy Swiss-Prot
Match: GSOX5_ARATH (Flavin-containing monooxygenase FMO GS-OX5 OS=Arabidopsis thaliana GN=FMOGS-OX5 PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.825e-50
Identity = 100/179 (55.87%), Postives = 124/179 (69.27%), Query Frame = 3
Query:    6 IQSINXXXXXXXXXXXXXXRELRREGHKVVVLEKSNRIGGTWVYTPRVESDQLGVDPNRAVIHTSLYSSLRTNLPREVMGFTDYPFTAR--DDGSGDPRRFPGHAEVLRYLEEFVSEFGIDEMVRFESEVVNVGLMENNKWKVKSKLRNGDG-DCDEIYDAVVVCNGHYTEPRIAEIPG 533
            + S+N              RELRRE H VVV E+ +++GG WVYTP  E D L +DPNR ++H+S+Y SLRTNLPRE MG+ D+PF  R  DD S D RR+P H EVL YLE+F  EF + EMVRF++EVV V   E+ KW+V+SK  N DG   DEI+DAVVVCNGHYTEPR+A +PG
Sbjct:    8 VNSLNVAVIGAGAAGLVAARELRRENHTVVVFERDSKVGGLWVYTPNSEPDPLSLDPNRTIVHSSVYDSLRTNLPRECMGYRDFPFVPRPEDDESRDSRRYPSHREVLAYLEDFAREFKLVEMVRFKTEVVLVE-PEDKKWRVQSK--NSDGISKDEIFDAVVVCNGHYTEPRVAHVPG 183          
BLAST of CX054052 vs. ExPASy Swiss-Prot
Match: GSOX1_ARATH (Flavin-containing monooxygenase FMO GS-OX1 OS=Arabidopsis thaliana GN=FMOGS-OX1 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.098e-45
Identity = 91/158 (57.59%), Postives = 114/158 (72.15%), Query Frame = 3
Query:   63 RELRREGHKVVVLEKSNRIGGTWVYTPRVESDQLGVDPNRAVIHTSLYSSLRTNLPREVMGFTDYPFTAR-DDGSGDPRRFPGHAEVLRYLEEFVSEFGIDEMVRFESEVVNVGLMENNKWKVKSKLRNGDGDCDEIYDAVVVCNGHYTEPRIAEIPG 533
            RELRREGH VVV ++  ++GG W Y+ + +SD L +D  R ++HTS+Y SLRTNLPRE MGFTD+PF  R  D S D RR+P H EVL YL++F  EF I+EMVRFE+EVV V  + N KW V+SK   G     EI+DAVVVC+GH+TEP +A IPG
Sbjct:   27 RELRREGHTVVVFDREKQVGGLWNYSSKADSDPLSLDTTRTIVHTSIYESLRTNLPRECMGFTDFPFVPRIHDISRDSRRYPSHREVLAYLQDFAREFKIEEMVRFETEVVCVEPV-NGKWSVRSKNSVGFA-AHEIFDAVVVCSGHFTEPNVAHIPG 182          
BLAST of CX054052 vs. ExPASy Swiss-Prot
Match: FMO5_RAT (Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus GN=Fmo5 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11
Identity = 44/154 (28.57%), Postives = 76/154 (49.35%), Query Frame = 3
Query:   78 EGHKVVVLEKSNRIGGTWVYTPRVESDQLGVDPNRAVIHTSLYSSLRTNLPREVMGFTDYPFTARDDGSGDPRRFPG---HAEVLRYLEEFVSEFGIDEMVRFESEVVNV----GLMENNKWKVKSKLRNGDGDCDEIYDAVVVCNGHYTEPRI 518
            EG + V  E+S+ IGG W Y    E  +            S+Y S+  N  +E+M F+DYP          P  +P    +++VL Y   +  EFG+ + ++F++ V +V        + +W+V ++   G    D ++D V+VC GH+T+P +
Sbjct:   25 EGLEPVCFERSDDIGGLWRYQENPEKGR-----------ASIYKSVIINTSKEMMCFSDYPI---------PDHYPNFMHNSQVLEYFRMYAKEFGLLKYIQFKTTVCSVKKQPDFSTSGQWQVVTE-HEGKQQVD-VFDGVLVCTGHHTDPHL 156          
The following BLAST results are available for this feature:
BLAST of CX054052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GSOX4_ARATH9.723e-5160.13Flavin-containing monooxygenase FMO GS-OX4 OS=Arab... [more]
GSOX3_ARATH1.658e-5060.13Flavin-containing monooxygenase FMO GS-OX3 OS=Arab... [more]
GSOX2_ARATH2.829e-5060.76Flavin-containing monooxygenase FMO GS-OX2 OS=Arab... [more]
GSOX5_ARATH4.825e-5055.87Flavin-containing monooxygenase FMO GS-OX5 OS=Arab... [more]
GSOX1_ARATH2.098e-4557.59Flavin-containing monooxygenase FMO GS-OX1 OS=Arab... [more]
FMO5_RAT4.415e-1128.57Dimethylaniline monooxygenase [N-oxide-forming] 5 ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_9H10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9H10-O20-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX054052 ID=CX054052; Name=CX054052; organism=Citrus sinensis; type=EST; length=664bp
TGTCAATCCAGTCTATCAACGTGGCGGTGATCGGCGCCGGAGCCGCCGGT
TTAGTCGCGGCTCGCGAGCTCCGTCGCGAAGGCCATAAGGTTGTAGTCCT
GGAGAAAAGCAACCGAATTGGCGGCACATGGGTCTACACTCCTCGGGTGG
AATCCGACCAGCTCGGAGTGGACCCGAACCGAGCCGTCATTCATACCAGT
CTCTACAGCTCCCTCCGAACAAACCTGCCTCGAGAGGTGATGGGCTTTAC
GGACTACCCGTTCACGGCCCGGGATGATGGGTCGGGGGACCCGAGAAGGT
TTCCGGGTCATGCGGAGGTGTTGAGATACTTGGAGGAGTTTGTGAGTGAA
TTTGGGATTGACGAAATGGTGAGGTTTGAAAGTGAGGTGGTTAACGTTGG
TTTGATGGAAAATAACAAATGGAAAGTGAAGTCAAAATTGAGAAATGGTG
ATGGCGATTGTGATGAAATATATGATGCTGTTGTTGTTTGTAATGGGCAT
TACACTGAACCTCGCATTGCTGAGATTCCTGGTAATGTTGTTTATTTATT
TTTTGTGAGCTTTAGATTTGTCTGGAGTTAAAAAGAGCTTCGTGTTAATG
ACAAGGTTGACTGCTAGTGAGCTCTTGAGAGTAATGATACCGAATAATTA
TGGTTTTATGATTT
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