FC921914

Overview
NameFC921914
Unique NameFC921914
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13544 contig Csv1_Contig13544:1..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921914 vs. ExPASy Swiss-Prot
Match: BAHD1_ARATH (BAHD acyltransferase At5g47980 OS=Arabidopsis thaliana GN=BAHD1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.911e-24
Identity = 77/213 (36.15%), Postives = 116/213 (54.46%), Query Frame = -2
Query:  267 SSASVPRPTRVEALTALFWKCARAASRSNLGYSRPSLSAHAINVRA-VADPPLPDNSVGN-SVAYLMAQASEKEIETLQDLVCSLRKAKAEFRR------NG--LKTLLENKSIFDIPESIKDKFEKDEIDFYTFSSIVNFPYYEAADFGWGKPVHLTFPNYSVSNLIM---LMDTNDGKGIEVLVTLSPEDMAFFERDQELLAFATTNPSVL 866
            +S SVP PTRVEA+ +L W+CAR AS +NL   R ++   ++++R  +    L  +++GN    + + +    EIE + ++V   RK K EF        NG    T L  K +  I   + +   K  ID YT SS     +YE  DFGWG+P  +   +  + + +M   L+D  DG+G+EV V +  +DMA F  DQELL++A+ NP VL
Sbjct:  234 ASKSVPSPTRVEAVMSLIWRCARNASHANLIVPRATMMTQSMDLRLRIPTNVLSPDAIGNLQGVFFLKRGPGSEIE-ISEVVAEFRKEKEEFNEMIKENVNGGHTNTTLGQKIMSGIANYMSEL--KPNIDTYTMSSWCRKAFYEV-DFGWGRPAWVGLGHQDIQDGVMYVLLVDAKDGEGVEVWVGIPEQDMAAFVCDQELLSYASLNPPVL 442          
BLAST of FC921914 vs. ExPASy Swiss-Prot
Match: DAT_CATRO (Deacetylvindoline O-acetyltransferase OS=Catharanthus roseus GN=DAT PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.851e-19
Identity = 69/206 (33.50%), Postives = 106/206 (51.46%), Query Frame = -2
Query:  285 VPRPTRVEALTALFWKCARAASRS-----NLGYSRPSLSAHAINVRAVADPPLPDNSVGNSVAYLMAQA-------SEKEIETLQDLVCSLRKAKAEFRRNGLKTLLENKSIFDIPESIK--DKFEKDEIDFYTFSSIVNFPYYEAADFGWGKPVHLTFPNYSVSNLIMLMD--TNDGKGIEVLVTLSPEDMAFFERDQELLAFAT 854
            + +PTRVE LTA   +CA  A +S     N G S P     AIN+R + +  LP NSVGN V+   ++        +EKE   L  ++  LRK K + +    + L     + +  +S+K  D     +ID Y   S   FP+Y+  DFGWGKP+ +      + N +++MD    D  GIE +V+   E M+ FE++++LL F +
Sbjct:  238 IEKPTRVEVLTAFLSRCATVAGKSAAKNNNCGQSLPFPVLQAINLRPILE--LPQNSVGNLVSIYFSRTIKENDYLNEKEYTKL--VINELRKEKQKIKNLSREKLTYVAQMEEFVKSLKEFDISNFLDIDAYLSDSWCRFPFYD-VDFGWGKPIWVCLFQPYIKNCVVMMDYPFGDDYGIEAIVSFEQEKMSAFEKNEQLLQFVS 438          
BLAST of FC921914 vs. ExPASy Swiss-Prot
Match: VINSY_RAUSE (Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13
Identity = 49/182 (26.92%), Postives = 86/182 (47.25%), Query Frame = -2
Query:  324 SSASVPRP-TRVEALTALFWKCARAASRSNLGYSRPSLSAHAINVRAVADPPLPDNSVGNSVAYLMAQASEKEIETLQDLVCSLRKAKAEFRRNGLKTLLENKSIFDIPESIKDKFEKDEIDFYTFSSIVNFPYYEAADFGWGKPVHLTFPNYSVSNLIMLMDTNDGKGIEVLVTLSPEDMA 866
            SSAS  +  +RV+ + A  WK     +R+  G     +   A+N+R+  +PPLP  ++GN    L A    +  +   DL+  LR +  +   +    LL+  +           +E +  +  +F+S     +Y+  DFGWGKP+      +   N  +LMDT  G G+E  + ++ ++MA
Sbjct:  234 SSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEWDKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCL---------YELEPQELLSFTSWCRLGFYDL-DFGWGKPLSACTTTFPKRNAALLMDTRSGDGVEAWLPMAEDEMA 405          
BLAST of FC921914 vs. ExPASy Swiss-Prot
Match: SALAT_PAPSO (Salutaridinol 7-O-acetyltransferase OS=Papaver somniferum GN=SALAT PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.164e-11
Identity = 65/203 (32.02%), Postives = 96/203 (47.29%), Query Frame = -2
Query:  315 RPTRVEALTALFWKCARAASRSNLGYSRPSLSAHAINVRAVADPPLPDNSVGN-SV---AYLMA-----------------QASEKEIETLQDLVCSLRKA--KAEFRRNGLKTLLENKSIFDIPESIKDKFEKDEIDFYTFSSIVNFPYYEAADFGWGKPVHLTF-PNYSVS-NLIMLMDTNDGKGIEVLVTLSPEDMAFFE 848
            R TRVE +T+L WK    ++ +        +  HA+N+R   DPPL D S GN SV   A+L A                   S+  +  L D +  +R    K +  +  L+ +++N +      SIK   + + I+F+  SS      YE  DFGWGKP+ +T  PN   + N   + DT  G+GIEV  +   +DMA FE
Sbjct:  269 RQTRVEVVTSLIWKSVMKSTPAGF----LPVVHHAVNLRKKMDPPLQDVSFGNLSVTVSAFLPATTTTTTNAVNKTINSTSSESQVVLHELHDFIAQMRSEIDKVKGDKGSLEKVIQNFA-SGHDASIKKINDVEVINFW-ISSWCRMGLYE-IDFGWGKPIWVTVDPNIKPNKNCFFMNDTKCGEGIEVWASFLEDDMAKFE 464          
The following BLAST results are available for this feature:
BLAST of FC921914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
BAHD1_ARATH1.911e-2436.15BAHD acyltransferase At5g47980 OS=Arabidopsis thal... [more]
DAT_CATRO1.851e-1933.50Deacetylvindoline O-acetyltransferase OS=Catharant... [more]
VINSY_RAUSE5.767e-1326.92Vinorine synthase OS=Rauvolfia serpentina GN=ACT P... [more]
SALAT_PAPSO3.164e-1132.02Salutaridinol 7-O-acetyltransferase OS=Papaver som... [more]
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Properties
Property NameValue
Genbank descriptionC06053H04T7 RindPdigS Citrus sinensis cDNA clone C06053H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921914 ID=FC921914; Name=FC921914; organism=Citrus sinensis; type=EST; length=870bp
TTTTTTTTTTTTTTTGTGAAAATGCTTTTACTGTTCTTTTCTTGAAACAG
TTGTAGACTTGATCTCATGTCCAATTTCACAAGCGTTTCTAATAAATATG
TGCAAGATAGGCTCAATAGTAGAAAGAACTACCATTTGAGGCATGCACAA
ATATCTAATTTCTTATTTTAATTAATAAACAATTACATAAACATAAGACT
TTAATATAGTCGAAGTGGCTAAATAAGCGGACGGGCATCTTATAGTTTGC
TCGTGTTCGTATATCCAAGTACTGATGGATTTGTAGTAGCAAATGCAAGC
AGTTCTTGGTCACGTTCGAAAAAGGCCATGTCTTCGGGGCTCAGAGTCAC
CAATACTTCTATTCCCTTACCATCGTTTGTGTCCATTAGCATAATCAAGT
TTGACACCGAATAATTTGGAAAAGTCAGGTGCACTGGCTTTCCCCATCCA
AAATCTGCTGCTTCATAATATGGAAAGTTAACAATACTGGAGAAAGTGTA
GAAATCGATCTCATCTTTTTCAAACTTGTCTTTAATTGACTCCGGAATAT
CGAATATACTCTTGTTTTCTAGCAAGGTTTTGAGACCGTTTCGTCTAAAT
TCTGCCTTTGCTTTCCTTAATGAACAAACCAAGTCTTGTAGTGTTTCAAT
TTCCTTTTCACTCGCCTGCGCCATCAGATACGCGACGGAGTTGCCCACAG
AGTTGTCAGGCAAGGGTGGGTCGGCCACGGCACGCACGTTTATCGCGTGT
GCTGACAAAGAAGGTCTTGAATACCCGAGGTTTGATCTTGATGCAGCCCT
TGCACACTTCCAAAAAAGTGCAGTCAGTGCCTCGACGCGTGTTGGTCTAG
GCACGCTTGCACTTGAAACT
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