CX046731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046731 vs. ExPASy Swiss-Prot
Match: RL212_ARATH (60S ribosomal protein L21-2 OS=Arabidopsis thaliana GN=RPL21E PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 9.003e-71 Identity = 125/146 (85.62%), Postives = 135/146 (92.47%), Query Frame = -3 Query: 193 FLIKQTMATSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 630 F K + STYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEFKLRKK+ND LKADAKARGE ISTKRQPKGPKPGFMVEG TLETVTPIPYDVVNDLKGGY Sbjct: 19 FRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
BLAST of CX046731 vs. ExPASy Swiss-Prot
Match: RL211_ARATH (60S ribosomal protein L21-1 OS=Arabidopsis thaliana GN=RPL21A PE=2 SV=2) HSP 1 Score: 266.159 bits (679), Expect = 1.536e-70 Identity = 125/146 (85.62%), Postives = 134/146 (91.78%), Query Frame = -3 Query: 193 FLIKQTMATSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 630 F K + STYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEFKLRKKKNDELKA AKA GE ISTKRQPKGPKPGFMVEG TLETVTPIPYDVVNDLKGGY Sbjct: 19 FRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
BLAST of CX046731 vs. ExPASy Swiss-Prot
Match: RL21_CYAPA (60S ribosomal protein L21 OS=Cyanophora paradoxa GN=RPL21 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.895e-36 Identity = 82/141 (58.16%), Postives = 100/141 (70.92%), Query Frame = -3 Query: 220 AFLIKQTMATSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK-ARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 633 AF + STYL +KIG+YVDV N AVHKGMP K+YHGRTG VWNVTKRAIGVEINK+V +RIIKKRIHVR++HV+ S C + F R K+ND++K DA A+ V STKR P PK G ++ +G ET IPY+ Sbjct: 18 AFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158
BLAST of CX046731 vs. ExPASy Swiss-Prot
Match: RL21_DICDI (60S ribosomal protein L21 OS=Dictyostelium discoideum GN=rpl21 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.228e-35 Identity = 71/135 (52.59%), Postives = 93/135 (68.89%), Query Frame = -3 Query: 214 MATSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMVEGATLE--TVTPIPYDVV 612 + T+T+LRT+++GDYVD+K G VHKGMPHKFYHGRTGRVWNVT RA+GV INK+VG RII K+IHVR EHV+PS R ++N + +AK G+ + +R P PK GF V E V P+ Y+++ Sbjct: 25 LQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVVEAKKAGKWVDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELL 159
BLAST of CX046731 vs. ExPASy Swiss-Prot
Match: RL21A_YEAST (60S ribosomal protein L21-A OS=Saccharomyces cerevisiae GN=RPL21A PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.667e-35 Identity = 68/130 (52.31%), Postives = 96/130 (73.85%), Query Frame = -3 Query: 220 STYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 603 STYL+ YK+GD VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C +EF R K N +A+AKA+G + KRQP P+ +V EG +T+ P+PY+ Sbjct: 28 STYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
BLAST of CX046731 vs. ExPASy Swiss-Prot
Match: RL21B_YEAST (60S ribosomal protein L21-B OS=Saccharomyces cerevisiae GN=RPL21B PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.095e-35 Identity = 68/130 (52.31%), Postives = 96/130 (73.85%), Query Frame = -3 Query: 220 STYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 603 STYL+ YK+GD VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C +EF R K N +A+AKA+G + KRQP P+ +V EG +T+ P+PY+ Sbjct: 28 STYLKIYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
BLAST of CX046731 vs. ExPASy Swiss-Prot
Match: RL21B_SCHPO (60S ribosomal protein L21-B OS=Schizosaccharomyces pombe GN=rpl21b PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 8.802e-34 Identity = 68/130 (52.31%), Postives = 94/130 (72.31%), Query Frame = -3 Query: 220 STYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMVEGATLETVT--PIPYD 603 STYL+TYK+GD VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV+ S+C ++F R K N+ + +AKA+G+ + +RQP P V E VT P+ YD Sbjct: 28 STYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157
BLAST of CX046731 vs. ExPASy Swiss-Prot
Match: RL21A_SCHPO (60S ribosomal protein L21-A OS=Schizosaccharomyces pombe GN=rpl21a PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.802e-34 Identity = 68/130 (52.31%), Postives = 94/130 (72.31%), Query Frame = -3 Query: 220 STYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMVEGATLETVT--PIPYD 603 STYL+TYK+GD VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV+ S+C ++F R K N+ + +AKA+G+ + +RQP P V E VT P+ YD Sbjct: 28 STYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
BLAST of CX046731 vs. ExPASy Swiss-Prot
Match: RL21_HUMAN (60S ribosomal protein L21 OS=Homo sapiens GN=RPL21 PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 4.089e-31 Identity = 64/130 (49.23%), Postives = 89/130 (68.46%), Query Frame = -3 Query: 220 STYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 603 +TY+R YK GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK +G + KRQP P+ V G E + PIPY+ Sbjct: 28 ATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 157
BLAST of CX046731 vs. ExPASy Swiss-Prot
Match: RL21_CHILA (60S ribosomal protein L21 OS=Chinchilla lanigera GN=RPL21 PE=2 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 4.089e-31 Identity = 64/130 (49.23%), Postives = 89/130 (68.46%), Query Frame = -3 Query: 220 STYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 603 +TY+R YK GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK +G + KRQP P+ V G E + PIPY+ Sbjct: 28 ATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 157 The following BLAST results are available for this feature:
BLAST of CX046731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046731 ID=CX046731; Name=CX046731; organism=Citrus sinensis; type=EST; length=797bpback to top |