DN617777

Overview
NameDN617777
Unique NameDN617777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6089 contig Csv1_Contig6089:386..1022. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617777 vs. ExPASy Swiss-Prot
Match: ZIP5_ARATH (Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.973e-37
Identity = 78/140 (55.71%), Postives = 99/140 (70.71%), Query Frame = 2
Query:  101 ECTCDPEDDDRDKTQALKYKLAAIASILVAGAIGVLLPVLGKTIKALSPERNIFFLIKAFAAGVILSTGFIHVLPDAFENLTSPCLDEHPWGDFPFTGFAAMVAAIGTLMIDAFATSYATSYYRKSHFGEAENNASDEEK 520
            +C C  EDD+ +K  A KYK+AAI S+L AG IGV+ P+LGK   +L PE   FF+ KAFAAGVIL+TGF+HVLP+ +E LTSPCL    W +FPFTGF AMVAAI TL +D    S+ATSY+ K+HF  ++     EE+
Sbjct:   30 KCECSHEDDEANKAGAKKYKIAAIPSVLAAGVIGVMFPLLGKFFPSLKPETTFFFVTKAFAAGVILATGFMHVLPEGYEKLTSPCLKGEAW-EFPFTGFIAMVAAILTLSVD----SFATSYFHKAHFKTSKRIGDGEEQ 164          
BLAST of DN617777 vs. ExPASy Swiss-Prot
Match: ZIP1_ARATH (Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.861e-36
Identity = 81/179 (45.25%), Postives = 111/179 (62.01%), Query Frame = 2
Query:  101 ECTCDPEDDDRDKTQ-ALKYKLAAIASILVAGAIGVLLPVLGKTIKALSPERNIFFLIKAFAAGVILSTGFIHVLPDAFENLTSPCLDEHPWGDFPFTGFAAMVAAIGTLMIDAFATSYATSYYRKSHFGEAENNASDEEKVGEXXXXXXXXXXXXXXXXXXFLEYSGESELLRHRVIS 634
            +CT   +   +D+ + A K KL +IA +LVAG +GV LP++GK I AL PE +IFF++KAFAAGVIL TGF+H+LPDAFE L+SPCL++   G FPF GF AM++A+GTLMID F    AT YY++ HF    +N    ++V                         G +EL+R R++S
Sbjct:   31 DCTSHDDPVSQDEAEKATKLKLGSIALLLVAGGVGVSLPLIGKRIPALQPENDIFFMVKAFAAGVILCTGFVHILPDAFERLSSPCLEDTTAGKFPFAGFVAMLSAMGTLMIDTF----ATGYYKRQHF----SNNHGSKQVNVVVDEEEHAGHVHIHTHASHGHTHGSTELIRRRIVS 201          
BLAST of DN617777 vs. ExPASy Swiss-Prot
Match: ZIP3_ARATH (Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 8.291e-36
Identity = 82/149 (55.03%), Postives = 101/149 (67.79%), Query Frame = 2
Query:  101 ECTCDPEDDDRDKTQALKYKLAAIASILVAGAIGVLLPVLGKTIKALSPERNIFFLIKAFAAGVILSTGFIHVLPDAFENLTSPCLDEHPWGDFPFTGFAAMVAAIGTLMIDAFATSYATSYYRKSHF--------GEAENNASDEEKV 523
            +C C  EDD  +K  A KYK+AAI ++L+AG IGVL P+LGK   +L PE   FF+ KAFAAGVIL+TGF+HVLP+A+E L SPCL    W +FPFTGF AM+AAI TL +D FATS   S+Y KSH         GE   ++ D EKV
Sbjct:   35 KCECSHEDDHENKAGARKYKIAAIPTVLIAGIIGVLFPLLGKVFPSLRPETCFFFVTKAFAAGVILATGFMHVLPEAYEMLNSPCLTSEAW-EFPFTGFIAMIAAILTLSVDTFATS---SFY-KSHCKASKRVSDGETGESSVDSEKV 178          
BLAST of DN617777 vs. ExPASy Swiss-Prot
Match: ZIP10_ARATH (Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.049e-30
Identity = 62/131 (47.33%), Postives = 92/131 (70.23%), Query Frame = 2
Query:  134 DKTQALKYKLAAIASILVAGAIGVLLPVLGKTIKALSPERNIFFLIKAFAAGVILSTGFIHVLPDAFENLTSPCLDEHPWGDFPFTGFAAMVAAIGTLMIDAFATSYATSYYRKSHFGEAENNASDEEKVG 526
            DK +AL  KL +I SIL+   IGV LP   ++I A  PE++ F ++K+FA+G+ILSTGF+HVLPD+FE L+SPCL+++PW  FPF GF AM++A+ TLM+D+  TS  T   RK    +  +  + ++++G
Sbjct:   44 DKNKALDLKLLSIFSILITSLIGVCLPFFARSIPAFQPEKSHFLIVKSFASGIILSTGFMHVLPDSFEMLSSPCLNDNPWHKFPFAGFVAMMSAVFTLMVDSITTSVFTKSGRKDLRADVASVETPDQEIG 174          
BLAST of DN617777 vs. ExPASy Swiss-Prot
Match: ZIP8_ARATH (Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.789e-30
Identity = 64/125 (51.20%), Postives = 85/125 (68.00%), Query Frame = 2
Query:   86 NVVRGECTCDPEDDDRDKTQALKYKLAAIASILVAGAIGVLLPVLGKTIKALSPERNIFFLIKAFAAGVILSTGFIHVLPDAFENLTSPCLDEHPWGDFPFTGFAAMVAAIGTLMIDAFATSYAT 460
            + V  EC  D  D   DKT+AL  K+ AI +ILV   IGV  P+  + +  L P+  IF +IK FA+G+IL TGF+HVLPD+FE L+SPCL+++PW  FPFTGF AM++ + TL ID+ ATS  T
Sbjct:   27 STVPKECETDSTDSCIDKTKALPLKIVAIVAILVTSMIGVAAPLFSRYVTFLHPDGKIFMIIKCFASGIILGTGFMHVLPDSFEMLSSPCLEDNPWHKFPFTGFVAMLSGLVTLAIDSIATSLYT 151          
BLAST of DN617777 vs. ExPASy Swiss-Prot
Match: ZIP12_ARATH (Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.731e-28
Identity = 62/108 (57.41%), Postives = 78/108 (72.22%), Query Frame = 2
Query:  134 DKTQALKYKLAAIASILVAGAIGVLLPVLGKTIKALSPERNIFFLIKAFAAGVILSTGFIHVLPDAFENLTSPCL-DEHPWGDFPFTGFAAMVAAIGTLMIDAFATSY 454
            +K  ALKYK+ A  SIL+AG  GV LP+ G     L  E N F  +KAFAAGVIL+TGF+H+LPDA E+LTS CL +E PWGDFP TG  AM A+I T++I++FA+ Y
Sbjct:   42 EKASALKYKIIAFFSILIAGVFGVCLPIFG-----LKTESNFFMYVKAFAAGVILATGFVHILPDATESLTSSCLGEEPPWGDFPMTGLVAMAASILTMLIESFASGY 144          
BLAST of DN617777 vs. ExPASy Swiss-Prot
Match: ZIP4_ARATH (Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.363e-28
Identity = 65/135 (48.15%), Postives = 85/135 (62.96%), Query Frame = 2
Query:  110 CDPEDDD--RDKTQALKYKLAAIASILVAGAIGVLLPVLGKTIKALSPERNIFFLIKAFAAGVILSTGFIHVLPDAFENLTSPCLDEHPWGDFPFTGFAAMVAAIGTLMIDAFATSYATSYYRKSHFGEAENNAS 508
            CD  + D  RD + A   K  AIASIL+AGA GV +P++G+  + L  E N+F   KAFAAGVIL+TGF+H+L    E L++PCL + PW  FPF GF AMVAA+ TL++D   T Y   Y RK    +A   A+
Sbjct:   10 CDAGESDLCRDDSAAFLLKFVAIASILLAGAAGVAIPLIGRNRRFLQTEGNLFVAAKAFAAGVILATGFVHMLAGGTEALSNPCLPDFPWSKFPFPGFFAMVAALATLLVDFMGTQY---YERKQERNQAATEAA 141          
BLAST of DN617777 vs. ExPASy Swiss-Prot
Match: IRT1_ARATH (Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.387e-27
Identity = 60/121 (49.59%), Postives = 83/121 (68.60%), Query Frame = 2
Query:  101 ECTCDPEDDDRDKTQALKYKLAAIASILVAGAIGVLLPVLGKTIKALSPERNIFFLIKAFAAGVILSTGFIHVLPDAFENLTSPCLDEHPWGDFPFTGFAAMVAAIGTLMIDAFATSYATS 463
            EC  +  +   +K +AL  K+ AI  IL+A  IGV  P+  + +  L P+ NIF +IK FA+G+IL TGF+HVLPD+FE L+S CL+E+PW  FPF+GF AM++ + TL ID+ ATS  TS
Sbjct:   25 ECGSESANPCVNKAKALPLKVIAIFVILIASMIGVGAPLFSRNVSFLQPDGNIFTIIKCFASGIILGTGFMHVLPDSFEMLSSICLEENPWHKFPFSGFLAMLSGLITLAIDSMATSLYTS 145          
BLAST of DN617777 vs. ExPASy Swiss-Prot
Match: IRT3_ARATH (Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 7.779e-26
Identity = 61/132 (46.21%), Postives = 80/132 (60.61%), Query Frame = 2
Query:  104 CTCDPEDDDRDKTQALKYKLAAIASILVAGAIGVLLPVLGKTIKALSPERNIFFLIKAFAAGVILSTGFIHVLPDAFENLTSPCLDEHPWGDFPFTGFAAMVAAIGTLMIDAFATSYATSYYRKSHFGEAEN 499
            C     D  RD + A   K  AIASIL+AGA GV +P++G+  + L  + N+F   KAFAAGVIL+TGF+H+L    E L +PCL + PW  FPF GF AM+AA+ TL +D   T Y   Y RK     +E+
Sbjct:   10 CNASESDLCRDDSAAFLLKFVAIASILLAGAAGVTIPLIGRNRRFLQTDGNLFVTAKAFAAGVILATGFVHMLAGGTEALKNPCLPDFPWSKFPFPGFFAMIAALITLFVDFMGTQY---YERKQEREASES 138          
BLAST of DN617777 vs. ExPASy Swiss-Prot
Match: ZIP7_ARATH (Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.263e-25
Identity = 61/132 (46.21%), Postives = 85/132 (64.39%), Query Frame = 2
Query:  110 CDPEDDD---RDKTQALKYKLAAIASILVAGAIGVLLPVLGKTIKALSPERNIFFLIKAFAAGVILSTGFIHVLPDAFENLTSPCLDEHPWGDFPFTGFAAMVAAIGTLMIDAFATSYATSYYRKSHFGEAE 496
            C  E  D    +  +A K K+ AI SILVA  IGV LP+  ++I AL P+R +  ++K  A+GVIL+TGF+HVLPD+F++LTS CL E PW  FPF  F  M++A+  LMI++FA     +Y R++   E E
Sbjct:   37 CKAESGDLSCHNNKEAQKLKIIAIPSILVASMIGVSLPLFSRSIPALGPDREMSVIVKTLASGVILATGFMHVLPDSFDDLTSKCLPEDPWQKFPFATFITMISALLVLMIESFA---MCAYARRTSKREGE 165          
The following BLAST results are available for this feature:
BLAST of DN617777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
ZIP5_ARATH1.973e-3755.71Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5... [more]
ZIP1_ARATH4.861e-3645.25Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1... [more]
ZIP3_ARATH8.291e-3655.03Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3... [more]
ZIP10_ARATH1.049e-3047.33Probable zinc transporter 10 OS=Arabidopsis thalia... [more]
ZIP8_ARATH1.789e-3051.20Probable zinc transporter 8 OS=Arabidopsis thalian... [more]
ZIP12_ARATH3.731e-2857.41Probable zinc transporter 12 OS=Arabidopsis thalia... [more]
ZIP4_ARATH6.363e-2848.15Zinc transporter 4, chloroplastic OS=Arabidopsis t... [more]
IRT1_ARATH5.387e-2749.59Fe(2+) transport protein 1 OS=Arabidopsis thaliana... [more]
IRT3_ARATH7.779e-2646.21Fe(2+) transport protein 3, chloroplastic OS=Arabi... [more]
ZIP7_ARATH2.263e-2546.21Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617777 ID=DN617777; Name=DN617777; organism=Citrus sinensis; type=EST; length=637bp
GTTTTCAGATTTCAGATTCTTTATCATGATCACTTCTCATCGTCTTTTCA
TCACTTTCTTTTGCATTCTTCTAATACTACTTCCCAACGTAGTACGAGGA
GAATGCACGTGCGATCCTGAAGACGATGATCGAGACAAGACTCAAGCCTT
AAAATATAAACTCGCCGCCATCGCTTCGATACTCGTGGCCGGAGCCATTG
GAGTTTTACTTCCGGTCCTCGGAAAAACTATCAAGGCACTAAGTCCGGAG
AGAAATATTTTCTTCCTAATCAAGGCCTTCGCCGCCGGAGTTATATTATC
GACGGGGTTCATCCACGTGCTTCCCGACGCCTTCGAGAACTTAACGTCGC
CCTGCCTCGATGAACATCCATGGGGGGATTTTCCGTTCACCGGATTCGCT
GCCATGGTTGCTGCTATCGGGACTCTGATGATTGATGCTTTTGCAACTTC
TTATGCGACTTCTTATTATCGCAAGTCTCACTTTGGTGAAGCGGAGAATA
ACGCATCAGATGAAGAGAAAGTTGGGGAGCATGCAGGTCACGTGCATGTT
CATACCCATGCAACTGATGGGCATGCTCATGGATTTCTTGAATATTCCGG
TGAATCGGAGCTTCTACGACACCGTGTCATATCTCTG
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