DR403360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNGC2_ARATH (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1) HSP 1 Score: 363.614 bits (932), Expect = 6.691e-100 Identity = 173/239 (72.38%), Postives = 193/239 (80.75%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLSKGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMRTRG 748 ++VFLHAVMAKKRKMQ+RCRDMEWWM +ERQRW +GGEDE+ELI DLP GLRR IKRYLC DLI KVPLF CDR +P V+SKDEKIIREGDPV RM+FI+RGR+KR QSLSKG++ATS LEPGG+LGDELLSWCLRRPF+DRLP SSATF C+E+IEAF L +++LRYITDHFRYKFANERLKRTARY SSNWRTWAAVNIQ AWRR R RTRG Sbjct: 448 IQVFLHAVMAKKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWNALGGEDELELIHDLPPGLRRDIKRYLCFDLINKVPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRVKRIQSLSKGVLATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIEAFSLGSEDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRG 686
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNGC4_ARATH (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2) HSP 1 Score: 274.248 bits (700), Expect = 5.338e-73 Identity = 126/236 (53.39%), Postives = 168/236 (71.19%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLSKGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMR 739 +KVFLHA +KK+ M L+ R++EWWM +YERQRWA M G DE E++++LPEGLRR IK +LCLDL+++VPLF CDRV+ L+++K E I +EGD V RM+F+VRG ++ Q L G+ + +L PG F GDELLSWCLRRPF++RLP SS+T +E+ EAFGLDA++++Y+T HFRY F NE++KR+ARY S WRTWAAV +Q AWRRY+ R Sbjct: 413 IKVFLHATTSKKQAMHLKMRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDGVKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHR 648
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.852e-41 Identity = 84/235 (35.74%), Postives = 136/235 (57.87%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRY 730 ++ +L ++ + +M+++ RD E WM Y++ +W G DE L+++LP+ LRR IKR+LCL L+++VPLF C+R++P +Y++ ++REGDPV M+FI+RGR++ + G S+L+ G F G+ELL+W L LP+S+ T + +EAF L A L+++ FR + + +++ T R+ S WRTWAA+ IQ AWRRY Sbjct: 430 MQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELKFVASQFR-RLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRY 663
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.419e-41 Identity = 83/248 (33.47%), Postives = 141/248 (56.85%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTE 769 ++ +L ++ + +M+++ RD E WM Y++ +W G DE +++ LP+ LRR IKR+LCL+L+++VPLF C+R++P ++++ I+REGDPV M+FI+RGR++ + G +L+ G F G+ELL+W L LP+S+ T + +EAF L+A+ L+++ FR + + ++++T R+ S WRTWA+ IQ AWRRY R + + E Sbjct: 419 MQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFR-RLHSRQVQQTFRFYSQQWRTWASCFIQAAWRRYSRRKNAELRRIEE 665
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 3.159e-41 Identity = 83/238 (34.87%), Postives = 138/238 (57.98%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMR 739 ++ +L ++ + +M+++ RD E WM Y++ +W G DE +++ LP+ LRR IKR+LCL+L+++VPLF C+R++P +Y++ I+REGDPV M+FI+RGR++ + G +L+ G F G+ELL+W L LP+S+ T + +EAF L+A+ L+++ FR + + ++++T R+ S WRTWAA IQ AWRR+ R Sbjct: 425 MQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFR-RLHSRQVQQTFRFYSQQWRTWAACFIQAAWRRHLRR 661
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.388e-41 Identity = 85/235 (36.17%), Postives = 133/235 (56.60%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRY 730 ++ +L + + +M+++ RD E WM YE+ +W G DE L+ +LP+ LRR IKR+LCL L+ +VP+F CDR++P++Y+++ I+REGDPV M+FI+RG++ + G + + L G F G+ELL+W L LP S+ T + +EAF L A +L+++ FR + +++L+ T RY S W+TWAA IQ AWRRY Sbjct: 403 MQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVASQFR-RLHSKQLRHTFRYYSQQWKTWAACFIQAAWRRY 636
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 7.037e-41 Identity = 84/240 (35.00%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMRTR 745 ++ +L ++ + +M+++ RD E WM Y++ +W G DE L+++LP+ LRR IKR+LCL L+++VPLF C+R++P ++++ ++REGDPV M+FI+RGR++ + G S+L+ G F GDELL+W L LP+S+ T + +EAF L A L+++ FR + + +++ T R+ S WRTWAA +Q AWRRY R + Sbjct: 431 MQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFR-RLHSRQVQHTFRFYSQQWRTWAACFMQAAWRRYIKRKK 669
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 9.191e-41 Identity = 87/235 (37.02%), Postives = 131/235 (55.74%), Query Frame = 2 Query: 41 FLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMR 739 +L + ++ +M++R RD E WM YE+ RW G +E L+++LP+ LRR IKR+LCLDL+KKVPLF CDR+RP++Y+++ +IREGDPV M+F++RGR+ + G L+ F G++LL W L P S+ T + +EAF L A++L+ + FR + +++L+ T R+ S WRTW+ IQ AWRRY R Sbjct: 393 YLESTTVREEEMRVRKRDAEQWMSHRMLPEDLRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGEDLLPWALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSVASQFR-RLHSKQLQHTFRFYSVQWRTWSVSFIQAAWRRYCRR 626
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 3.493e-40 Identity = 84/248 (33.87%), Postives = 137/248 (55.24%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTE 769 ++ +L ++ + + +L+ RD E WM + + +W G DE ++ LP LRR I+R+LCLDL+++VPLF C+R+ + ++ I+REGDPV M+FI+RG+++ + G + L PG F G+ELL+W L LP+S+ T +E +EAF L A +L+++ + FR + +++L+ T RY S WRTWAA +Q AWRRY+ + +S+ E Sbjct: 398 MQTYLQSITVRLEEWRLKRRDTEEWMGHRLLPQNLRERVRRFVQYKWLATRGVDEETILHSLPADLRRDIQRHLCLDLVRRVPLFAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLFIIRGKLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTVNLPSSTRTVRALEEVEAFALQAGDLKFVANQFR-RLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAKSLSLAE 644
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.327e-39 Identity = 83/235 (35.32%), Postives = 130/235 (55.32%), Query Frame = 2 Query: 41 FLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMR 739 +L + ++ +M++R RD E WM YE+ +W G +E L+++LP+ LRR IKR+ CLDL+KKVPLF CD+++P++Y+++ IREGDPV M+F++RG++ + G L+P F G++LL+W L P S+ T + +EAF L A +L+ + FR + +++L+ T R+ S WRTW A IQ AWRR+ R Sbjct: 394 YLESTTVREEEMRVRKRDAEQWMSHRMLPDDLRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNAVYLKPSDFCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVASQFR-RLHSKQLQHTFRFYSVQWRTWGASFIQAAWRRHCRR 627 The following BLAST results are available for this feature:
BLAST of DR403360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403360 ID=DR403360; Name=DR403360; organism=Citrus sinensis; type=EST; length=773bpback to top |