CX046730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: SCL3_ARATH (Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.958e-68 Identity = 122/158 (77.22%), Postives = 138/158 (87.34%), Query Frame = -2 Query: 283 ASAKMDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAWSCRK 756 +S + DSFLN++WGLSPKVMVVTEQDS+HNG TLMERLLE+LY+YAALFDCLE+ V RTS +R+KVEKMLFGEEIKNII+CEGFER+ERHEKLEKW QR DLA FGNVPLSY MLQARRLLQ DGYRI E++ C +ICW DRPL+SVSAW CRK Sbjct: 325 SSGRTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEESGCAVICWQDRPLYSVSAWRCRK 482
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.257e-26 Identity = 62/154 (40.26%), Postives = 91/154 (59.09%), Query Frame = -2 Query: 295 SAKMDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY-NCDGYRIAEDNRCVLICWHDRPLFSVSAW 753 S ++ LN++ + P ++ V EQ++NHNG+ ++R EAL+ Y++LFD LE S S S +R+ E L G +I N++A EG +R ERHE +W R A F + L QA LL Y DGYR+ E++ C++I W RPL + SAW Sbjct: 392 SGSIEKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYL-GRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAW 544
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.642e-26 Identity = 59/151 (39.07%), Postives = 89/151 (58.94%), Query Frame = -2 Query: 295 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY-NCDGYRIAEDNRCVLICWHDRPLFSVSAW 744 +D FL+++ + P +M V EQ++NHNG ++R E+L+ Y++LFD LE S+ + + ++ G +I N++ACEG +R ERHE L +W RF L F V + QA LL Y DGY + E+ C+L+ W RPL + SAW Sbjct: 359 IDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQDRV----MSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAW 505
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.371e-25 Identity = 56/147 (38.10%), Postives = 89/147 (60.54%), Query Frame = -2 Query: 307 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY-NCDGYRIAEDNRCVLICWHDRPLFS 744 ++ ++S+ + PK++ V EQ++NHNG ++R EAL+ Y+ LFD LE S + + L + ++ G +I N++ACEG +R ERHE L +W R + A V L QA LL + + DGYR+ E+N C+++ WH RPL + Sbjct: 382 IEKVVSSIKAMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEGSGVAPASQDLAMSELYLGRQICNVVACEGMDRVERHEPLTQWRTRMETAGVSPVHLGSNAYKQASMLLALFASGDGYRVEENNGCLMLGWHTRPLIA 528
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25 Identity = 58/152 (38.16%), Postives = 91/152 (59.87%), Query Frame = -2 Query: 295 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLES-SVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY-NCDGYRIAEDNRCVLICWHDRPLFSVSAW 744 ++ L+++ + P ++ + EQ++NHNG ++R E+L+ Y+ LFD LE VS + + + ++ G++I N++ACEG ER ERHE L +W R A F V L QA LL + DGYR+ E+N C+++ WH RPL + SAW Sbjct: 423 IERVLSAVKDMKPDIVTIVEQEANHNGPVFLDRFTESLHYYSTLFDSLEGCGVSPVNTQDKLMSEVYLGQQICNVVACEGPERVERHETLAQWRARLGSAGFDPVNLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAW 574
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.900e-25 Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = -2 Query: 295 LSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYN-CDGYRIAEDNRCVLICWHDRPLFSVSAW 714 + P + V EQ+SNHNG ++R E+L+ Y+ LFD LE + S S +++ E L G++I N++ACEG +R ERHE L +W RF + F L QA LL +N +GYR+ E+N C+++ WH RPL + SAW Sbjct: 430 IKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGAPS--SQDKVMSEVYL-GKQICNLVACEGPDRVERHETLSQWSNRFGSSGFAPAHLGSNAFKQASTLLALFNGGEGYRVEENNGCLMLSWHTRPLITTSAW 567
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.177e-24 Identity = 60/164 (36.59%), Postives = 95/164 (57.93%), Query Frame = -2 Query: 295 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSM-------------ERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY-NCDGYRIAEDNRCVLICWHDRPLFSVSAW 744 ++ LNS+ ++PK++ + EQ++NHN ++R EAL+ Y+ +FD LESS S +S + L + ++ G +I N++ACEG +R ERHE L +W R + + F V L QA LL + DGYR+ E++ C+++ WH RPL + SAW Sbjct: 410 IEKVLNSIKQINPKIVTLVEQEANHNAGVFIDRFNEALHYYSTMFDSLESSGSSSSASPTGILPQPPVNNQDLVMSEVYLGRQICNVVACEGSDRVERHETLNQWRVRMNSSGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENDGCLMLGWHTRPLIATSAW 573
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.629e-24 Identity = 58/141 (41.13%), Postives = 85/141 (60.28%), Query Frame = -2 Query: 295 LSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYN-CDGYRIAEDNRCVLICWHDRPLFSVSAW 714 + P + V EQ+S+HNG ++R E+L+ Y+ LFD LE S S +++ E L G++I N++ACEG +R ERHE L +W RF + F L QA LL +N +GYR+ E+N C+++ WH RPL + SAW Sbjct: 436 IKPVIFTVVEQESSHNGPVFLDRFTESLHYYSTLFDSLEGVPS--SQDKVMSEVYL-GKQICNLVACEGPDRVERHETLSQWANRFGSSGFAPAHLGSNAFKQASMLLALFNGGEGYRVEENNGCLMLGWHTRPLITTSAW 573
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: SCL18_ARATH (Scarecrow-like protein 18 OS=Arabidopsis thaliana GN=SCL18 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.899e-23 Identity = 54/148 (36.49%), Postives = 91/148 (61.49%), Query Frame = -2 Query: 295 FLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQ-SYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 735 FL+++ L+ +++ + E+++NH + + R EA+ Y A+FD LE+++ S ERL +E+ FG+EI +++A E ERK+RH + E W + F NVP+ + QA+ LL+ Y +GY + N + + W +RPLFSVS+W Sbjct: 297 FLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSW 444
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.945e-23 Identity = 57/141 (40.43%), Postives = 82/141 (58.16%), Query Frame = -2 Query: 295 LSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNC-DGYRIAEDNRCVLICWHDRPLFSVSAW 714 + P + V EQ+SNHNG ++R E+L+ Y+ LFD LE + S +++ E L G++I N++ACEG +R ERHE L +W RF + L QA LL +N GYR+ E N C+++ WH RPL + SAW Sbjct: 443 IKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPN--SQDKVMSEVYL-GKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAW 580 The following BLAST results are available for this feature:
BLAST of CX046730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046730 ID=CX046730; Name=CX046730; organism=Citrus sinensis; type=EST; length=757bpback to top |