DR403324

Overview
NameDR403324
Unique NameDR403324
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length213
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403324 vs. ExPASy Swiss-Prot
Match: M030_ARATH (Uncharacterized mitochondrial protein AtMg00030 OS=Arabidopsis thaliana GN=AtMg00030 PE=4 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 1.440e-14
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = -2
Query:    3 PWPFASESVLPSQCPDIHPMHS 68
            PWPFASESVLPSQCP IHPMHS
Sbjct:   36 PWPFASESVLPSQCPGIHPMHS 57          

HSP 2 Score: 46.595 bits (109), Expect = 1.440e-14
Identity = 23/33 (69.70%), Postives = 24/33 (72.73%), Query Frame = -3
Query:   53 KSKERRLATEXXYXXPIGDPWITDWYLTHGLSP 151
            KSKERRLATE  Y  PIGDPWITD     G+SP
Sbjct:    9 KSKERRLATELGYGFPIGDPWITD-----GISP 36          
The following BLAST results are available for this feature:
BLAST of DR403324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
M030_ARATH1.440e-1495.45Uncharacterized mitochondrial protein AtMg00030 OS... [more]
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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244J16 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244J16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403324 ID=DR403324; Name=DR403324; organism=Citrus sinensis; type=EST; length=213bp
GGGGAATGCATTGGATGGATGTCCGGGCATTGAGAAGGAAGGACGCTTTC
AGAGGCGAAAGGCCATGGGTGAGATACCAGTCTGTGATCCATGGATCTCC
GATCGGGANNNCGTATCNNNGCTCCGTGGCTAGTCTGCGCTCTTTGGACT
TTTCAAACTTAGCGAACTGAAACATCTGAGTAGCAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA
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