DN617399 | Citrus Genome Database

Overview


Name	DN617399
Unique Name	DN617399
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	622

Libraries


Library Name	Type
Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
DN617399_ssr100	microsatellite	DN617399_ssr100:100..120.	BLAST: Citrus ESTs to Prunus persica proteins V1
DN617399_ssr288	microsatellite	DN617399_ssr288:288..299.	BLAST: Citrus ESTs to Prunus persica proteins V1
DN617399_ssr332	microsatellite	DN617399_ssr332:332..349.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10148	contig	Csv1_Contig10148:151..772.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Properties


Property Name	Value
Genbank description	UCRCS11_01C12_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001C12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DN617399 ID=DN617399; Name=DN617399; organism=Citrus sinensis; type=EST; length=622bp
GTGAGTGAGTTGAAAAAAGGAAATTTTTGAATAGTTGATTTTAGTCCTCC
AATCAGATCAGAGAGGATGCAGCAATCTAACGGCGGAGACGCGAACGCCG
CGGCGGCGGCGGCGGCGGCGGTGTCCGGAGGAGCTGGAGGAGGATCTCAG
CCGACGCCACAGCAGCCGTACCACTGGGTCCCGCCGCACCAGCAGCAGTG
GATGGCTATGATGCAGTATCCGGCGGCGGCGATGGCCATGATGCAACAGC
AGCAGATGATGATGTATCCTCATCATTACATGCCGTACGGCGGCGGCGGT
CACCCGTATTATCAGAACGGCGGCGGCGTAAAGCAGCAGCAGCAGCAGCA
ACATGGATTGAGTAACGGAAAACAAAACGGATCTAATAATAATTTTACTA
ATGACGAGACTAAGACTATATGGATTGGTGATTTGTTTCATTGGATGGAC
GAAACTTTTCTTCATAATTGTTTCTCACATACTGGTCAGGTTGTAAATGT
TAAAGTTATCCGCAATAAGCAAACTGGTCAGTCAGAAGGGTATGGATTTG
TTGAGTTCTATTCACGTGCTGCAGCTGAGAAAGTTTTGCAGAGCTATAGT
GGTTCTCTAATGCCAAATACTG