FC922030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC922030 vs. ExPASy Swiss-Prot
Match: CTNS_ARATH (Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.584e-35 Identity = 69/98 (70.41%), Postives = 83/98 (84.69%), Query Frame = 2 Query: 2 GRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 G +MIPVAANDVAFS+HAV++T +TLFQI IYERG QKVS++++ IV VVW AA+CFF+ALP HSWLWLI+ FN+IQV MT +KYIPQA MNF RK Sbjct: 81 GDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRK 178
BLAST of FC922030 vs. ExPASy Swiss-Prot
Match: CTNS_DICDI (Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.553e-19 Identity = 40/94 (42.55%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 17 IPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 IPV +D+AF++H +LT IT+ Q IY+RG QK SK+ + I +++W++ V + N +WLW+IN+++ +++ +T IKYIPQA +NF+ K Sbjct: 79 IPVQQSDIAFAIHGFVLTAITIIQCFIYDRGNQKNSKLGIGIATLIWVSLIVMTILGFSNVFTWLWVINYYSYVKLFITFIKYIPQAYLNFKNK 172
BLAST of FC922030 vs. ExPASy Swiss-Prot
Match: CTNS_MOUSE (Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.067e-15 Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 20 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 PV +ND FS+HAV LT+I + Q +YERG Q+VS S+ + + WL V VA +WL + F+ I++I+TLIKY PQA MNF K Sbjct: 200 PVDSNDAFFSLHAVALTLIVILQCCLYERGNQRVSWPSIGFLVLAWLFVLVTMIVAAVGITTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYK 292
BLAST of FC922030 vs. ExPASy Swiss-Prot
Match: CTNS_HUMAN (Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.642e-15 Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 20 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 PV +NDV FS+HAV+LT+I + Q +YERG Q+VS ++ + + WL A V VA +WL + F+ I++ +TL+KY PQA MNF K Sbjct: 200 PVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYK 292
BLAST of FC922030 vs. ExPASy Swiss-Prot
Match: CTNS_BOVIN (Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.474e-14 Identity = 38/93 (40.86%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 20 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFV-ALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 PV +NDV FS+HAV LT++ + Q +YERG Q+VS ++++ + + WL + + A+ +WL + F+ I++ +TL+KY PQA MNF K Sbjct: 200 PVDSNDVFFSLHAVALTLVVIVQCLLYERGSQRVSWLAISFLVLSWLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTLVKYFPQAYMNFHYK 292
BLAST of FC922030 vs. ExPASy Swiss-Prot
Match: CTNS_DROME (Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.380e-12 Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 20 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPNHS---WLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 PV NDV FS+HA+ T IT+ Q Y+R Q+VS I+ I+++ A V L S WL + + + +++ +T+IKY+PQA+MN+RRK Sbjct: 205 PVMLNDVVFSLHAMFATCITILQCFFYQRAQQRVSFIAYGILAI--FAVVVVVSAGLAGGSVIHWLDFLYYCSYVKLTITIIKYVPQALMNYRRK 297 The following BLAST results are available for this feature:
BLAST of FC922030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC922030 ID=FC922030; Name=FC922030; organism=Citrus sinensis; type=EST; length=296bpback to top |