EY662350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY662350 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.948e-31 Identity = 74/134 (55.22%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 139 MKGGRSKADAVGTDSKLKSKGARAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGVNAAEENESDKSKSEVNDE 540 MKGG+SKA + D+KL K +A SAFFVFME+FRK +KE HPNNKSVA VGKA G+KWK ++ EKAPF+ +AEKRK +Y KN+Q YNK+ A G AAEE ESDKS+SEVND+ Sbjct: 1 MKGGKSKAKS---DNKLAVK-KQAADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAG--AAEEEESDKSRSEVNDD 128
BLAST of EY662350 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.340e-31 Identity = 70/138 (50.72%), Postives = 88/138 (63.77%), Query Frame = 1 Query: 139 MKGGRSKADAVGTDSKL----KSKGARAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGVNAAEENESDKSKSEVNDE 540 MKGG+SK ++ D KL K +A K SAFFVFMEEFRK F + HP NK+V+ VGKAAG KWK+MS+ EKAP+V ++EKRK +Y KNM+ YNK+ A+G +E ES+KS SEVNDE Sbjct: 1 MKGGKSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGPTGGDEEESEKSVSEVNDE 138
BLAST of EY662350 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.823e-29 Identity = 71/139 (51.08%), Postives = 91/139 (65.47%), Query Frame = 1 Query: 139 MKGGRSKADAVGTDSKL--KSKGARA---GKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGVNAAEENESDKSKSEVNDE 540 MKGG+SK ++ ++KL KGA A GK+ SAFFVFM +FR+Q+K+ HPNNKSVA VGKA GE+WKS+SE+EKAP+V+RA K+K +Y +Q YNK+L +E SDKSKSEVNDE Sbjct: 1 MKGGKSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKKLE---GKDDEEGSDKSKSEVNDE 136
BLAST of EY662350 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.633e-28 Identity = 73/144 (50.69%), Postives = 88/144 (61.11%), Query Frame = 1 Query: 139 MKGGRSKADAVGTDSKL--KSKGARAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGVNAA--------EENESDKSKSEVNDE 540 MKG +SK A D+KL KSKGA + SAFFVFMEEFRK+FKE +P NKSVA VGKAAG++WKS+SE +KAP+V +A K K +YNK + YNK + A +E ESDKSKSEVNDE Sbjct: 1 MKGAKSKG-AAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGESTAAKKAPAKEEEEEDEEESDKSKSEVNDE 143
BLAST of EY662350 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.219e-26 Identity = 71/148 (47.97%), Postives = 88/148 (59.46%), Query Frame = 1 Query: 139 MKGGRSKADAVGTDSKL--KSKGA-RAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYN-----------KQLADGVNAAEENESDKSKSEVNDE 540 MKG +SK A D+KL KSKGA + + SAFFVFM EFR++FK+ +P NKSVA VGKAAGE+WKS+SE EKAP+V +A K K +YNK + YN K A V +E ESDKSKSE+ND+ Sbjct: 1 MKGAKSKG-AAKADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGESAAAAAPKKAAAKEVEEEDEEESDKSKSEINDD 147
BLAST of EY662350 vs. ExPASy Swiss-Prot
Match: HMGB3_BOVIN (High mobility group protein B3 OS=Bos taurus GN=HMGB3 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 4.512e-12 Identity = 47/140 (33.57%), Postives = 69/140 (49.29%), Query Frame = 1 Query: 154 SKADAVGTDSKLKSKG-ARAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDY-NKQLADGVNAA---------EENESDKSKSEVNDE 540 +KAD V D ++K G A+ GK+ S FF+F EFR + K A+P S+ V K GE W ++S+ EK P++ +A K K Y K++ DY +K DG A EE+E D+ + E +E Sbjct: 64 AKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPP------SGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYKSKGKFDGAKGAAKVARKKVEEEDEEDEEEEEEEEE 196
BLAST of EY662350 vs. ExPASy Swiss-Prot
Match: HMGB3_CHICK (High mobility group protein B3 OS=Gallus gallus GN=HMGB3 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11 Identity = 47/141 (33.33%), Postives = 67/141 (47.52%), Query Frame = 1 Query: 154 SKADAVGTDSKLKSKG-ARAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDY-NKQLADGVNAA----------EENESDKSKSEVNDE 540 +KAD V D ++K G A+ GK+ SAFF+F EFR + K +P S+ V K GE W ++S+ EK P+ +A K K Y K++ DY +K DG A EE+E ++ E DE Sbjct: 64 AKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPP------SAFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAKGAATKAARKKVEEEDEEEEEDEEEEDE 197
BLAST of EY662350 vs. ExPASy Swiss-Prot
Match: HMGB3_MOUSE (High mobility group protein B3 OS=Mus musculus GN=Hmgb3 PE=2 SV=3) HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11 Identity = 45/139 (32.37%), Postives = 67/139 (48.20%), Query Frame = 1 Query: 154 SKADAVGTDSKLKSKG-ARAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDY-NKQLADGVNA--------AEENESDKSKSEVNDE 540 +KAD V D ++K G A+ GK+ S FF+F EFR + K +P S+ V K GE W ++S++EK P+V +A K K Y K++ DY +K DG EE E ++ + E +E Sbjct: 64 AKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPP------SGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEEEEEEEEEEEEEE 195 The following BLAST results are available for this feature:
BLAST of EY662350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY662350 ID=EY662350; Name=EY662350; organism=Citrus sinensis; type=EST; length=541bpback to top |