FC921929

Overview
NameFC921929
Unique NameFC921929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length267
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2429 contig Csv1_Contig2429:92..358. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.734e-26
Identity = 54/87 (62.07%), Postives = 63/87 (72.41%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNEPVDMGEALGLSIQKARPLE 266
            VW +P +F+PERFLT HKD+D+RG NFELLPFGSGRR C G+S  L ++ FTLA LL  FD   PS EPVDM E  G +  KA PLE
Sbjct:  426 VWSDPLEFKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPVDMTEFFGFTNTKATPLE 512          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.876e-26
Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNEPVDMGEALGLSIQKARPLE 266
            VW +P +F+P+RFLT HKDIDV+G +F+LLPFGSGRR CPG+SF LQ +   LA+ L  F+   PS EP+DM EA G++  KA PLE
Sbjct:  424 VWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTEPLDMTEAFGVTNTKATPLE 510          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.608e-23
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNEPVDMGEALGLSIQKARPLE 266
            VW  P +F+PERFLT  KDID++GQ+F+LLPFG GRR CPG++  LQ +  TLA+ L  F+   PS EP+DM E    +  KA PLE
Sbjct:  421 VWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSFEILNPSTEPLDMTEVFRATNTKATPLE 507          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 1.468e-22
Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNEPVDMGEALGLSIQKARPLE 266
            VW +P +F+PERFL+ HKD+DVRGQNFELLPFGSGRR C G+S  L ++ + LA  L  F+   PS E +D+ E L     KA PLE
Sbjct:  443 VWPDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEILNPSPESIDVTEVLEFVTTKATPLE 529          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.163e-19
Identity = 48/91 (52.75%), Postives = 62/91 (68.13%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDF-----ATPSNEPVDMGEALGLSIQKARPL 263
            VWE P KF+PERFL R  + DV+G++FEL+PFGSGRR CPG+S AL+ M   LA+LL  FD+       P N  +DM E  GL++ KA+ L
Sbjct:  415 VWENPMKFEPERFLLR--ETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGN--IDMSETFGLTLHKAKSL 501          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.421e-19
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPL 263
            WE P ++QPERFL  + D DV+G NF+LLPFG+GRR CPG SFA+ V+E  LA L+  FDFA P     E +DM E +G++ ++  PL
Sbjct:  413 WENPEEYQPERFL--NSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPEDLDMTETIGITTRRKLPL 498          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.194e-18
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPS---NEPVDMGEALGLSIQKARPL 263
            VW+ P +F+PERFL   KD+DVRG+++EL PFG+GRR CPG+  A++ +   LA+LL  FD+  P    +E +DM E  GL++ K  PL
Sbjct:  414 VWDNPSQFEPERFLG--KDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKTNPL 500          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.888e-18
Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPL 263
            WE P +F PERFL  + DID++G  FELLPFGSGRR CPG SFA+ V+E  LA L+  F+FA P     E +DM E  G++ ++  PL
Sbjct:  413 WENPEEFCPERFL--NNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPEDLDMTECTGIATRRKSPL 498          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.089e-17
Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKD-IDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATP-SNEPVDMGEALGLSIQKARPL 263
            WE P +F+PERF+   K  +DVRGQ++ LLPFGSGRRACPG S ALQV+   LA L+Q F +     N  V+M E  G+++ +A P+
Sbjct:  410 WENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKVDCDNGKVNMEEKAGITLPRAHPI 496          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.089e-17
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPS---NEPVDMGEALGLSIQKARPL 263
            VWE   +F+PERFL   KDID+RG+++EL PFG+GRR CPG+  A++ +   LA+LL  FD+  P+   +E +DM E  GL++ K  PL
Sbjct:  415 VWENSSRFKPERFLG--KDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPL 501          
The following BLAST results are available for this feature:
BLAST of FC921929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
C82A3_SOYBN3.734e-2662.07Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C82A4_SOYBN4.876e-2658.62Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C82A2_SOYBN8.608e-2354.02Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C82A1_PEA1.468e-2255.17Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C76C3_ARATH1.163e-1952.75Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C71A2_SOLME4.421e-1952.27Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C76C1_ARATH2.194e-1848.31Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71A4_SOLME4.888e-1852.27Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C93A3_SOYBN1.089e-1750.57Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C76C2_ARATH1.089e-1748.31Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06054A10T7 RindPdigS Citrus sinensis cDNA clone C06054A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921929 ID=FC921929; Name=FC921929; organism=Citrus sinensis; type=EST; length=267bp
ACGNTGTCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACA
AGGCACAAGGATATTGATGTCAGAGGACAAAATTTTGAATTGTTACCTTT
TGGTAGTGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTA
TGGAATTTACACTTGCTGCTTTACTTCAAGGCTTTGATTTTGCAACCCCA
TCAAATGAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAA
AGCTAGACCACTTGAAG
back to top