DR403219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403219 vs. ExPASy Swiss-Prot
Match: PSB4_ARATH (Proteasome subunit beta type-4 OS=Arabidopsis thaliana GN=PBG1 PE=1 SV=2) HSP 1 Score: 345.125 bits (884), Expect = 2.463e-94 Identity = 162/189 (85.71%), Postives = 180/189 (95.24%), Query Frame = 3 Query: 207 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 773 QRT PYVTGTS+VA+KYKDG+LMA+DMGGSYGST+RYK++ER+K IGKHSLLGASGEISDFQE+LR LDEL L DNMWDDGNSLGPKE+H+YLTRVMYNRRNKF+PLWN+LVLGGVKNG+ YLGMVSMIGV+FED HVATGFGNHLARPILRDEWH +LS+EDGVKLLEKCMRVLLYRDRSA+NKLQI Sbjct: 22 QRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGVKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRSAINKLQI 210
BLAST of DR403219 vs. ExPASy Swiss-Prot
Match: PSB4_BOVIN (Proteasome subunit beta type-4 OS=Bos taurus GN=PSMB4 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.198e-48 Identity = 92/193 (47.67%), Postives = 140/193 (72.54%), Query Frame = 3 Query: 201 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 773 PI RTQ P VTGTSV+ LK++ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + + DG+S PK +HS+LTR MY+RR+K +PLWN++V+GG +G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL YRD + N+ QI Sbjct: 42 PITRTQNPMVTGTSVLGLKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQI 234
BLAST of DR403219 vs. ExPASy Swiss-Prot
Match: PSB4_XENLA (Proteasome subunit beta type-4 (Fragment) OS=Xenopus laevis GN=psmb4 PE=2 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 5.944e-48 Identity = 87/193 (45.08%), Postives = 142/193 (73.58%), Query Frame = 3 Query: 201 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 773 P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++++LGASG+ +D+Q L + +D++++ + + DG++ PK +HS+LTRVMYNRR+K +PLWN++V+GG NG+ +LG V +GV +E +ATGFG +LA+P+LR+ E LS E+ +L+++CM+VL YRD + N+ +I Sbjct: 20 PVRHTLNPMVTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTILGASGDYADYQYLKQVIDQMVIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGESFLGYVDKLGVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKVLYYRDARSYNRFEI 212
BLAST of DR403219 vs. ExPASy Swiss-Prot
Match: PSB4_HUMAN (Proteasome subunit beta type-4 OS=Homo sapiens GN=PSMB4 PE=1 SV=4) HSP 1 Score: 190.274 bits (482), Expect = 1.014e-47 Identity = 90/193 (46.63%), Postives = 139/193 (72.02%), Query Frame = 3 Query: 201 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 773 PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG +G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL YRD + N+ QI Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQI 234
BLAST of DR403219 vs. ExPASy Swiss-Prot
Match: PSB4_MOUSE (Proteasome subunit beta type-4 OS=Mus musculus GN=Psmb4 PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.324e-47 Identity = 90/193 (46.63%), Postives = 139/193 (72.02%), Query Frame = 3 Query: 201 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 773 PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG +G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL YRD + N+ QI Sbjct: 42 PITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQI 234
BLAST of DR403219 vs. ExPASy Swiss-Prot
Match: PSB4_RAT (Proteasome subunit beta type-4 OS=Rattus norvegicus GN=Psmb4 PE=1 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 2.259e-47 Identity = 90/196 (45.92%), Postives = 139/196 (70.92%), Query Frame = 3 Query: 192 PNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 773 P PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + ++ DG+S P+ +HS+LTR MY+RR+K +PLWN+ V+GG G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL YRD + N+ Q+ Sbjct: 38 PARPITRTQNPMVTGTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTKVIGGYAGGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQV 233
BLAST of DR403219 vs. ExPASy Swiss-Prot
Match: PSB4_DICDI (Proteasome subunit beta type-4 OS=Dictyostelium discoideum GN=psmB4-1 PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.239e-45 Identity = 86/191 (45.03%), Postives = 133/191 (69.63%), Query Frame = 3 Query: 207 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 773 Q+T P VTGTSV+A+KY G++M +DM SYGS R+ S ER+K G ++++GASGE SDFQ + L++L+ D+ DDG+ L +E+ +YL RV+YN+RN+ +PLWN+LV+ G + G+ +LG V ++G ++D + TG+G+H+A P+LR E N++ E +L++ C+RVL YRD + K+QI Sbjct: 35 QKTLDPIVTGTSVIAIKYDKGVVMGSDMLLSYGSLARFNSTERMKKFGGYTIVGASGEYSDFQSITNTLNDLVTDDHCMDDGSKLSSEEIWNYLARVLYNQRNRGNPLWNTLVVMGYQGGKSFLGKVDLVGTCYKDDIITTGYGSHIALPLLRKARDENPNMNLEQAKQLIQDCLRVLFYRDARSSKKIQI 225
BLAST of DR403219 vs. ExPASy Swiss-Prot
Match: PSB4_SCHPO (Probable proteasome subunit beta type-4 OS=Schizosaccharomyces pombe GN=SPBC577.10 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.675e-42 Identity = 86/198 (43.43%), Postives = 129/198 (65.15%), Query Frame = 3 Query: 201 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV--KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 773 PIQRT P VTG+SV+ALK+ DG+++AAD SYGS R+ VER+ +G ++++GA G+ISD+Q++ R L++L + + + DG +L P +H YL++V+Y RRNK DP WN L++ GV +N + Y+ + G + +ATGF HLA P+LR D W + LS E +++CMRVL YRD ++NK + Sbjct: 32 PIQRTVQPIVTGSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQIQRLLEKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAFADLRGTTYSAPAIATGFAMHLALPMLRKATDDDRW-KTLSKESARATIDECMRVLFYRDARSLNKFSV 228
BLAST of DR403219 vs. ExPASy Swiss-Prot
Match: PSB4_YEAST (Proteasome component PRE4 OS=Saccharomyces cerevisiae GN=PRE4 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.373e-36 Identity = 83/198 (41.92%), Postives = 128/198 (64.65%), Query Frame = 3 Query: 201 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELI---LYDN-MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPIL-----RDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVN 761 P+ TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ VER+ P+G ++++G SG+ISD Q + R L +L+ YDN + D +L P + YL VMY RR+K +PLWN++++ GV+ NG ++L V+++GV + +ATGFG H+A P+L R+ + + + + MRVL YRD RS+ N Sbjct: 30 PMVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVLYYRDARSSRN 227
BLAST of DR403219 vs. ExPASy Swiss-Prot
Match: PSB4_DROME (Proteasome subunit beta type-4 OS=Drosophila melanogaster GN=Prosbeta7 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.996e-36 Identity = 75/184 (40.76%), Postives = 121/184 (65.76%), Query Frame = 3 Query: 231 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYE--DGVKLLEKCMRVLLYRDRSAVNKLQI 773 TGTSV+ ++Y G+++AAD SYGS RY+++ER+ + K+ LLG SG+ +D Q + RN+D+ ++ D DD + PK L S++TRV+YNRR++ +PL+ +V+GGV N G YL V + G ++ED VATGF HLA P++R++ ++ + + +L+ CM VL YRD +++ + Sbjct: 56 TGTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLRGRSYEDYVVATGFARHLAVPLVREKKPKDRDFTAVEASELIRTCMEVLYYRDTRNISQYTV 239 The following BLAST results are available for this feature:
BLAST of DR403219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403219 ID=DR403219; Name=DR403219; organism=Citrus sinensis; type=EST; length=774bpback to top |