EY662378

Overview
NameEY662378
Unique NameEY662378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length579
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2745 contig Csv1_Contig2745:280..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662378 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 8.537e-71
Identity = 114/178 (64.04%), Postives = 134/178 (75.28%), Query Frame = 1
Query:   13 CECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHKCEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLYIKEQDACIERNGSRFGWFFTXXXXXXXXXXXXXXXXXXKYRLRSYMDSEIMAIMSQYMPLDNNHNNEVPNEAQP 546
            CECP+VKGVQY+GDGY SC  YGPARC++NNGGCWSDT+NGLTFSACS+S  TGC CP+GF+GDG  CEDINECKERS CQC GC C+N+WGG++C C G+ LYI +QD CIER GS+  W+ T                  KYR RSYMDSEIM IMSQYMPL++    EVP+EA+P
Sbjct:  445 CECPVVKGVQYKGDGYTSCTPYGPARCTMNNGGCWSDTRNGLTFSACSDSVSTGCKCPEGFQGDGLTCEDINECKERSVCQCSGCRCKNSWGGYKCSCSGDRLYINDQDTCIERYGSKTAWWLTFLILAIVAVAGLAGYIFYKYRFRSYMDSEIMTIMSQYMPLESQRAREVPSEAEP 622          
BLAST of EY662378 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 1.559e-64
Identity = 109/171 (63.74%), Postives = 124/171 (72.51%), Query Frame = 1
Query:   13 CECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHKCEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLYIKEQDACIERNGSRFGWFFTXXXXXXXXXXXXXXXXXXKYRLRSYMDSEIMAIMSQYMPLDNNHNNE 525
            CECP+V GVQY+GDGY SC+ YGPARCSIN GGCWS+TK GLTFSACS  + +GC CP GF+GDG KCE         ACQCDGC+C+N WGGFECKC GN LY+KEQD CIER+GSR GWF T                  KYRLRSYMDSEIMAIMSQYMPL++ +  +
Sbjct:  444 CECPVVNGVQYKGDGYTSCEPYGPARCSINQGGCWSETKKGLTFSACSNLETSGCRCPPGFKGDGLKCE---------ACQCDGCNCKNKWGGFECKCSGNRLYMKEQDTCIERSGSRIGWFPTFVILAAVASICVGGYVFYKYRLRSYMDSEIMAIMSQYMPLESQNTTD 605          
BLAST of EY662378 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 3.841e-63
Identity = 104/172 (60.47%), Postives = 129/172 (75.00%), Query Frame = 1
Query:   13 CECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHKCEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLYIKEQDACIE-RNGSRFGWFFTXXXXXXXXXXXXXXXXXXKYRLRSYMDSEIMAIMSQYMPLDNNHNNE 525
            CECP+V GVQY+GDGY SC+ YGPARCS+NNG CWS+T+ GLTFS+CS+S+ +GC CP GF GDG KCEDI+ECKE+SAC+CDGC C+N WGG+ECKC  N +Y+KE+D CIE R+GSR    FT                  KY L+SYMDSEI++IMSQY+PLD+   N+
Sbjct:  443 CECPVVDGVQYKGDGYTSCKPYGPARCSMNNGDCWSETRKGLTFSSCSDSETSGCRCPLGFLGDGLKCEDIDECKEKSACKCDGCKCKNNWGGYECKCSNNSIYMKEEDTCIERRSGSRSRGLFTIVVLTAIAGISLGAYIFYKYHLQSYMDSEIVSIMSQYIPLDSQSINQ 614          
BLAST of EY662378 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.495e-54
Identity = 96/183 (52.46%), Postives = 116/183 (63.39%), Query Frame = 1
Query:   13 CECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDG-HKCEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLYIKEQDACIERNGS--RFGWFFTXXXXXXXXXXXXXXXXXXKYRLRSYMDSEIMAIMSQYMPLDNNHNNEVPNEAQPLR 552
            CECP V GVQ++GDGY  C+  GP RC+INNGGCW + ++G  FSAC +     C CP GF+GDG  KCEDINECKE+ ACQC  CSC+NTWG +EC C G+LLYI++ D CI + G+  R  W                     KYRLR YMDSEI AIM+QYMPLD+    E+PN     R
Sbjct:  447 CECPTVDGVQFKGDGYSHCEPSGPGRCTINNGGCWHEERDGHAFSACVDKDSVKCECPPGFKGDGTKKCEDINECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKTGAQVRSAWAAVWLIMLSLGLAAAGAYLVYKYRLRQYMDSEIRAIMAQYMPLDS--QPEIPNHVNDER 627          
BLAST of EY662378 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.559e-54
Identity = 92/179 (51.40%), Postives = 118/179 (65.92%), Query Frame = 1
Query:   13 CECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHK-CEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLYIKEQDACIERNG-SRFGWFFTXXXXXXXXXXXXXXXXXXKYRLRSYMDSEIMAIMSQYMPLDNNHNNEVPNEAQ 543
            C+CPIV+GV++ GDGY  C+A G  RC INNGGCW  T+ G T+SAC +    GC CP GF GDG K C+D+NEC+E++ACQC  C C+NTWG +EC C G+LLYI+E D CI R+    F W                     KYR+R+YMDSEI AIM+QYMPLDNN N ++ ++ +
Sbjct:  446 CQCPIVQGVKFLGDGYTHCEASGALRCGINNGGCWKQTQMGKTYSACRDDHSKGCKCPPGFIGDGLKECKDVNECEEKTACQCRDCKCKNTWGSYECSCSGSLLYIREHDICINRDARGDFSWGVIWIIIMGLGAAALGAYTVYKYRIRTYMDSEIRAIMAQYMPLDNNPNTQLSSQLE 624          
BLAST of EY662378 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.113e-53
Identity = 95/183 (51.91%), Postives = 116/183 (63.39%), Query Frame = 1
Query:   13 CECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDG-HKCEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLYIKEQDACIERNGS--RFGWFFTXXXXXXXXXXXXXXXXXXKYRLRSYMDSEIMAIMSQYMPLDNNHNNEVPNEAQPLR 552
            C CPIV GV+++GDGY  C+  GP RC+INNGGCW + ++G  FSAC +     C CP GF+GDG  KCEDINECKE+ ACQC  CSC+NTWG +EC C G+LLY+++ D CI + GS  +  W                     KYRLR YMDSEI AIM+QYMPLD+    EVPN     R
Sbjct:  447 CVCPIVDGVRFKGDGYSHCEPSGPGRCTINNGGCWHEERDGHAFSACVDKDSVKCECPPGFKGDGVKKCEDINECKEKKACQCPECSCKNTWGSYECSCSGDLLYMRDHDTCISKTGSQVKSAWAAVWLIMLSLGLAAAGAYLVYKYRLRQYMDSEIRAIMAQYMPLDS--QPEVPNHTNDER 627          
BLAST of EY662378 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 5.203e-52
Identity = 94/183 (51.37%), Postives = 114/183 (62.30%), Query Frame = 1
Query:   13 CECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHK-CEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLYIKEQDACIERNGS--RFGWFFTXXXXXXXXXXXXXXXXXXKYRLRSYMDSEIMAIMSQYMPLDNNHNNEVPNEAQPLR 552
            CECP+V GVQ++GDGY +C+  G  RC INNGGCW D +NG  FSAC +     C CP GF+GDG K CEDI+ECK++ ACQC  CSC+NTWG + C C G+LLYIK+QD CI +  S  +  W                     KYR+R YMDSEI AIM+QYMPLD+    E PN     R
Sbjct:  442 CECPLVDGVQFKGDGYTTCEVSGHGRCKINNGGCWHDARNGHAFSACLDDGGVKCQCPAGFKGDGVKNCEDIDECKDKKACQCPECSCKNTWGSYNCSCSGDLLYIKDQDTCISKTASQAKSTWAAFWVVLIALAMIAGGGFLVYKYRIRQYMDSEIRAIMAQYMPLDS--QEEGPNHVNHQR 622          
BLAST of EY662378 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 7.775e-48
Identity = 82/174 (47.13%), Postives = 108/174 (62.07%), Query Frame = 1
Query:   13 CECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHK-CEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLYIKEQDACI---ERNGSRFGWFFTXXXXXXXXXXXXXXXXXXKYRLRSYMDSEIMAIMSQYMPLDNNHNN 522
            CECP V+GV++ GDGY  C+A G   C INNGGCW +++ G T+SAC +     C CP GF+GDG K CED++ECKE++ CQC  C C+NTWG +EC C   LLY++E D CI   +   ++  W F                   KYR+RSYMD+EI  IM+QYMPL++   N
Sbjct:  442 CECPTVQGVKFVGDGYTHCKASGALHCGINNGGCWRESRGGFTYSACVDDHSKDCKCPLGFKGDGVKNCEDVDECKEKTVCQCPECKCKNTWGSYECSCSNGLLYMREHDTCIGSGKVGTTKLSWSFLWILIIGVGVAGLSGYAVYKYRIRSYMDAEIRGIMAQYMPLESQPPN 615          
The following BLAST results are available for this feature:
BLAST of EY662378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VSR7_ARATH8.537e-7164.04Vacuolar-sorting receptor 7 OS=Arabidopsis thalian... [more]
VSR6_ARATH1.559e-6463.74Vacuolar-sorting receptor 6 OS=Arabidopsis thalian... [more]
VSR5_ARATH3.841e-6360.47Vacuolar-sorting receptor 5 OS=Arabidopsis thalian... [more]
VSR3_ARATH2.495e-5452.46Vacuolar-sorting receptor 3 OS=Arabidopsis thalian... [more]
VSR2_ARATH5.559e-5451.40Vacuolar-sorting receptor 2 OS=Arabidopsis thalian... [more]
VSR4_ARATH2.113e-5351.91Vacuolar-sorting receptor 4 OS=Arabidopsis thalian... [more]
VSR1_PEA5.203e-5251.37Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP... [more]
VSR1_ARATH7.775e-4847.13Vacuolar-sorting receptor 1 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-043-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662378 ID=EY662378; Name=EY662378; organism=Citrus sinensis; type=EST; length=579bp
CCACGCGTCCGGTGTGAATGTCCGATTGTGAAAGGTGTCCAGTATAGAGG
AGATGGGTACATATCCTGTCAAGCTTATGGACCTGCAAGGTGTTCAATAA
ACAACGGTGGGTGCTGGTCGGATACCAAAAATGGATTAACCTTCTCAGCT
TGCTCAGAGTCCCAAATAACAGGCTGTCATTGTCCAAAAGGCTTTCGCGG
AGATGGTCATAAATGTGAAGATATCAACGAATGCAAGGAGCGTTCTGCTT
GTCAGTGTGATGGTTGCTCCTGTCAGAATACTTGGGGAGGATTTGAGTGC
AAGTGCAAAGGCAACCTTCTTTATATAAAGGAGCAGGATGCTTGTATAGA
GAGAAATGGATCTCGATTTGGATGGTTCTTCACCTTCTTGGTCCTGGCAG
TTGTGGTGGGTGCTGGTGTAGCTGGTTATGTATTCTACAAATACAGACTC
CGGTCTTACATGGACTCGGAGATCATGGCTATCATGTCACAATACATGCC
TCTTGACAACAACCACAATAATGAAGTTCCAAATGAAGCACAGCCTTTAC
GACATGGTTCATCAGTGTAAGCTGAAGCA
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