DR403182

Overview
NameDR403182
Unique NameDR403182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6073 contig Csv1_Contig6073:1..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403182 vs. ExPASy Swiss-Prot
Match: ARSA_METTH (Putative arsenical pump-driving ATPase OS=Methanobacterium thermoautotrophicum GN=MTH_1511 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.247e-11
Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  373 GRXGVGKTSCAASXAVKFANNGHPTLVVSTDPAHSLSDSFAQGLTGGQLVPVEGPDFPLFALEINPEKAREEFRNVTQKDGGTGVKDFMDGMGLGMLVEQVKVYP*LLASKLRMKFVKPGLD 738
            G+ GVGKT+ +A+ A+  A +G  TLV+STDPAHSLSDS  + +        E     L+A+EI+PE A EE++   Q+           GMGL ML +Q           + M  + PG+D
Sbjct:   21 GKGGVGKTTISAATALWMARSGKKTLVISTDPAHSLSDSLEREIGHTPTKITEN----LYAVEIDPEVAMEEYQAKLQEQAAMN-----PGMGLDMLQDQ-----------MDMASMSPGID 122          
The following BLAST results are available for this feature:
BLAST of DR403182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ARSA_METTH4.247e-1137.70Putative arsenical pump-driving ATPase OS=Methanob... [more]
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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244B09 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403182 ID=DR403182; Name=DR403182; organism=Citrus sinensis; type=EST; length=747bp
GGGGATCACAACGGAACTCCAGAAGCACTTTCTTTGTTTCTTTGTGTTGG
CAAATAACCAGAACCAGCAAGGCAAAACTTAGAAACATGACGACAGCTGC
GTGTTGTTTTCGCTCCACGTCTTTACCTTCTTCATTCTCAATTCACAAAA
AGCTTGCTGTCAAGAGAAACTCAAACGCAGTGTCATTCATGGGTTTGCTC
TCGTTCTCGCCCAAAACCAGCTCTTTCTCCACTGGCCTTATATCAATTTC
CCTCAAGCAGAGGCGTTCGAAGAACTCATTCCAAGTAAGAGCAGTGGTTG
CTCCTTCGGAAGCTGTATCTGGGTTTGATGAGATGGTGGCTGGGACCCAA
CGGAAATATTACATGTTAGGTGGGAAGGNGGGGAGTAGGCAAGACAAGTT
GTGCGGCTTCANNNGCTGTAAAATTTGCAAATAATGGGCACCCCACTTTA
GTGGTCTCAACTGATCCAGCACATTCCTTGAGTGATTCTTTCGCGCAGGG
TTTGACAGGCGGGCAACTAGTACCAGTTGAAGGGCCTGATTTTCCATTGT
TTGCTCTTGAGATAAATCCTGAGAAGGCTAGGGAAGAATTTCGCAACGTA
ACTCAAAAAGATGGTGGAACGGGGGTTAAGGATTTCATGGATGGCATGGG
TCTTGGTATGCTTGTAGAACAGGTAAAGGTTTATCCATAACTACTGGCAT
CAAAACTTAGGATGAAATTTGTCAAGCCTGGATTGGACTTGCATTTT
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