CX046762

Overview
NameCX046762
Unique NameCX046762
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO1_PRUDU (Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.932e-39
Identity = 80/98 (81.63%), Postives = 91/98 (92.86%), Query Frame = -3
Query:  288 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 581
            GGSLLVLSGL +AGTVIALTIATPLLVI SPVLVPA+ITV+L+ MGFL SGGFGVAA++VLSWIY+YVTG  PPGADQL+QAR KLAGKAR+++DRAE
Sbjct:   36 GGSLLVLSGLVLAGTVIALTIATPLLVIFSPVLVPALITVALITMGFLTSGGFGVAAVTVLSWIYKYVTGKQPPGADQLDQARHKLAGKARDIKDRAE 133          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO2_BRANA (Major oleosin NAP-II (Fragment) OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.290e-35
Identity = 71/98 (72.45%), Postives = 87/98 (88.78%), Query Frame = -3
Query:  288 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 581
            GGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL GK ++M+DRA+
Sbjct:   55 GGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGGKVQDMKDRAQ 152          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO1_ARATH (Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25140 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.701e-35
Identity = 70/98 (71.43%), Postives = 87/98 (88.78%), Query Frame = -3
Query:  288 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 581
            GGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  KA++++DRA+
Sbjct:   53 GGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQ 150          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO3_BRANA (Oleosin Bn-III OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.484e-34
Identity = 69/98 (70.41%), Postives = 87/98 (88.78%), Query Frame = -3
Query:  288 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 581
            GGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV++LI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  KA++++DRA+
Sbjct:   67 GGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVAMLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQ 164          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO5_BRANA (Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.064e-32
Identity = 68/97 (70.10%), Postives = 83/97 (85.57%), Query Frame = -3
Query:  291 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRA 581
            G SLLVLS LT+ GTVIAL +ATPLLVI SP+LVPA+ITV+LLI GFL+SG FG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  KA++M+DRA
Sbjct:   55 GDSLLVLSSLTLVGTVIALIVATPLLVIFSPILVPALITVALLITGFLSSGAFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDMKDRA 151          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO1_ORYSJ (Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=OLE16 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 9.004e-32
Identity = 64/98 (65.31%), Postives = 84/98 (85.71%), Query Frame = -3
Query:  288 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 581
            GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPPGADQL+ A+ +LA KAR++++ A+
Sbjct:   42 GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPGADQLDHAKARLASKARDIKEAAQ 139          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLE16_BROSE (Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.004e-32
Identity = 64/98 (65.31%), Postives = 84/98 (85.71%), Query Frame = -3
Query:  288 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 581
            GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I+++L+  GF+ SGG GVAA+SV SW+Y+Y+ G HPPGADQL+ A+ +LA KAR+++D A+
Sbjct:   61 GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAISMALMSAGFVTSGGLGVAAVSVFSWMYKYLAGKHPPGADQLDHAKARLASKARDIKDAAQ 158          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO1_MAIZE (Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.536e-31
Identity = 64/98 (65.31%), Postives = 83/98 (84.69%), Query Frame = -3
Query:  288 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 581
            GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPP ADQL+ A+ +LA KAR+++D A+
Sbjct:   50 GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPAADQLDHAKARLASKARDVKDAAQ 147          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO3_ARATH (Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.202e-29
Identity = 63/94 (67.02%), Postives = 81/94 (86.17%), Query Frame = -3
Query:  300 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMR 581
            GGSLLVLSGLT+AGTVIALT+ATPLLVI SPVLVPAV+TV+L+I GFLASGGFG+AAI+  SW+YR++TG    G+D++E ARMK+  + ++ +
Sbjct:   37 GGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTVALIITGFLASGGFGIAAITAFSWLYRHMTGS---GSDKIENARMKVGSRVQDTK 127          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO1_SOYBN (P24 oleosin isoform A OS=Glycine max PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17
Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = -3
Query:  312 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKA 581
            GG LL+L+GLT+AGT+  L +ATPL V+ SPVLVPA + + L + GFL SG FG+ A+S  SWI  Y+    P   +    A+  LA  A
Sbjct:   66 GGILLLLAGLTLAGTLTGLAVATPLFVLFSPVLVPATVAIGLAVAGFLTSGAFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAA 155          
The following BLAST results are available for this feature:
BLAST of CX046762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
OLEO1_PRUDU9.932e-3981.63Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1[more]
OLEO2_BRANA2.290e-3572.45Major oleosin NAP-II (Fragment) OS=Brassica napus ... [more]
OLEO1_ARATH8.701e-3571.43Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25... [more]
OLEO3_BRANA1.484e-3470.41Oleosin Bn-III OS=Brassica napus PE=2 SV=1[more]
OLEO5_BRANA1.064e-3270.10Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=... [more]
OLEO1_ORYSJ9.004e-3265.31Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=... [more]
OLE16_BROSE9.004e-3265.31Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 S... [more]
OLEO1_MAIZE1.536e-3165.31Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2[more]
OLEO3_ARATH3.202e-2967.02Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE... [more]
OLEO1_SOYBN8.182e-1747.78P24 oleosin isoform A OS=Glycine max PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10A09_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10A09-B17-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046762 ID=CX046762; Name=CX046762; organism=Citrus sinensis; type=EST; length=721bp
TTTTTTTTTACATTTCAAAGACCAATAACAAAAACCCTGCAGGAGCGCCC
CACCACATTAACAAAACTTATTACAGAGATTACCACGAATACAAAAAGGA
AAAAACACATTGGCACAAATTAACAAGAAAATTAACACAAAAGACAACCA
ATGACCCCTCAACTAGTATCATAGCCGTTTGATCTTCACCCATATCTTTA
TCAACCAACAACAACCCTTCATCACATGCATAACAACGCAGTTTAAGAAC
CCTGCTGCGAGCCAGTGATTTGCTGCTGCCCAAACTGCTCAGCCCTGTCC
CTCATCTCCCTAGCCTTACCGGCCAGCTTCATCCGCGCCTGCTCCAGCTG
ATCCGCCCCTGGTGGGTGCCCCCCAGTGACATACCTATAAATCCATGATA
AGACGCTGATGGCTGCTACACCGAATCCGCCAGAGGCCAAGAACCCCATG
ATGAGAAGAGAAACGGTGATAACCGCAGGGACAAGAACAGGACTACAAAT
GACTAGCAGTGGAGTAGCAATGGTCAGTGCAATGACAGTCCCAGCCATGG
TTAAGCCAGAGAGGACCAACAGAGACCCACCGGCTGTGACGGCGGTTGCC
GCCTTCACGACCTGGTGGGACCGGGGCTGACGGCTCTGCAGCTGTGTCTG
CTGGAGTGGTTGGTAATGTTCAGCCATATCGGTATTGATGTTAAATCTAA
CGGTGATTATTTGTCGATCCT
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