EY662741

Overview
NameEY662741
Unique NameEY662741
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7708 contig Csv1_Contig7708:236..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662741 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.890e-23
Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 3
Query:   33 LFYENQWTDVNPISGGLVVNIGDFLQVISNDKLKSVDHRVAANVHATSRVSVACFFTGHATETQKPFGPIKELISEENRPVYREFLVGEYFSKYFSKELEGKS 341
            + ++  W DV P+ G LVVN+GD LQ+I+NDK  SV+HRV ANV A  R+SVACFF+ +     + +GPIKE++SEEN P YR+  + EY   Y SK  +G S
Sbjct:  257 VLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANV-AGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTS 358          
BLAST of EY662741 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.341e-23
Identity = 54/108 (50.00%), Postives = 73/108 (67.59%), Query Frame = 3
Query:   42 ENQWTDVNPISGGLVVNIGDFLQVISNDKLKSVDHRVAANVHATSRVSVACFFTGHATETQKPFGPIKELISEENRPVYREFLVGEYFSKYFSKELEGKSAGLKQFEI 365
            E  W DV  +SG L++NIGD LQ+I+NDK  S++HRV AN    +RVSVACFFT       + +GPI+EL+SEEN P YRE  + +Y + + +K L+G SA L  F+I
Sbjct:  263 EGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEENPPKYRETTIKDYATYFNAKGLDGTSA-LLHFKI 369          
BLAST of EY662741 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.222e-22
Identity = 51/101 (50.50%), Postives = 65/101 (64.36%), Query Frame = 3
Query:   42 ENQWTDVNPISGGLVVNIGDFLQVISNDKLKSVDHRVAANVHATSRVSVACFFTGHATETQKPFGPIKELISEENRPVYREFLVGEYFSKYFSKELEGKSA 344
            E  W DV  + G L++NIGD LQ+I+NDK  S+ HRV AN    +RVSVACFF  H     + +GPIKEL+SEEN P YRE  + +Y + +  K L G SA
Sbjct:  263 EGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFHTHVKPNPRVYGPIKELVSEENPPKYRETTIRDYATYFNGKGLGGTSA 363          
BLAST of EY662741 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.332e-20
Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 3
Query:   33 LFYENQWTDVNPISGGLVVNIGDFLQVISNDKLKSVDHRVAANVHATSRVSVACFFTGHATETQKPFGPIKELISEENRPVYREFLVGEYFSKYFSKELEGKSAGLKQFEI 365
            + ++N W DV P  G LVVNIGDFLQ++SNDK  SV+HR  +N +  SR+S+ CFF     ++ K +GPI EL+SE+N P YR   V ++ S   ++ L+G SA L +++I
Sbjct:  255 VLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISN-NVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTVKDHTSYLHNRGLDGTSA-LSRYKI 363          
BLAST of EY662741 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.472e-19
Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 3
Query:   33 LFYENQWTDVNPISGGLVVNIGDFLQVISNDKLKSVDHRVAANVHATSRVSVACFFTGHATETQ-----KPFGPIKELISEENRPVYREFLVGEYFSKYFSKELEGKSA 344
            +  ENQW DV  I G LV+NI D LQ+I+NDK KSV+HRV AN     R+SVA  F G  T+TQ     + +GPIKELISEEN P+Y+E  V ++ +  F+K  +  S+
Sbjct:  287 ILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLAN-KVGPRISVAVAF-GIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDFITIRFAKRFDDSSS 393          
BLAST of EY662741 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.800e-17
Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 3
Query:   33 LFYENQWTDVNPISGGLVVNIGDFLQVISNDKLKSVDHRVAANVHATSRVSVACFFTGHATE-TQKPFGPIKELISEENRPVYREFLVGEYFSKYFSKELEGKSA 344
            + Y+  W DV P    L+ N+GDFLQ+ISNDK  S++HR+ AN     R+SVACFF    T  + + +GPIKEL+SE N P YR+    E  + Y +++  G S+
Sbjct:  250 VLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFFVHTFTSPSSRVYGPIKELLSELNPPKYRD-TTSESSNHYVARKPNGNSS 353          
BLAST of EY662741 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.072e-12
Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = 3
Query:   33 LFYENQWTDVNPISGGLVVNIGDFLQVISNDKLKSVDHRVAANVHATSRVSVACFFTGHATETQKPFGPIKELISEENRPVYREFLVGEYFSKYFSKELEGK 338
            L  ++QW DV P+   +V+N+GD L+VI+N K KSV HRV A    T R+S+A F+   +     P   + E  +EEN+ +Y +F+  +Y   Y   + + K
Sbjct:  197 LLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGT-RMSLASFYNPASDAVIYPAPALVERDAEENKQIYPKFVFDDYMKLYARLKFQAK 297          
BLAST of EY662741 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.517e-11
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 3
Query:   33 LFYENQWTDVNPISGGLVVNIGDFLQVISNDKLKSVDHRVAANVHATSRVSVACFFTGHATETQKPFGPIKELISEENRPVYREFLVGEYFSKYFSKELEGK 338
            L  + QW DV P+   +VVN+GD L+VI+N K KSV HRV A     +R+S+A F+   +     P   + E  +EEN+ VY +F+  +Y   Y   + + K
Sbjct:  197 LLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDG-ARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAK 297          
BLAST of EY662741 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.294e-11
Identity = 36/102 (35.29%), Postives = 56/102 (54.90%), Query Frame = 3
Query:   33 LFYENQWTDVNPISGGLVVNIGDFLQVISNDKLKSVDHRVAANVHATSRVSVACFFTGHATETQKPFGPIKELISEENRPVYREFLVGEYFSKYFSKELEGK 338
            L  + QW DV P+   +V+N+GD L+VI+N K +SV+HRV A    T R+S+A F+   +     P   + E  +EE   VY +F+  +Y   Y   + + K
Sbjct:  197 LLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTDGT-RMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFVFEDYMKLYAGLKFQPK 297          
BLAST of EY662741 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.608e-11
Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 3
Query:   33 LFYENQWTDVNPISGGLVVNIGDFLQVISNDKLKSVDHRVAANVHATSRVSVACFFTGHATETQKPFGPI--KELISEENRPVYREFLVGEYFSKYFSKELEGKS---AGLKQFEI 365
            L  + +W +V P+   +VVNIGD L+VI+N K KSV HRV A     +R+S+A F+   +     P   +  KE   EE + +Y +F+  +Y + Y  K+ E K      +K  EI
Sbjct:  201 LLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTDG-NRMSIASFYNPGSDAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMNLYIRKKFEAKEPRFEAMKSMEI 315          
The following BLAST results are available for this feature:
BLAST of EY662741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ACCH1_ARATH4.890e-2350.491-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH3_ARATH8.341e-2350.001-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH9.222e-2250.501-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH3_SOLLC1.332e-2045.951-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
DV4H_CATRO1.472e-1949.54Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
GSL_ARATH1.800e-1743.81Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
ACCO4_PETHY5.072e-1236.271-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_PETHY2.517e-1137.251-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO_PRUMU4.294e-1135.291-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO2_DORSP5.608e-1135.341-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-047-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662741 ID=EY662741; Name=EY662741; organism=Citrus sinensis; type=EST; length=511bp
TTTCTCAACCCACGCGTCCGCGGTGGCCCTCACTCTTCTATGAAAATCAG
TGGACTGATGTTAACCCTATATCAGGAGGCTTGGTGGTAAACATAGGGGA
CTTTCTCCAGGTTATATCAAACGATAAGCTCAAGAGTGTTGACCATAGAG
TTGCGGCCAATGTTCATGCCACTTCAAGGGTTTCCGTGGCATGCTTTTTC
ACAGGACACGCCACTGAAACGCAGAAGCCCTTTGGGCCGATCAAAGAGTT
GATCTCTGAAGAAAATCGGCCTGTTTACAGAGAATTTCTAGTGGGAGAAT
ATTTCAGCAAATATTTTTCTAAAGAACTTGAAGGCAAGTCTGCTGGCCTG
AAGCAGTTCGAGATTTAAAAGTAGCAATTAATTTTGAATAGAGTTTTCAA
ATGTTGTCTAATCAATAAATTGAGGATGTACTGAGGTTAATATCTGCCAT
TCCGAATAACTTCAAACTACGTGCATGTTTCAAATAAGGAAAAAAAAAAA
AAAAAAAAAAA
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