CX046767

Overview
NameCX046767
Unique NameCX046767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2433 contig Csv1_Contig2433:277..1143. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.669e-76
Identity = 139/200 (69.50%), Postives = 162/200 (81.00%), Query Frame = -1
Query:  272 VDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDD--LGPNCPSLPARMVQPTNGKLVWFLDKPAASKLESVQFCE 865
            VDWAKWY+FWADERVVAKNH DSNYKLAK+ LLSKV + P H+ SIND++SAEEA  EYEF IRQ+V++R V  SD SD P+FDLILLGMGSDGHVASLFPNH  L+VK+ WV+F+TDS KPPPERITFTLPVINSA+      TGESKA A+HLAIDD  L  +  SLPAR+V P+NG L+WF+DK A SKL+  +F E
Sbjct:   69 VDWAKWYVFWADERVVAKNHDDSNYKLAKDNLLSKVNVFPRHICSINDTVSAEEAATEYEFAIRQMVRSRTVAASDNSDSPRFDLILLGMGSDGHVASLFPNHPALEVKDDWVTFLTDSHKPPPERITFTLPVINSAANVVVVATGESKANAIHLAIDDLPLPDSSLSLPARLVHPSNGNLIWFMDKQAGSKLDRFKFSE 268          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.821e-75
Identity = 136/197 (69.04%), Postives = 163/197 (82.74%), Query Frame = -1
Query:  287 TVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDL--GPNCP-SLPARMVQPTNGKLVWFLDKPAASKLES 868
            T+DW+KWYIFW+DER VAKNHA+SNY++ KEG LSKVPI+  HV+SIND+ + E+A  +YEF IRQLVK R + VS+ +DCPKFDLILL MGSDGHVASLFPNH  L++K+ W+++ITDSP+PPPERITFTLPVINSAS      TG+ K+EAVHLAI D   GP  P SLPARMVQPT+GKLVWFLDK AAS L++
Sbjct:   72 TLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSLDA 268          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSI (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica GN=OsI_025867 PE=3 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.821e-75
Identity = 136/197 (69.04%), Postives = 163/197 (82.74%), Query Frame = -1
Query:  287 TVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDL--GPNCP-SLPARMVQPTNGKLVWFLDKPAASKLES 868
            T+DW+KWYIFW+DER VAKNHA+SNY++ KEG LSKVPI+  HV+SIND+ + E+A  +YEF IRQLVK R + VS+ +DCPKFDLILL MGSDGHVASLFPNH  L++K+ W+++ITDSP+PPPERITFTLPVINSAS      TG+ K+EAVHLAI D   GP  P SLPARMVQPT+GKLVWFLDK AAS L++
Sbjct:   72 TLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSLDA 268          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSJ (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica GN=Os03g0416500 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 9.992e-74
Identity = 135/196 (68.88%), Postives = 159/196 (81.12%), Query Frame = -1
Query:  287 TVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDD--LGPNCPSLPARMVQPTNGKLVWFLDKPAASKLES 868
            T+DW+KWYIFWADER VAKNH DS YK  KE  LSKVPI+  HV+SIND+++ E+A  +YEF IRQLVK R V VS+ +DCPKFDLILL +GSDGHVASLFPNH  L++K+ WV++ITDSP PPPERITFTLPVINSAS      TGE KA+AV+ AI D   GP+ PS+PARMVQPT+GKLVWFLDK +AS LE+
Sbjct:   89 TLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGTEGPDAPSIPARMVQPTDGKLVWFLDKASASFLEA 284          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSI (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica GN=OsI_011697 PE=3 SV=2)

HSP 1 Score: 276.944 bits (707), Expect = 9.992e-74
Identity = 135/196 (68.88%), Postives = 159/196 (81.12%), Query Frame = -1
Query:  287 TVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDD--LGPNCPSLPARMVQPTNGKLVWFLDKPAASKLES 868
            T+DW+KWYIFWADER VAKNH DS YK  KE  LSKVPI+  HV+SIND+++ E+A  +YEF IRQLVK R V VS+ +DCPKFDLILL +GSDGHVASLFPNH  L++K+ WV++ITDSP PPPERITFTLPVINSAS      TGE KA+AV+ AI D   GP+ PS+PARMVQPT+GKLVWFLDK +AS LE+
Sbjct:   89 TLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGAEGPDAPSIPARMVQPTDGKLVWFLDKASASFLEA 284          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.686e-60
Identity = 112/194 (57.73%), Postives = 140/194 (72.16%), Query Frame = -1
Query:  284 VDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKLESV 865
            V+W+KW++FW DERVV K+HADSNYKLA +GLLSKVPI  S +++IND+LSAE A DEYE  ++QLV   +V +S+++  PK DL+LLGMG DGHVASLFP H V++   +WVS+I DSPKPPPERITFT P++NS++     VTG  KA AVH A  D   +   LP  MV    G L WF DKPA S L S+
Sbjct:  134 VEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSMLSSI 327          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 3.686e-60
Identity = 112/194 (57.73%), Postives = 140/194 (72.16%), Query Frame = -1
Query:  284 VDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKLESV 865
            V+W+KW++FW DERVV K+HADSNYKLA +GLLSKVPI  S +++IND+LSAE A DEYE  ++QLV   +V +S+++  PK DL+LLGMG DGHVASLFP H V++   +WVS+I DSPKPPPERITFT P++NS++     VTG  KA AVH A  D   +   LP  MV    G L WF DKPA S L S+
Sbjct:  134 VEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSMLSSI 327          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.893e-56
Identity = 104/194 (53.61%), Postives = 138/194 (71.13%), Query Frame = -1
Query:  287 TVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKLES 868
            +VDW+KW++FW DERVV K+H DSNYKLA +G LSKVPI    V++IND+LSAE A D+YE  ++QLVK  ++ +S  +  P+FD++LLGMG DGH+ASLFP H +++   +WV++I DSPKPPPERITFT PVINS++     VTG  KA AV  A+ D   +   LP  M    +G+  WF DKPA S L++
Sbjct:  130 SVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSMLQN 323          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.893e-56
Identity = 104/194 (53.61%), Postives = 138/194 (71.13%), Query Frame = -1
Query:  287 TVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKLES 868
            +VDW+KW++FW DERVV K+H DSNYKLA +G LSKVPI    V++IND+LSAE A D+YE  ++QLVK  ++ +S  +  P+FD++LLGMG DGH+ASLFP H +++   +WV++I DSPKPPPERITFT PVINS++     VTG  KA AV  A+ D   +   LP  M    +G+  WF DKPA S L++
Sbjct:  130 SVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSMLQN 323          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.733e-54
Identity = 109/192 (56.77%), Postives = 136/192 (70.83%), Query Frame = -1
Query:  293 TVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKL 868
            ++DWA+W+ FW DERVV KNH DSNYKLA +  LSKVPI P +V++IN++LSAE A D+YE  ++ LV   ++ VS+ +  PKFDL+LLGMG DGHVASLFP H + +   +WV  I+DSPKPP ERITFT PVINS++     V G  KAEAV  A+   G N P  PA  V     +LVWFLDKPA+SKL
Sbjct:  138 SIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKVPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALVVCGSGKAEAVEAALKKTG-NVP--PAGSVS-AEDELVWFLDKPASSKL 325          
The following BLAST results are available for this feature:
BLAST of CX046767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
6PGL1_ARATH3.669e-7669.50Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL2_ORYSJ1.821e-7569.04Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL2_ORYSI1.821e-7569.04Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL1_ORYSJ9.992e-7468.88Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL1_ORYSI9.992e-7468.88Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL3_ORYSJ3.686e-6057.73Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI3.686e-6057.73Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL4_ORYSJ1.893e-5653.61Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSI1.893e-5653.61Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH6.733e-5456.77Probable 6-phosphogluconolactonase 5, chloroplasti... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10A12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10A12-B23-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046767 ID=CX046767; Name=CX046767; organism=Citrus sinensis; type=EST; length=868bp
TTTTTTTGGGCGAAAAAAGAAAAAGGCTTTCTCATTGAGGCTCCAACATT
ATTTACCTCATCTTACAAAAAGATCACCACACTTCTCAACCCCACTAGAA
AAGAGAGGATTAAAAAGAGAATATAGGGGGAAAAAAGGCCAAAATGGAGA
ATTCAACCCAAAGCAACATAAAAGAAGCGGCGCCTAACGGAAGAAGCTAA
AAGGATCAATAGTTCTCAAACCCCTCCACTACATACAAACATACACTTGG
GCAAGAATTGCTTTGACCCTACTCACAAAATTGAACACTTTCGAGCTTTG
AGGCAGCCGGCTTGTCCAAAAACCATACCAACTTCCCATTTGTTGGCTGG
ACCATTCGTGCTGGCAGTGATGGGCAATTAGGTCCAAGGTCATCAATCGC
CAAGTGCACAGCCTCTGCCTTGCTCTCACCTGTCACGACCACAACTACAA
TGGATGCTGAGTTGATGACAGGCAAAGTGAATGTGATCCTCTCTGGTGGG
GGTTTAGGCGAATCAGTGATAAAGCTTACCCACTGATTTTTCACATCAAG
CACCGAATGGTTAGGGAACAGTGAGGCAACATGGCCATCAGAGCCCATTC
CAAGAAGAATGAGGTCAAATTTGGGGCAGTCACTAATATCAGAGACACAG
ACCATCCGGGCTTTCACCAGCTGTCGGATGTCAAACTCATACTCATCACC
AGCCTCCTCTGCTGACAATGAATCATTAATGGAATGTACGTGACTGGGAA
CTATCGGAACCTTGGACAAAAGGCCTTCCTTTGCAAGCTTATAATTGCTA
TCAGCATGATTTTTTGCCACTACGCGTTCGTCTGCCCAGAATATATACCA
TTTAGCCCAGTCAACAGT
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