DR403174

Overview
NameDR403174
Unique NameDR403174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2583 contig Csv1_Contig2583:55..783. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403174 vs. ExPASy Swiss-Prot
Match: GUAD_BACSU (Guanine deaminase OS=Bacillus subtilis GN=guaD PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21
Identity = 52/102 (50.98%), Postives = 63/102 (61.76%), Query Frame = 1
Query:  181 DHE-FLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVREACKKLNKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAK 483
            +HE FL +AV  A +GV  G GGPFGA             N V    DPTAHAEVTA+R+ACK L   +L DC +Y SCEPCPMC GAI+ +R K + Y A+
Sbjct:    2 NHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAE 103          
BLAST of DR403174 vs. ExPASy Swiss-Prot
Match: TADA_AQUAE (tRNA-specific adenosine deaminase OS=Aquifex aeolicus GN=tadA PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.299e-14
Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 1
Query:  190 FLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVREACKKLNKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 480
            FL  A+ EA +  E G+  P GA            HN V +  DPTAHAE+ A++EAC++LN   L  CE+Y + EPC MC  A+ LSRI+++++ A
Sbjct:    6 FLKVALREAKRAFEKGEV-PVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRLNTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSA 101          
BLAST of DR403174 vs. ExPASy Swiss-Prot
Match: TADA_BACSU (tRNA-specific adenosine deaminase OS=Bacillus subtilis GN=tadA PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12
Identity = 37/101 (36.63%), Postives = 55/101 (54.46%), Query Frame = 1
Query:  178 RDHEFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVREACKKLNKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 480
            +D  ++ +A++EA K  E G+  P GA            HN+        AHAE+  + EACK L    L    +Y + EPCPMC GA+ LSR++++V+GA
Sbjct:    3 QDELYMKEAIKEAKKAEEKGEV-PIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVIDEACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGA 102          
BLAST of DR403174 vs. ExPASy Swiss-Prot
Match: Y246_BUCAP (Uncharacterized protein BUsg_246 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=BUsg_246 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.068e-11
Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 1
Query:  175 DRDHEFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVREACKKLNKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 480
            +RD  ++  A++ AY   E G+  P GA          +  N V+   D TAHAE+ A+REA + +    L +  +Y + +PC MC GAI  SRIKRLV+GA
Sbjct:    4 NRDSYWMKIALKYAYYAEENGEV-PIGAILVFQEKIIGTGWNSVISQNDSTAHAEIIALREAGRNIKNYRLVNTTLYVTLQPCMMCCGAIINSRIKRLVFGA 104          
BLAST of DR403174 vs. ExPASy Swiss-Prot
Match: Y255_BUCAI (Uncharacterized protein BU255 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=BU255 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 40/102 (39.22%), Postives = 56/102 (54.90%), Query Frame = 1
Query:  175 DRDHEFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVREACKKLNKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 480
            ++D  ++  A++ AY   E G+  P GA             N  +   DPTAHAE+ A+R A KK+    L +  +Y + +PC MC GAI  SRIKRLV+GA
Sbjct:    4 EKDKNWMKIALKYAYYAKEKGEI-PIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRGAGKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGA 104          
BLAST of DR403174 vs. ExPASy Swiss-Prot
Match: Y1872_ARATH (Uncharacterized protein At1g68720 OS=Arabidopsis thaliana GN=At1g68720 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11
Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query:  181 DHEFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVREACKKLNKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 480
            D  F+ +A+ EA K  +  +  P GA            +N+V +  D TAHAE+  +RE  K L    L+D  +Y + EPCPMC GAI  +R+  LV+GA
Sbjct: 1110 DEIFMREALVEAKKAADTWEV-PVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGSKALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGA 1208          
The following BLAST results are available for this feature:
BLAST of DR403174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GUAD_BACSU1.942e-2150.98Guanine deaminase OS=Bacillus subtilis GN=guaD PE=... [more]
TADA_AQUAE2.299e-1442.27tRNA-specific adenosine deaminase OS=Aquifex aeoli... [more]
TADA_BACSU3.671e-1236.63tRNA-specific adenosine deaminase OS=Bacillus subt... [more]
Y246_BUCAP1.068e-1139.22Uncharacterized protein BUsg_246 OS=Buchnera aphid... [more]
Y255_BUCAI1.822e-1139.22Uncharacterized protein BU255 OS=Buchnera aphidico... [more]
Y1872_ARATH5.301e-1138.00Uncharacterized protein At1g68720 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244A18 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244A18 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403174 ID=DR403174; Name=DR403174; organism=Citrus sinensis; type=EST; length=730bp
GGGGATTCTGATTTGTTTTCACTTCTGTTTTGGAGTCACAACTCATAACA
TCGACGACATTCATTCACTTCATCAACAATAACAACAACATGGAAGGAAG
CTAATGTGGTGGAAACTAAGGATGGANNNATTTCTGTGGCTTCTGCATTT
GCTGCTCATCAGGAAGCTGTACAGGATAGAGACCATGAGTTCCTAAGTAA
AGCTGTTGAAGAAGCATATAAAGGAGTTGAATGTGGAGATGGGGGTCCTT
TTGGTGCTGTTGTCGTACGTAGTGATGAAGTTGTTGTAAGTTGTCATAAC
ATGGTTTTGAAGCACACTGATCCTACTGCCCATGCTGAGGTGACGGCGGT
GAGAGAGGCTTGCAAAAAGCTCAATAAGATTGAGCTTTCAGACTGCGAAA
TATACGCCTCCTGTGAGCCTTGCCCCATGTGCTTTGGGGCTATCCACCTT
TCACGAATCAAGAGGTTGGTTTATGGAGCCAAGGCTGAAGCAGCCATTGC
CATAGGATTTGATGATTTCATTGCAGATGCAATAAGGGGAACTGGCTTCT
ATCAGAAGGCTCAGCTGGAGATCAAAAGAGCTGATGGCAATGGGGCAGCC
ATAGCAGAACAGGTCTTTGAGAAGACAAAGGAAAAGTTCAGGATGTATTG
ATTTTTCATGTTACCCTTTTGGTTGATTGTAACTAACATTCATCCATTCT
GAACATTGGCTTCATTTCTTTTTAATGCAA
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