FC921918

Overview
NameFC921918
Unique NameFC921918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length265
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921918 vs. ExPASy Swiss-Prot
Match: AI5L6_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arabidopsis thaliana GN=ABF3 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.179e-17
Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 3
Query:   12 SSPSPVPYVFGRVRKSGA-LEKVVERRHRRMIKNRESAARSRARKQAYTXXXXXXXXXXXXXNQELERKQ 218
            +S SPVPY+FGRVRK+GA LEKV+ERR +RMIKNRESAARSRARKQAYT             N+EL++KQ
Sbjct:  349 ASLSPVPYMFGRVRKTGAVLEKVIERRQKRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQ 418          
BLAST of FC921918 vs. ExPASy Swiss-Prot
Match: AI5L4_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arabidopsis thaliana GN=ABF1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.995e-16
Identity = 45/68 (66.18%), Postives = 50/68 (73.53%), Query Frame = 3
Query:   21 SPVPYVFGRVRKSGA-LEKVVERRHRRMIKNRESAARSRARKQAYTXXXXXXXXXXXXXNQELERKQA 221
            SPVPYVFGR R+S   LEKVVERR +RMIKNRESAARSRARKQAYT             NQ+L++KQA
Sbjct:  291 SPVPYVFGRGRRSNTGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEAEIESLKLVNQDLQKKQA 358          
BLAST of FC921918 vs. ExPASy Swiss-Prot
Match: AI5L5_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.023e-15
Identity = 47/73 (64.38%), Postives = 50/73 (68.49%), Query Frame = 3
Query:   12 SSPSPVPYVFG---RVRKSGALEKVVERRHRRMIKNRESAARSRARKQAYTXXXXXXXXXXXXXNQELERKQA 221
            SS SP PY+F    R RKSG +EKVVERR RRMIKNRESAARSRARKQAYT             N EL+RKQA
Sbjct:  311 SSLSPSPYMFNGGVRGRKSGTVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAEVAKLKEENDELQRKQA 383          
BLAST of FC921918 vs. ExPASy Swiss-Prot
Match: AI5L7_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arabidopsis thaliana GN=ABF4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.744e-15
Identity = 46/74 (62.16%), Postives = 51/74 (68.92%), Query Frame = 3
Query:    3 AHVSSPSPVPYVFGRVRKSGA-LEKVVERRHRRMIKNRESAARSRARKQAYTXXXXXXXXXXXXXNQELERKQA 221
            A  +S SPVPYV  R R+S   LEKV+ERR RRMIKNRESAARSRARKQAYT             NQEL++KQA
Sbjct:  325 AENNSLSPVPYVLNRGRRSNTGLEKVIERRQRRMIKNRESAARSRARKQAYTLELEAEIEKLKKTNQELQKKQA 398          
BLAST of FC921918 vs. ExPASy Swiss-Prot
Match: TRAB1_ORYSJ (bZIP transcription factor TRAB1 OS=Oryza sativa subsp. japonica GN=TRAB1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13
Identity = 44/75 (58.67%), Postives = 49/75 (65.33%), Query Frame = 3
Query:    9 VSSP-SPVPYVFGRV----RKSGALEKVVERRHRRMIKNRESAARSRARKQAYTXXXXXXXXXXXXXNQELERKQ 218
            +SSP +PVPY F  V    R  G +EKVVERR RRMIKNRESAARSRARKQAYT             N EL++KQ
Sbjct:  202 LSSPMAPVPYPFEGVIRGRRSGGNVEKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEQNMELQKKQ 276          
The following BLAST results are available for this feature:
BLAST of FC921918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
AI5L6_ARATH3.179e-1765.71ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arab... [more]
AI5L4_ARATH5.995e-1666.18ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arab... [more]
AI5L5_ARATH1.023e-1564.38ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arab... [more]
AI5L7_ARATH1.744e-1562.16ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arab... [more]
TRAB1_ORYSJ3.637e-1358.67bZIP transcription factor TRAB1 OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionC06053H09T7 RindPdigS Citrus sinensis cDNA clone C06053H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921918 ID=FC921918; Name=FC921918; organism=Citrus sinensis; type=EST; length=265bp
CTGCTCATGTATCTTCACCATCACCAGTTCCTTATGTGTTTGGCCGGGTA
AGAAAAAGCGGTGCTCTGGAGAAAGTAGTTGAGAGGAGGCATAGAAGAAT
GATAAAAAACAGAGAGTCAGCTGCAAGATCACGGGCACGCAAGCAGGCCT
ATACATTGGAACTGGAAGCAGAGGTTGCTAAACTAAAGGAGTTGAACCAA
GAGTTGGAGAGGAAACAGGCAGAGAAAATAGAAATGGAAAAGAATAAGAT
TATCGAGAAAATGAA
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