FC922046

Overview
NameFC922046
Unique NameFC922046
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC922046_ssr321 microsatellite FC922046_ssr321:321..330. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:1..366. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.542e-40
Identity = 80/94 (85.11%), Postives = 87/94 (92.55%), Query Frame = -3
Query:    2 MAITITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 283
            MAITI +V+ARQIFDSRGNPTVE D+   DGH+ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN+IIGPAL GKDPTEQTA+DN+M
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADIKLSDGHLARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVENVNSIIGPALIGKDPTEQTALDNFM 94          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO1_HEVBR (Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.105e-38
Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = -3
Query:    2 MAITITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 283
            MAITI +V+ARQIFDSRGNPTVE DV   DG++ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+Q  IDN+M
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADVKLSDGYLARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVENVNIIIGPALVGKDPTDQVGIDNFM 94          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.200e-38
Identity = 77/94 (81.91%), Postives = 83/94 (88.30%), Query Frame = -3
Query:    2 MAITITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 283
            MAITI +V+ARQIFDSRGNPTVE DV   DG++ARAAVP GASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+Q  IDN+M
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADVKLSDGYLARAAVPRGASTGIYEALELRDGGSDYLGKGVSKAVENVNIIIGPALVGKDPTDQVGIDNFM 94          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO1_MAIZE (Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.485e-38
Identity = 79/94 (84.04%), Postives = 82/94 (87.23%), Query Frame = -3
Query:    2 MAITITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 283
            MA+TIT VKARQIFDSRGNPTVEVDV   DG  AR AVPSGASTGIYEALELRDGGSDYLGKGV KAVSNVN IIGPA+ GKDPTEQ  IDN+M
Sbjct:    1 MAVTITWVKARQIFDSRGNPTVEVDVGLSDGSYARGAVPSGASTGIYEALELRDGGSDYLGKGVLKAVSNVNNIIGPAIVGKDPTEQVEIDNFM 94          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_ARATH (Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.644e-37
Identity = 77/91 (84.62%), Postives = 81/91 (89.01%), Query Frame = -3
Query:    2 TITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 274
            TIT VKARQIFDSRGNPTVEVD+ T +G    AAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+QTAIDN+M
Sbjct:    3 TITVVKARQIFDSRGNPTVEVDIHTSNGIKVTAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVGNVNNIIGPALIGKDPTQQTAIDNFM 93          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.644e-37
Identity = 77/94 (81.91%), Postives = 83/94 (88.30%), Query Frame = -3
Query:    2 MAITITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 283
            MA TI +VKARQIFDSRGNPTVEVDV   DG  ARAAVPSGASTG+YEALELRDGGS YLGKGVSKAV+NVN++IGPAL GKDPT QT IDN+M
Sbjct:    1 MAATIQSVKARQIFDSRGNPTVEVDVFCSDGTFARAAVPSGASTGVYEALELRDGGSYYLGKGVSKAVNNVNSVIGPALIGKDPTAQTEIDNFM 94          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_SOLLC (Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 6.065e-37
Identity = 75/91 (82.42%), Postives = 83/91 (91.21%), Query Frame = -3
Query:    2 TITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 274
            TI ++KARQIFDSRGNPTVEVDV   +G  ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV+NVN+IIGPAL GKDPT+QT +DN+M
Sbjct:    3 TIKSIKARQIFDSRGNPTVEVDVHISNGVFARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVNNVNSIIGPALVGKDPTDQTGLDNFM 93          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 7.921e-37
Identity = 75/94 (79.79%), Postives = 81/94 (86.17%), Query Frame = -3
Query:    2 MAITITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 283
            MA TI +VKARQIFDSRGNPTVEVDV   DG  ARAAVPSGASTG+YEALELRDGGSDYLGKGVSKAV NVN++I PAL GKDPT Q  +DN+M
Sbjct:    1 MAATIVSVKARQIFDSRGNPTVEVDVCCSDGTFARAAVPSGASTGVYEALELRDGGSDYLGKGVSKAVDNVNSVIAPALIGKDPTSQAELDNFM 94          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_MESCR (Enolase OS=Mesembryanthemum crystallinum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 6.705e-36
Identity = 72/92 (78.26%), Postives = 79/92 (85.87%), Query Frame = -3
Query:    2 ITITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 277
            +TI  VKARQI+DSRGNPTVE D+   DG  ARAAVPSGASTG+YEALELRDGG DY+GKGV KAV NVN IIGPAL GKDPT+QTAIDN+M
Sbjct:    2 VTIKCVKARQIYDSRGNPTVEADIHLDDGTYARAAVPSGASTGVYEALELRDGGKDYMGKGVYKAVKNVNEIIGPALVGKDPTQQTAIDNFM 93          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_ALNGL (Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.682e-35
Identity = 73/87 (83.91%), Postives = 78/87 (89.66%), Query Frame = -3
Query:   11 ITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAID 271
            IT +KARQIFDSRGNPTVE +VTT +G V+RAAVPSGASTG+YEALELRDGGSDYLGKGV KAV NVN IIGPAL GKD TEQTAID
Sbjct:    4 ITHIKARQIFDSRGNPTVEAEVTTANGVVSRAAVPSGASTGVYEALELRDGGSDYLGKGVLKAVDNVNKIIGPALIGKDATEQTAID 90          
The following BLAST results are available for this feature:
BLAST of FC922046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_RICCO1.542e-4085.11Enolase OS=Ricinus communis PE=2 SV=1[more]
ENO1_HEVBR1.105e-3882.98Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1[more]
ENO2_HEVBR4.200e-3881.91Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1[more]
ENO1_MAIZE5.485e-3884.04Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1[more]
ENO_ARATH4.644e-3784.62Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1[more]
ENO2_MAIZE4.644e-3781.91Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1[more]
ENO_SOLLC6.065e-3782.42Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1[more]
ENO_ORYSJ7.921e-3779.79Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE... [more]
ENO_MESCR6.705e-3678.26Enolase OS=Mesembryanthemum crystallinum GN=PGH1 P... [more]
ENO_ALNGL9.682e-3583.91Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC06056H09T7 RindPdigS Citrus sinensis cDNA clone C06056H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922046 ID=FC922046; Name=FC922046; organism=Citrus sinensis; type=EST; length=366bp
CCATATAGTTGTCAATAGCAGTCTGCTCAGTTGGGTCCTTGCCAGCGAGT
GCAGGGCCAATGATGGCGTTGACATTGCTAACAGCTTTCGATACACCCTT
GCCTAGGTAATCAGAGCCTCCGTCTCTTAGTTCAAGCGCCTCATAAATTC
CGGTGGATGCACCGCTTGGAACAGCAGCTCTAGCCACGTGGCCATCTGGT
GTTGTCACGTCGACCTCCACCGTTGGATTTCCACGGCTGTCAAAGATCTG
CCTGGCTTTGACGGCAGTGATGGTTATTGCCATTTTCTGAAAACTGGAAA
ACCGAAGAAAGATCTAGAACGAGAGAGAGAGTCTGTGAGTGCGAGAAGAG
TCTTGTGATTCCCCGC
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