DR403237

Overview
NameDR403237
Unique NameDR403237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:23..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.129e-40
Identity = 85/182 (46.70%), Postives = 126/182 (69.23%), Query Frame = 3
Query:  210 SKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST---HGV-RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVI 743
            +K+ +T EEEE    AM L SA VLP V ++ + LD+L++I K+GPGA +S SE+A+Q+PT+NP+ A  MLDR+L LL S+++L C+       G+ RLYSLAPV K+   +++GVSM   + ++ DKV+M  W+ LKD +LEG + +NKA GM  ++Y G D RFN+VFN GM   ++ ++
Sbjct:    8 NKNSMTKEEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPD-APVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIM 188          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.290e-40
Identity = 90/181 (49.72%), Postives = 120/181 (66.30%), Query Frame = 3
Query:  192 MGSFTKSKSKVTN-EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            MGS  +++   T   +EE +  AM L SA VLP + +  + LD+L+I+ KAGPGA LS SEIAS +PTKNP+ A  MLDR+L LL S++IL CS          RLY LAPV K+   +++GVS+ P   ++ DKV+M  W+ LKD ILEG + +NKA GM  ++Y GTD RFN+VFN GM
Sbjct:    1 MGSTGETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPD-APVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGM 180          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.558e-40
Identity = 89/181 (49.17%), Postives = 120/181 (66.30%), Query Frame = 3
Query:  192 MGSFTKSKSKVTN-EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            MGS  +++   T   +EE +  AM L SA VLP + +  + LD+L+I+ KAGPGA LS SEIAS +PTKNP+ A  MLDR+L LL S++IL CS          RLY LAPV K+   +++GVS+ P   ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFN GM
Sbjct:    1 MGSTGETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPD-APVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGM 180          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.248e-39
Identity = 88/185 (47.57%), Postives = 124/185 (67.03%), Query Frame = 3
Query:  192 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTS 734
            MGS  +S   +T  E+E +  AM L SA VLP V +A V LD+L+I+ K+GPGA +S SE+A+Q+PTKNPE A  MLDR+  LL ++++L C+  T       RLYSLAPV K+   + +GVS+ P + ++ DKV+M  W+ L D +L+G + +NKA GM  ++Y GTD RFN+VFN GM   T+
Sbjct:    1 MGSINQS---LTQTEDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPE-APVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTT 181          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.744e-39
Identity = 83/174 (47.70%), Postives = 118/174 (67.82%), Query Frame = 3
Query:  210 SKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            +   +T  E+E +  AM L SA VLP V ++ + LD+L+I+ KAGPGA +S SE+A+Q+PTKNPE A  MLDR+L LL ++++L C+  T       RLYSLAPV K    + +GVS+ P + ++ DKV+M  W+ L D +L+G + +NKA GM  ++Y GTD RFN+VFN GM
Sbjct:    4 TNQNLTQTEDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPE-APVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGM 176          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.091e-39
Identity = 84/174 (48.28%), Postives = 118/174 (67.82%), Query Frame = 3
Query:  234 EEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST---HGV-RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVI 743
            EEE    AM L SA VLP V ++ + LD+L++I KAGPGA +S SE+A+Q+PT NPE A  MLDR+L LL ++++L C  +     GV RLY LAPV K+   + +GVSM P + ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  +
Sbjct:    3 EEEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPE-APIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITM 175          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38
Identity = 85/187 (45.45%), Postives = 122/187 (65.24%), Query Frame = 3
Query:  195 GSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHG----VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVI 743
            G    + ++V++EE  ++  AM L SA VLP V +A + LD+L+I+ KAGPG  LS ++IASQ+PTKNP+ A  MLDR+L LL S++IL  S  T       RLY L PV K+   ++ GVS+ P   ++ DKV++  W+ LKD +LEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  +
Sbjct:    5 GETQMTPTQVSDEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPD-APVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITM 188          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.946e-38
Identity = 88/181 (48.62%), Postives = 120/181 (66.30%), Query Frame = 3
Query:  192 MGSFTKSKSKVTN-EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHG----VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            MGS  +++   T+  +EE    AM L SA VLP + ++ + LD+L+II KAGPGA++S  EIASQ+PT NP+ A  MLDR+L LL  + IL CS  T       RLY LA VAKY V +++GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM
Sbjct:    1 MGSTGETQITPTHISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPD-APVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGM 180          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.946e-38
Identity = 86/183 (46.99%), Postives = 122/183 (66.67%), Query Frame = 3
Query:  192 MGSFTKSKSKVTN---EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            MGS T S++++T     +EE    AM L SA VLP V +A + LD+L+I+ KAGPGA LS  E+A+Q+PT+NPE A  MLDR+  LL S+++L C+          RLY LAPV K+ V +++GVS+     ++ DK++M  W+ LKD +LEG + +NKA GM  ++Y GTD RFN++FN GM
Sbjct:    1 MGS-TGSETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPE-APVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGM 181          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.168e-37
Identity = 85/186 (45.70%), Postives = 122/186 (65.59%), Query Frame = 3
Query:  198 SFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST---HGV-RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVI 743
            S T +  ++ ++EEE +  AM L SA VLP V ++ + LD+L++I KAG GA +S +E+A+Q+ T N E A  MLDR+L LL S+ IL C   T    GV RLY LAPV K+   +++GVSM P   ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  +
Sbjct:    2 SSTANNPQINSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAE-AHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITM 186          
The following BLAST results are available for this feature:
BLAST of DR403237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT1_CATRO1.129e-4046.70Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_POPKI4.290e-4049.72Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM9.558e-4049.17Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CAPCH1.248e-3947.57Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_CAPAN4.744e-3947.70Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_COFCA8.091e-3948.28Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_PRUDU6.850e-3845.45Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_MEDSA8.946e-3848.62Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_EUCGU8.946e-3846.99Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT2_OCIBA1.168e-3745.70Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244E13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244E13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403237 ID=DR403237; Name=DR403237; organism=Citrus sinensis; type=EST; length=745bp
GGGGACGGAGTGAGATTCTCACTCCCTTCTCATTTAAAAGAAATAAACAC
TGGTATGGAAGGAATTCACGCTCCTCACCCACTCCCGTAAGTAAAGACAG
CATAAACACAGCATAAGAGTAGTGGTATAAAAGATTCAAAAACACTAAGC
TAAGAGCAAAGCAAAGCAGGAGCAAGAAATTAAACGCGCAAATGGGTTCT
TTCACTAAGAGCAAATCAAAAGTGACCAATGAAGAGGAAGAGGTATATTC
ACATGCCATGGTACTGGGAAGTGCAATAGTGCTACCCGCGGTTTTTCAAG
CAGTAGTAAATCTTGATGTTCTTGATATCATAAACAAAGCTGGTCCTGGT
GCTGAGCTTTCTGCTTCAGAGATTGCTTCTCAAATTCCCACCAAAAATCC
TGAGGGTGCTGCCAAGATGTTGGATCGGGTTCTCGGGCTTCTGGTGAGCT
TCAATATCCTTTGTTGCTCTTTCAGTACTCATGGAGTAAGGCTCTACAGT
CTCGCTCCTGTCGCTAAATACTATGTGAGTGATCAAAACGGCGTCTCAAT
GCGTCCCTATATGAACTTGTCTCTTGACAAAGTAATGATGCCTGGCTGGT
TCCAATTAAAAGACCAAATTCTTGAAGGAGAACTTTCGTATAATAAAGCC
CTCGGAATGGATTTCTACGATTATCTGGGCACCGACTCCAGGTTCAATGA
AGTTTTCAACAATGGAATGATCGGCCAGACTTCTTTTGTAATCAA
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