EY662355

Overview
NameEY662355
Unique NameEY662355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY662355 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 6.547e-23
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 1 
Query:  397 AGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKFPSFLDWFGWCT 576
            +GD AVET+QG +LVY HAG NPFEVI Q+VKAVE++MQTF HREKKK PSFLDWFGWCT
Sbjct:  145 SGDKAVETSQGTHLVYVHAGTNPFEVIRQSVKAVERHMQTFHHREKKKLPSFLDWFGWCT 204
[Close]
BLAST of EY662355 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.322e-15
Identity = 34/60 (56.67%), Postives = 49/60 (81.67%), Query Frame = 1 
Query:  397 AGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKFPSFLDWFGWCT 576
            +GD  V+  +G +LV+  AG +PF+VI++AVKAVE+++QTF+HRE+KK P  L+WFGWCT
Sbjct:  145 SGDPTVDQFEGSHLVFVAAGSDPFDVITKAVKAVEQHLQTFSHRERKKMPDMLNWFGWCT 204
The following BLAST results are available for this feature:
BLAST of EY662355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
RFS2_ARATH6.547e-2378.33Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH1.322e-1556.67Probable galactinol--sucrose galactosyltransferase... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-043-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662355 ID=EY662355; Name=EY662355; organism=Citrus sinensis; type=EST; length=577bp
CCACGCGTCCGGGCAATGATAAAATGAGATAGAGATCTGCCTTGAGAGTG
GTGAGTAGATCGTGGCCAACAAAAAATTATATGGTCTAAGCTACATGCAT
CTGGCCTGCCATATCATTATCTAGTGCCTTATCTATGTTCATTCAATCGC
ATCCTGCCTGCGTTAATTGAGTCCCATTTCATCGGCCATTAATGAGGAGG
ACCAACAATCTTGAAATTATGGGGTGGAGCTGTCATTGATACGATCACAA
TGAGACTGGAGAAACAATTCAATGACCCTACCATCCAAGAGAGTCAAATT
AATGGAGTTTTTTGCATTTCGGGAAGAAAATAGGTAGAACAGATCGAGTT
CGAAAGAACCGATACGACTGTTTCTTTTGGTGTCTTGTTCGGTTTTGCAG
GAGATAATGCTGTTGAAACCAACCAAGGACTTTACCTTGTCTACACACAC
GCTGGGCCTAATCCTTTTGAAGTAATCAGCCAAGCTGTGAAGGCTGTAGA
AAAATACATGCAAACTTTCACTCATCGAGAGAAGAAGAAGTTTCCTTCTT
TTCTTGACTGGTTTGGCTGGTGCACCT
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