FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:521..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.224e-59
Identity = 116/143 (81.12%), Postives = 131/143 (91.61%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LGV+TVPVL+GPVSYLLLSK AKGV K+F LLSLLPKIL IYKEVI+ELKAAGA+ IQ DEP+LVMDL+  KLQAF+ AYAELES LSGLNVLVETYFAD+PAEA++TLTSLKGVTA+GFDLVRGTKTL+L+K+GFP GK
Sbjct:  144 AKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTLDLVKAGFPEGK 286          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 2.726e-59
Identity = 116/143 (81.12%), Postives = 130/143 (90.91%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LGV+TVPVL+GPVSYLLLSK AKGV K+F LLSLLPKIL IYKEV++ELK AGAS IQFDEPLLVMDL+SHKLQAFS AYA+LES LSGLNV+VETYFADV AEA++TL SLKGVT YGFDLVRGTKTL+L+K+ FP+GK
Sbjct:  144 AKALGVDTVPVLVGPVSYLLLSKQAKGVDKSFDLLSLLPKILPIYKEVVAELKEAGASWIQFDEPLLVMDLESHKLQAFSAAYADLESTLSGLNVVVETYFADVTAEAYKTLISLKGVTGYGFDLVRGTKTLDLVKAEFPSGK 286          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.552e-57
Identity = 109/143 (76.22%), Postives = 129/143 (90.21%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LGV+TVPVL+GPV++LLLSKPAKGV KTF LLSLL KIL +YKEVI ELKAAGAS IQFDEP LV+DL+SH+L+AF++AY+ELES LSGLNV+VETYFAD+PAE ++ LT+LKGVT +GFDLVRG KTL+LIK GFP+GK
Sbjct:  144 AKELGVDTVPVLVGPVTFLLLSKPAKGVEKTFPLLSLLDKILPVYKEVIGELKAAGASWIQFDEPTLVLDLESHQLEAFTKAYSELESTLSGLNVIVETYFADIPAETYKILTALKGVTGFGFDLVRGAKTLDLIKGGFPSGK 286          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 7.424e-57
Identity = 109/143 (76.22%), Postives = 128/143 (89.51%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LGV+TVPVL+GPVSYL+LSKPAKGV KTF LLSLL KIL IYKEVI+ELKAAGAS IQFDEP LV+DL+SH+L AF++AYAELES LSGL+ L+ETYFADVPA A++TLTSL G++ +GFDLVRG +T+ELIK GFP+GK
Sbjct:  143 AKALGVDTVPVLVGPVSYLILSKPAKGVEKTFPLLSLLDKILPIYKEVIAELKAAGASWIQFDEPTLVLDLESHQLDAFTKAYAELESSLSGLSTLIETYFADVPAPAYKTLTSLSGISGFGFDLVRGAQTIELIKGGFPSGK 285          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_STRPI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.120e-20
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LG+ T PVL+GP ++L LS   +GV         +  ++  Y+EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL++TYF DV  + +  L +L  V A GFD V G KTLEL+K GFPA K
Sbjct:  147 AKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSLVAAYQEVFAKLAELGATCIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQTYFGDV-RDVYADLVNLP-VDAIGFDFVEGKKTLELVKGGFPADK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_STRGC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metE PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.462e-20
Identity = 61/143 (42.66%), Postives = 81/143 (56.64%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LG+ T PV++GP + L +S    GVA        +  + T Y+EV ++L   GA  IQ DEP LV DL + +   F + Y +L +   GL VL++TYF DV  + +  L  L  V A G D V G KTLEL+K GFPA K
Sbjct:  147 AKELGLVTRPVVVGPFTLLQVSDFEDGVAPA----DFVDALATAYQEVFAKLAELGAKRIQLDEPSLVKDLSAEEKALFLDLYKKLLADKKGLEVLIQTYFGDV-RDIYSDLVQLP-VDAIGLDFVEGKKTLELVKGGFPADK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_STRTD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=metE PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.258e-20
Identity = 58/143 (40.56%), Postives = 82/143 (57.34%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LG++T PV++GP ++L LS    GV         +   +  Y++V ++L   GA+ IQ DEP LV DL + +   F   Y ++ +   GL VL++TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA K
Sbjct:  147 AKDLGLDTRPVVVGPFTFLQLSDFEDGVKAE----DFVDSFIAAYQDVFAKLAELGATRIQLDEPALVKDLTADEKALFLNLYNKILADKKGLEVLIQTYFGDV-RDVYNDLVNLP-VDAIGLDFVEGKKTLELVKGGFPADK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_STRSV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus sanguinis (strain SK36) GN=metE PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.258e-20
Identity = 61/143 (42.66%), Postives = 81/143 (56.64%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LG+ T PV++GP + L +S    GVA        +  ++  Y+EV ++L   GA  IQ DEP LV DL + +   F + Y +L +   GL VLV+TYF DV  + +  L  L  V A G D V G KTLEL+K GFPA K
Sbjct:  147 AKELGLVTRPVVVGPFTLLQVSDFEDGVAPA----DFVDALVVAYQEVFAKLAELGAERIQLDEPSLVKDLSAEEKALFLDLYKKLLADKKGLEVLVQTYFGDV-RDIYADLVQLP-VDAIGLDFVEGKKTLELVKGGFPADK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_STRPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.557e-20
Identity = 60/143 (41.96%), Postives = 82/143 (57.34%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LG+ T PVL+GP ++L LS   +GV         +  ++  Y+EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL++TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA K
Sbjct:  147 AKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSLVAAYQEVFAKLAELGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQTYFGDV-RDVYADLVNLP-VDAIGLDFVEGKKTLELVKGGFPADK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_STRP4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.557e-20
Identity = 60/143 (41.96%), Postives = 82/143 (57.34%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LG+ T PVL+GP ++L LS   +GV         +  ++  Y+EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL++TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA K
Sbjct:  147 AKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSLVAAYQEVFAKLAELGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQTYFGDV-RDVYADLVNLP-VDAIGLDFVEGKKTLELVKGGFPADK 283          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_ARATH1.224e-5981.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESCR2.726e-5981.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO2.552e-5776.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SOLSC7.424e-5776.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPI1.120e-2042.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGC1.462e-2042.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRTD3.258e-2040.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSV3.258e-2042.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPN5.557e-2041.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP45.557e-2041.965-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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