EY701061

Overview
NameEY701061
Unique NameEY701061
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY701061 vs. ExPASy Swiss-Prot
Match: RS23_EUPES (40S ribosomal protein S23 OS=Euphorbia esula GN=RPS23 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.193e-59
Identity = 113/140 (80.71%), Postives = 116/140 (82.86%), Query Frame = 2
Query:   74 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARSSLIENGKKIAAFVPXDGCLNYIEENDEVLIAGIGRKGHAVRDIPXXXXXXXXXXXXXXXXXFKEKKERP 493
            MGKT GMGA RKLK+HRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCAR  LI+NGKKIAAFVP DGCLNYIEENDEVLIAG GRKGHAV DIP                 FKEKKE+P
Sbjct:    1 MGKTHGMGAARKLKSHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 140          
BLAST of EY701061 vs. ExPASy Swiss-Prot
Match: RS23_FRAAN (40S ribosomal protein S23 OS=Fragaria ananassa GN=RPS23 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 5.446e-59
Identity = 113/140 (80.71%), Postives = 115/140 (82.14%), Query Frame = 2
Query:   74 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARSSLIENGKKIAAFVPXDGCLNYIEENDEVLIAGIGRKGHAVRDIPXXXXXXXXXXXXXXXXXFKEKKERP 493
            MGKTRGMGA RKLK HRR QRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCAR  LI+NGKKIAAFVP DGCLNYIEENDEVLIAG GRKGHAV DIP                 FKEKKE+P
Sbjct:    1 MGKTRGMGAARKLKNHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 140          
BLAST of EY701061 vs. ExPASy Swiss-Prot
Match: RS232_ARATH (40S ribosomal protein S23-2 OS=Arabidopsis thaliana GN=RPS23B PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 5.097e-57
Identity = 111/140 (79.29%), Postives = 113/140 (80.71%), Query Frame = 2
Query:   74 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARSSLIENGKKIAAFVPXDGCLNYIEENDEVLIAGIGRKGHAVRDIPXXXXXXXXXXXXXXXXXFKEKKERP 493
            MGKTRGMGAGRKLK  R  QRWADK YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCAR  LI+NGKKIAAFVP DGCLNYIEENDEVLIAG GRKGHAV DIP                 FKEKKE+P
Sbjct:    1 MGKTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 140          
BLAST of EY701061 vs. ExPASy Swiss-Prot
Match: RS231_ARATH (40S ribosomal protein S23-1 OS=Arabidopsis thaliana GN=RPS23A PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 6.231e-55
Identity = 109/140 (77.86%), Postives = 112/140 (80.00%), Query Frame = 2
Query:   74 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARSSLIENGKKIAAFVPXDGCLNYIEENDEVLIAGIGRKGHAVRDIPXXXXXXXXXXXXXXXXXFKEKKERP 493
            MGKTRGMGAGRKLK  R TQRWADK YKKS+ GNEWKKPFA SSHAKGIVLEKIGIEAKQPNSAIRKCAR  LI+NGKKIAAFVP DGCLNYIEENDEVLIAG GRKGHAV DIP                 FKEKKE+P
Sbjct:    1 MGKTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKKPFACSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 140          
BLAST of EY701061 vs. ExPASy Swiss-Prot
Match: RS23_LUMRU (40S ribosomal protein S23 OS=Lumbricus rubellus GN=RPS23 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.995e-49
Identity = 95/141 (67.38%), Postives = 104/141 (73.76%), Query Frame = 2
Query:   74 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARSSLIENGKKIAAFVPXDGCLNYIEENDEVLIAGIGRKGHAVRDIPXXXXXXXXXXXXXXXXXFKEKKERP 493
            MGK RG+   RKLK HRR QRW DK YKKSHLG  WK  PF G+SHAKGIVLEK+G+EAKQPNSAIRKC R  LI+NGKKI AFVP DGCLN+IEENDEVL+AG GRKGHAV DIP                 +K+KKERP
Sbjct:    1 MGKPRGLRTARKLKNHRREQRWHDKDYKKSHLGTRWKSNPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVASVSLLALYKQKKERP 141          
BLAST of EY701061 vs. ExPASy Swiss-Prot
Match: RS23_DERVA (40S ribosomal protein S23 OS=Dermacentor variabilis GN=RpS23 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.138e-48
Identity = 94/141 (66.67%), Postives = 104/141 (73.76%), Query Frame = 2
Query:   74 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARSSLIENGKKIAAFVPXDGCLNYIEENDEVLIAGIGRKGHAVRDIPXXXXXXXXXXXXXXXXXFKEKKERP 493
            MGK RG+   RK ++HRR QRW DK YKK+HLG  WK  PF G+SHAKGIVLEK+G+EAKQPNSAIRKC R  LI+NGKKI AFVP DGCLNYIEENDEVL+AG GRKGHAV DIP                 +KEKKERP
Sbjct:    1 MGKPRGLRTARKHRSHRRDQRWHDKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 141          
BLAST of EY701061 vs. ExPASy Swiss-Prot
Match: RS23_BRUMA (40S ribosomal protein S23 OS=Brugia malayi GN=rps-23 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.325e-48
Identity = 94/141 (66.67%), Postives = 104/141 (73.76%), Query Frame = 2
Query:   74 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARSSLIENGKKIAAFVPXDGCLNYIEENDEVLIAGIGRKGHAVRDIPXXXXXXXXXXXXXXXXXFKEKKERP 493
            MGK +G+ A RKLKTHR+ QRW DK YKK+HLG  WK  PF  +SHAKGIVLEK+G+EAKQPNSAIRKC R  LI+NGKKI AFVP DGCLN+IEENDEVL+AG GRKGHAV DIP                 FK KKERP
Sbjct:    1 MGKPKGIRAARKLKTHRQAQRWNDKGYKKAHLGTRWKANPFGTASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKIVKVANTSLIALFKGKKERP 141          
BLAST of EY701061 vs. ExPASy Swiss-Prot
Match: RS23_SPOFR (40S ribosomal protein S23 OS=Spodoptera frugiperda GN=RpS23 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.635e-48
Identity = 92/141 (65.25%), Postives = 103/141 (73.05%), Query Frame = 2
Query:   74 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARSSLIENGKKIAAFVPXDGCLNYIEENDEVLIAGIGRKGHAVRDIPXXXXXXXXXXXXXXXXXFKEKKERP 493
            MGK RG+   RK   HRR QRWADK YKK+H+G  WK  PF G+SHAKGIVLEK+G+EAKQPNSAIRKC R  LI+NGKK+ AFVP DGCLN+IEENDEVL+AG GRKGHAV DIP                 +KEKKERP
Sbjct:    1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 141          
BLAST of EY701061 vs. ExPASy Swiss-Prot
Match: RS23_PAPDA (40S ribosomal protein S23 OS=Papilio dardanus GN=RpS23 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.635e-48
Identity = 92/141 (65.25%), Postives = 103/141 (73.05%), Query Frame = 2
Query:   74 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARSSLIENGKKIAAFVPXDGCLNYIEENDEVLIAGIGRKGHAVRDIPXXXXXXXXXXXXXXXXXFKEKKERP 493
            MGK RG+   RK   HRR QRWADK YKK+H+G  WK  PF G+SHAKGIVLEK+G+EAKQPNSAIRKC R  LI+NGKK+ AFVP DGCLN+IEENDEVL+AG GRKGHAV DIP                 +KEKKERP
Sbjct:    1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 141          
BLAST of EY701061 vs. ExPASy Swiss-Prot
Match: RS23_DROME (40S ribosomal protein S23 OS=Drosophila melanogaster GN=RpS23 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.258e-47
Identity = 94/141 (66.67%), Postives = 102/141 (72.34%), Query Frame = 2
Query:   74 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARSSLIENGKKIAAFVPXDGCLNYIEENDEVLIAGIGRKGHAVRDIPXXXXXXXXXXXXXXXXXFKEKKERP 493
            MGK RG+   RK   HRR QRWADK YKK+HLG  WK  PF G+SHAKGIVLEK+G+EAKQPNSAIRKC R  LI+NGKKI AFVP DG LNYIEENDEVL+AG GRKGHAV DIP                 +KEKKERP
Sbjct:    1 MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 141          
The following BLAST results are available for this feature:
BLAST of EY701061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
RS23_EUPES3.193e-5980.7140S ribosomal protein S23 OS=Euphorbia esula GN=RP... [more]
RS23_FRAAN5.446e-5980.7140S ribosomal protein S23 OS=Fragaria ananassa GN=... [more]
RS232_ARATH5.097e-5779.2940S ribosomal protein S23-2 OS=Arabidopsis thalian... [more]
RS231_ARATH6.231e-5577.8640S ribosomal protein S23-1 OS=Arabidopsis thalian... [more]
RS23_LUMRU2.995e-4967.3840S ribosomal protein S23 OS=Lumbricus rubellus GN... [more]
RS23_DERVA1.138e-4866.6740S ribosomal protein S23 OS=Dermacentor variabili... [more]
RS23_BRUMA4.325e-4866.6740S ribosomal protein S23 OS=Brugia malayi GN=rps-... [more]
RS23_SPOFR9.635e-4865.2540S ribosomal protein S23 OS=Spodoptera frugiperda... [more]
RS23_PAPDA9.635e-4865.2540S ribosomal protein S23 OS=Papilio dardanus GN=R... [more]
RS23_DROME1.258e-4766.6740S ribosomal protein S23 OS=Drosophila melanogast... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-102-E11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY701061 ID=EY701061; Name=EY701061; organism=Citrus sinensis; type=EST; length=880bp
CACGCGTCCGTTCTTCTCTTCGCCTTAACTTCTACACAGCCTCGTAGCAG
TCGAGTAACTACAATCAGGAATCATGGGGAAGACACGTGGTATGGGAGCT
GGTCGCAAGCTGAAGACTCACCGTAGGACTCAAAGGTGGGCTGATAAGTC
ATACAAAAAGTCTCACCTTGGCAATGAGTGGAAGAAGCCATTTGCTGGTT
CTTCCCATGCTAAAGGAATTGTTCTTGAGAAGATAGGTATTGAAGCTAAG
CAGCCTAACTCTGCTATTCGTAAGTGTGCTAGAAGTTCACTTATCGAAAA
CGGAAAGAAGATTGCCGCTTTTGTTCCANATGATGGTTGCTTGAACTATA
TTGAAGAAAATGATGAGGTGTTGATTGCTGGGATTGGACGTAAAGGACAT
GCGGTCCGTGATATTCCTGGTGTCCAGGTCAAGGTTGTGAAGGTCTCTGG
TGTCTCTCTCTTGGGTCTCTTCAAGGAGAAAAAAGAGAGGCCGAGTCTTA
AGAGAAGAGACCTGTCTAACCTGGCAACTCTTTGATAGGTTCTTTTGGAT
ATCCCCCGTGGTCGGGTCCCCGGTTGTGAAGGGGCCTTGGTGGTCCCCCC
TGGGGCCCCTGCGAACACCAAAAGGGAAAACCCACGTTCTTAGGGGAAGA
GACCTGTCTTACCCTGCCACCTCTTTGATAGTTATTTTAACGAATTCGGA
CTTGTCGCTTCTTGTTATCGCAGTGGATTTAATGAACAATTGTTTATCCA
GTGGTCTACTCCAGTGTATTGGGTGGGGTACAAGTTTGACCCTGGAATTG
ATGTTGTGGTCTCCCGTTGGCGGGAGCGCCCGCTGCCCCGCCCGCGCCGG
GGGGCCCGCCAGACCCTCCCCCTCCCTTCC
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