FC922042

Overview
NameFC922042
Unique NameFC922042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length372
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13534 contig Csv1_Contig13534:148..519. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC922042 vs. ExPASy Swiss-Prot
Match: WAX2_ARATH (Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 3 
Query:  162 MDAPLAAWPWDNLGMFKYVLYGPLVGKALYSWVY-EDKRIEYWCLHILFISVLRGLIHILWNSFSNMLFL 368
            M A L+AWPW+N G  KY+LY PL  + +YSWVY ED     WC+HIL I  L+ L+H LW+ F+NMLF+
Sbjct:    1 MVAFLSAWPWENFGNLKYLLYAPLAAQVVYSWVYEEDISKVLWCIHILIICGLKALVHELWSVFNNMLFV 70
The following BLAST results are available for this feature:
BLAST of FC922042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WAX2_ARATH9.036e-1754.29Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionC06056H05T7 RindPdigS Citrus sinensis cDNA clone C06056H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922042 ID=FC922042; Name=FC922042; organism=Citrus sinensis; type=EST; length=372bp
CTAAGATACTATAAATAGTTTTTCTTGAAGAAGAGAAGTTGATCAAGACC
AACTCTGCTTGATAATTCTTGATTAATTGAACTTCTCTTTCTTCAGGAAT
TTACAATATTATACACTCGCATTCAAAGGAATTATTTAAAAGAAAGATTT
AGAGAACTAGGATGGATGCTCCTTTGGCAGCTTGGCCATGGGATAACCTA
GGCATGTTCAAGTATGTGCTGTATGGACCACTCGTCGGAAAAGCTTTATA
CTCATGGGTTTATGAAGATAAACGAATTGAATATTGGTGCCTCCATATTC
TGTTCATCTCCGTTCTTAGAGGACTAATTCATATCTTATGGAACTCTTTC
AGTAACATGCTTTTCCTTAATC
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