CX054036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX054036 vs. ExPASy Swiss-Prot
Match: EF1G_PRUAV (Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.171e-26 Identity = 64/128 (50.00%), Postives = 72/128 (56.25%), Query Frame = 2 Query: 437 AHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQVFQHLPPYPXXXXXXXXXXXXXXAYDLLLICAKAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHI 820 AHIEQWIDF SLEID NI+ WF PR G+AVYLP AEE NTHLASNTYLVGH VTLADII+TCNL GF++++ KSFTSEFPH+ Sbjct: 92 AHIEQWIDFGSLEIDANIISWFRPRFGYAVYLPP---------------------------------AEEAAISALKRALGALNTHLASNTYLVGHFVTLADIIVTCNLFFGFTKLMIKSFTSEFPHV 186
BLAST of CX054036 vs. ExPASy Swiss-Prot
Match: EF1G1_ORYSJ (Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.867e-25 Identity = 60/128 (46.88%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 437 AHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQVFQHLPPYPXXXXXXXXXXXXXXAYDLLLICAKAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHI 820 AHIEQWIDFS+ E+D N +W PR+GFA Y+ A +EE NTHLASNTYLVGHSVTLADI+MTCNL +GF+RI++K+FTSEFPH+ Sbjct: 92 AHIEQWIDFSATEVDANTGKWLFPRLGFAPYV---------------------------------AVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKNFTSEFPHV 186
BLAST of CX054036 vs. ExPASy Swiss-Prot
Match: EF1G2_ARATH (Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.752e-24 Identity = 62/139 (44.60%), Postives = 75/139 (53.96%), Query Frame = 2 Query: 404 DSYNCHSWFWQAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQVFQHLPPYPXXXXXXXXXXXXXXAYDLLLICAKAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHI 820 +S N S AHIEQWIDFSSLEID N+L+WF PR+G+A + A AEE NTHLASNT+LVGHSVTLADI+ CNL LGF+ +++K FTS FPH+ Sbjct: 81 NSLNGSSLIEYAHIEQWIDFSSLEIDANMLKWFAPRMGYAPF---------------------------------SAPAEEAAISALKRGLEALNTHLASNTFLVGHSVTLADIVTICNLNLGFATVMTKKFTSAFPHV 186
BLAST of CX054036 vs. ExPASy Swiss-Prot
Match: EF1G3_ORYSJ (Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.289e-24 Identity = 61/128 (47.66%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 437 AHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQVFQHLPPYPXXXXXXXXXXXXXXAYDLLLICAKAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHI 820 +HIEQW+DFS+ E+D NI RW PR+GF Y+P + EE NTHLASNTYLVGHSVTLADI+MTCNL GF RIL KSFTSEFPH+ Sbjct: 92 SHIEQWMDFSATEVDANIGRWLYPRLGFGPYVPVL---------------------------------EEFAITSLKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYYGFVRILIKSFTSEFPHV 186
BLAST of CX054036 vs. ExPASy Swiss-Prot
Match: EF1G2_ORYSJ (Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.904e-24 Identity = 60/128 (46.88%), Postives = 72/128 (56.25%), Query Frame = 2 Query: 437 AHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQVFQHLPPYPXXXXXXXXXXXXXXAYDLLLICAKAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHI 820 AHIEQW DFS+ E+D NI +W PR+G A Y+ A +EE NTHLASNTYLVGHSVTLADI+MTCNL +GF+RI++KSFTSEFPH+ Sbjct: 92 AHIEQWNDFSATEVDANIGKWLYPRLGIAPYV---------------------------------AVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKSFTSEFPHV 186
BLAST of CX054036 vs. ExPASy Swiss-Prot
Match: EF1G1_ARATH (Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.531e-23 Identity = 63/139 (45.32%), Postives = 72/139 (51.80%), Query Frame = 2 Query: 404 DSYNCHSWFWQAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQVFQHLPPYPXXXXXXXXXXXXXXAYDLLLICAKAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHI 820 +S N S A IEQWIDFSSLEI +ILRWF PR+GF Y A AEE NTHL SNTYLVGHS+TLADII CNL LGF+ +++K FTSEFPH+ Sbjct: 81 NSLNGSSLIEYAQIEQWIDFSSLEIYASILRWFGPRMGFMPY---------------------------------SAPAEEGAISTLKRALDALNTHLTSNTYLVGHSITLADIITVCNLNLGFATVMTKKFTSEFPHV 186 The following BLAST results are available for this feature:
BLAST of CX054036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX054036 ID=CX054036; Name=CX054036; organism=Citrus sinensis; type=EST; length=822bpback to top |