DR403294

Overview
NameDR403294
Unique NameDR403294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:11..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.920e-55
Identity = 112/182 (61.54%), Postives = 135/182 (74.18%), Query Frame = 2
Query:  155 NDGLVRIGLRKKKLGQINRLVGQTVSKEEETTRTPVRRYNLHGSLGDS-DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            NDGL+R+GL+K KL   NRL  +  SK+ E  +   R+YN  G+LG+S DTDIVAL N++DAQY+GE++IGTP Q FTVIFDTGSSNLWV   +C FSV                 +NGTSA+I+YGTGA+SGFFS DNVKVGDLVVK Q FIEAT+E S+TFL AKFDG+LGLGFQEI+ G
Sbjct:   27 NDGLLRVGLKKIKLDPENRLAARVESKDAEILKAAFRKYNPKGNLGESSDTDIVALKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWV-LCECLFSVACHFHARYKSSRSSSYKKNGTSASIRYGTGAVSGFFSYDNVKVGDLVVKEQVFIEATREPSLTFLVAKFDGLLGLGFQEIAVG 207          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 8.920e-53
Identity = 106/173 (61.27%), Postives = 126/173 (72.83%), Query Frame = 2
Query:  179 LRKKKLGQINRLVGQTVSKEEETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            L+K+K+  +N   G+     +   R   R+Y + G+  DSD +++AL N+MDAQYFGE+ IGTP Q FTVIFDTGSSNLWVPS+KCYFSV                 +NG SAAIQYGTG+ISGFFSQD+VK+GDL+VK QDFIEATKE  ITFLAAKFDGILGLGFQEIS G
Sbjct:    1 LKKRKVNILNH-PGEHAGSNDANAR---RKYGVRGNFRDSDGELIALKNYMDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACLFHSKYRSTDSTTYKKNGKSAAIQYGTGSISGFFSQDSVKLGDLLVKEQDFIEATKEPGITFLAAKFDGILGLGFQEISVG 169          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 3.748e-51
Identity = 105/180 (58.33%), Postives = 130/180 (72.22%), Query Frame = 2
Query:  158 DGLVRIGLRKKKLGQINRLVGQTVSKEEETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            +GLVRI L+K+ + + +R+  + +S EE   R  +R  N  G  G  + DIVAL N+M+AQYFGE+ +GTP Q FTVIFDTGSSNLWVPSAKCYFS+                 +NG  AAIQYGTG+I+GFFS+D+V VGDLVVK+Q+FIEATKE  +TF+ AKFDGILGLGFQEIS G
Sbjct:   26 EGLVRIALKKRPIDENSRVAAR-LSGEEGARRLGLRGANSLGG-GGGEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACFFHSRYKSGQSSTYQKNGKPAAIQYGTGSIAGFFSEDSVTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVG 203          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.983e-49
Identity = 102/184 (55.43%), Postives = 128/184 (69.57%), Query Frame = 2
Query:  158 DGLVRIGLRKKKLGQINRLVGQTVSKEEE---TTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNGK 700
            +GLVRI L+K+ + + +R+       EE+   +   P+R         + + DIVAL N+M+AQYFGE+ +GTP Q FTVIFDTGSSNLWVPSAKCYFS+                 +NG  AAIQYGTG+I+G+FS+D+V VGDLVVK+Q+FIEATKE  ITFL AKFDGILGLGF+EIS GK
Sbjct:   28 EGLVRIALKKRPIDRNSRVATGLSGGEEQPLLSGANPLR--------SEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGK 203          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.202e-43
Identity = 92/182 (50.55%), Postives = 117/182 (64.29%), Query Frame = 2
Query:  155 NDGLVRIGLRKKKLGQINRLVGQTVSKEEETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNGK 700
            +DG +R+ L KK+L            KE+ T     ++ N     G SD+D V L ++++ QY+G + +G+P Q FTVIFDTGSSNLWVPSAKCYFS+                  +G +  I YG+GAISGFFS+DNV VGDLVVKNQ FIEAT+E S+TF+  KFDGILGLG+ EIS GK
Sbjct:   26 SDGFLRVNLNKKRL-----------DKEDLTAAKLAQQGNRLLKTGSSDSDPVPLVDYLNTQYYGVIGLGSPPQNFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYNSKKSSSYKADGETCKITYGSGAISGFFSKDNVLVGDLVVKNQKFIEATRETSVTFIIGKFDGILGLGYPEISVGK 196          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.163e-34
Identity = 82/187 (43.85%), Postives = 110/187 (58.82%), Query Frame = 2
Query:  137 AAFALPNDGLVRIGLRKKKLGQINRLVGQTVSKEEETTRTPVR-RYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            +A AL ND LVRI L  KK   I R +  +  + EE        +YNL     ++ T    L N++DAQY+GE+ +GTP Q FTV+FDTGSSNLWVPS  C    +                 +NGT+ AIQYG+G++SG+ SQD   +GDL + +Q F EA K+  + F+AAKFDGILG+ +  IS
Sbjct:   10 SALALTNDALVRIPL--KKFRSIRRQLTDSGKRAEELLADHHSLKYNLSFPASNAPTP-ETLKNYLDAQYYGEIGLGTPPQPFTVVFDTGSSNLWVPSIHCSLLDIACLLHHKYNSGKSSTYVKNGTAFAIQYGSGSLSGYLSQDTCTIGDLAIDSQLFGEAIKQPGVAFIAAKFDGILGMAYPRIS 193          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.524e-33
Identity = 78/186 (41.94%), Postives = 107/186 (57.53%), Query Frame = 2
Query:  137 AAFALPNDGLVRIGLRKKKLGQINRLVGQTVSKEEETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFS-VXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            A FA  +D +VRI L  KK   I R +  +    E+         +  G    +      L N+MDAQY+GE+ +GTP Q FTV+FDTGSSNLW+PS  C F+ +                 +NGT  AIQYG+G++SG+ SQD+  +GD+VV+ Q F EA K+  + F+AAKFDGILG+ +  IS
Sbjct:   10 AVFAWTSDAIVRIPL--KKFRSIRRTLSDSGLNVEQLLAGTNSLQHNQGFPSSNAPTPETLKNYMDAQYYGEIGLGTPVQMFTVVFDTGSSNLWLPSIHCSFTDIACLLHHKYNGAKSSTYVKNGTEFAIQYGSGSLSGYLSQDSCTIGDIVVEKQLFGEAIKQPGVAFIAAKFDGILGMAYPRIS 193          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.524e-33
Identity = 71/129 (55.04%), Postives = 85/129 (65.89%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNGK 700
            L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C+   +                  NGT  AI YGTG++SGF SQD V +G+L +KNQ F EA K+  ITF+AAKFDGILG+ F  IS  K
Sbjct:   70 LKNYMDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSVHCHLLDIACLLHHKYDASKSSTYVENGTEFAIHYGTGSLSGFLSQDTVTLGNLKIKNQIFGEAVKQPGITFIAAKFDGILGMAFPRISVDK 198          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CARP_NANOT (Vacuolar protease A OS=Nannizzia otae (strain CBS 113480) GN=PEP2 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.680e-32
Identity = 77/179 (43.02%), Postives = 105/179 (58.66%), Query Frame = 2
Query:  173 IGLRKKKLGQINRLVGQTVSKEEETT---RTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNGK 700
            I ++ K LGQ  + +G    + E+     +TP+   + H          V ++NF++AQYF E+SIGTP QTF V+ DTGSSNLWVP   C  S+                 RNGTS AI+YG+G++ GF SQDNV++GD+ +KNQ F EAT E  + F   +FDGILG+G+  IS  K
Sbjct:   39 IDVQIKSLGQ--KYMGIRPGQHEQQMFKEQTPIEAESGHN---------VLIDNFLNAQYFSEISIGTPPQTFKVVLDTGSSNLWVPGKDCS-SIACFLHSTYDSSASSTFTRNGTSFAIRYGSGSLEGFVSQDNVQIGDMKIKNQLFAEATSEPGLAFAFGRFDGILGMGYDTISVNK 205          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.526e-31
Identity = 79/190 (41.58%), Postives = 108/190 (56.84%), Query Frame = 2
Query:  155 NDGLVRIGLRKKKLGQINRLVGQTV-SKEEETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKV------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNGK 700
            +  L+RI LRK     I R + +   S E+   + P+ +Y++  S    +     L N++DAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NGTS  I YG+G++SG+ SQD V V      G + V+ Q F EATK+  + F+AAKFDGILG+G+  IS  K
Sbjct:   18 SSALIRIPLRK--FTSIRRTMTEVGGSVEDLILKGPITKYSMQSSPRTKEPVSELLKNYLDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDLGGIKVEKQIFGEATKQPGVVFIAAKFDGILGMGYPFISVNK 205          
The following BLAST results are available for this feature:
BLAST of DR403294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
ASPR_CUCPE1.920e-5561.54Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
CYPR1_CYNCA8.920e-5361.27Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPR1_ORYSJ3.748e-5158.33Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPR_HORVU5.983e-4955.43Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPRX_ORYSJ2.202e-4350.55Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
CATD_CHIHA4.163e-3443.85Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]
CATD_CLUHA3.524e-3341.94Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1[more]
CATD_CHICK3.524e-3355.04Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1[more]
CARP_NANOT8.680e-3243.02Vacuolar protease A OS=Nannizzia otae (strain CBS ... [more]
CATD_RAT2.526e-3141.58Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H22 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403294 ID=DR403294; Name=DR403294; organism=Citrus sinensis; type=EST; length=700bp
GGGGTCGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCT
CTTTTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATT
CGGGCTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTT
GCCAAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGGTC
AGATCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGACG
AGAACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGA
TACTGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGG
AGGTTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACA
GGAAGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTC
TTGCTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAA
GGAATGGGACATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGT
TTCTTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCA
GGATTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCA
AGTTTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAAATGGAAAA
back to top