DN617383

Overview
NameDN617383
Unique NameDN617383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7802 contig Csv1_Contig7802:338..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617383 vs. ExPASy Swiss-Prot
Match: STI1_SCHPO (Heat shock protein sti1 homolog OS=Schizosaccharomyces pombe GN=sti1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.500e-15
Identity = 52/158 (32.91%), Postives = 77/158 (48.73%), Query Frame = -3
Query:  113 KTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXDNPF---GSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNVKFK---GPTGGDDVEMQDEDAP 568
            K  ELKPDW+KG+SR GAA  GL D   A ++Y++GL  D NN                          NPF   GS  + P+   KL ++P T S L    F   ++ IQ+NP ++   L D R+M+ +G+L+ +      G    ++ E ++E AP
Sbjct:   61 KCTELKPDWAKGWSRKGAALHGLGDLDAARSAYEEGLKHDANN--AQLLNGLKSVEAAQTQAASGAGGFNPFAKLGSQLSDPKFMEKLASNPETASLLADSAFMAKLQKIQQNPGSIMAELNDPRMMKVIGMLMGIDINMNAGEGAAEEQEKKEEFAP 216          
BLAST of DN617383 vs. ExPASy Swiss-Prot
Match: STIP_SOYBN (Heat shock protein STI OS=Glycine max GN=STI PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.110e-14
Identity = 52/153 (33.99%), Postives = 74/153 (48.37%), Query Frame = -3
Query:  119 KKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXDNPFGSAFAGPEMWAKLTADPTTRSYLDQDD--FRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNVKFKGPTGGDDVEMQDED 571
            +KTV+LKPDW K YSRLGAAHLGL+ + +A    K   + +P+N                          +PF +AF+GP+MWA+    P T  ++       R         P  +    + QRVM A+GVLLNVK + P   ++    D+D
Sbjct:   59 QKTVDLKPDWPKAYSRLGAAHLGLRRHRDASPPTKPASNSNPDN------AALKSGLADAQAAASRPPPTSPFATAFSGPDMWAR---SPPTPPHVQPPGPRVRQDHAGHPEGPQQVQPAFEYQRVMHAIGVLLNVKIQTPNHDENDHDADDD 202          
BLAST of DN617383 vs. ExPASy Swiss-Prot
Match: STIP1_MOUSE (Stress-induced-phosphoprotein 1 OS=Mus musculus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.230e-14
Identity = 48/133 (36.09%), Postives = 66/133 (49.62%), Query Frame = -3
Query:  170 KTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXDNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNV 568
            KTV+LKPDW KGYSR  AA   L  + EA  +Y++GL  + NN                         +  F + F  P ++ KL  DP TRS L    +R +++ +Q  P++L   L+D RVM  L VLL V
Sbjct:   63 KTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN----------LQLKEGLQNMEARLAERKFMNPFNLPNLYQKLENDPRTRSLLSDPTYRELIEQLQNKPSDLGTKLQDPRVMTTLSVLLGV 185          
BLAST of DN617383 vs. ExPASy Swiss-Prot
Match: STIP1_MACFA (Stress-induced-phosphoprotein 1 OS=Macaca fascicularis GN=STIP1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.219e-14
Identity = 46/133 (34.59%), Postives = 67/133 (50.38%), Query Frame = -3
Query:  170 KTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXDNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNV 568
            KTVELKPDW KGYSR  AA   L  + EA  +Y++GL  + NN                         +  F + F  P ++ KL +DP TR+ L    +R +++ ++  P++L   L+D R+M  L VLL V
Sbjct:   63 KTVELKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN----------PQLKEGLQNMEARLAERKFMNPFNMPNLYQKLESDPRTRTLLSDPTYRELIEQLRNKPSDLGTKLQDPRIMTTLSVLLGV 185          
BLAST of DN617383 vs. ExPASy Swiss-Prot
Match: STIP1_RAT (Stress-induced-phosphoprotein 1 OS=Rattus norvegicus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.196e-14
Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = -3
Query:  170 KTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXDNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNV 568
            KTV+LKPDW KGYSR  AA   L  + EA  +Y++GL  + NN                         +  F + F  P ++ KL  DP TR+ L    +R +++ +Q  P++L   L+D RVM  L VLL V
Sbjct:   63 KTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN----------LQLKEGLQNMEARLAERKFMNPFNLPNLYQKLENDPRTRTLLSDPTYRELIEQLQNKPSDLGTKLQDPRVMTTLSVLLGV 185          
BLAST of DN617383 vs. ExPASy Swiss-Prot
Match: STIP1_HUMAN (Stress-induced-phosphoprotein 1 OS=Homo sapiens GN=STIP1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.398e-14
Identity = 46/133 (34.59%), Postives = 66/133 (49.62%), Query Frame = -3
Query:  170 KTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXDNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNV 568
            KTV+LKPDW KGYSR  AA   L  + EA  +Y++GL  + NN                          NPF      P ++ KL +DP TR+ L    +R +++ ++  P++L   L+D R+M  L VLL V
Sbjct:   63 KTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEARLAERKFM------NPFNM----PNLYQKLESDPRTRTLLSDPTYRELIEQLRNKPSDLGTKLQDPRIMTTLSVLLGV 185          
BLAST of DN617383 vs. ExPASy Swiss-Prot
Match: STIP1_BOVIN (Stress-induced-phosphoprotein 1 OS=Bos taurus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.571e-13
Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = -3
Query:  170 KTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXDNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNV 568
            KTV+LKPDW KGYSR  AA   L  + EA  +Y++GL  + NN                         +  F + F  P ++ KL +DP T++ L    +R +++ ++  P++L   L+D R+M  L VLL V
Sbjct:   63 KTVDLKPDWGKGYSRKAAALEFLNRFEEAKQTYEEGLKHEANN----------PQLKEGLQNMEARLAERKFMNPFNMPNLYQKLESDPRTKTLLADPTYRELIEQLRNKPSDLGTKLQDPRIMTTLSVLLGV 185          
BLAST of DN617383 vs. ExPASy Swiss-Prot
Match: STIP1_CRIGR (Stress-induced-phosphoprotein 1 OS=Cricetulus griseus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.664e-13
Identity = 44/133 (33.08%), Postives = 66/133 (49.62%), Query Frame = -3
Query:  170 KTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXDNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNV 568
            KTV+LKPDW KGYSR  AA   L  + EA  +Y++GL  + NN                         +  F + F  P ++ KL  DP TR+ L    +R +++ ++  P++L   ++D R+M  L VLL V
Sbjct:   63 KTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN----------LQLKEGLQNMEARLAERKFMNPFNLPNLYQKLENDPRTRTLLSDPTYRELIEQLRNKPSDLGTKIQDPRIMTTLSVLLGV 185          
BLAST of DN617383 vs. ExPASy Swiss-Prot
Match: STIP1_DICDI (Protein STIP1 homolog OS=Dictyostelium discoideum GN=sti1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11
Identity = 48/140 (34.29%), Postives = 64/140 (45.71%), Query Frame = -3
Query:  155 KKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXDNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNVKF-KGP 571
            KK +ELKPDWSKGY R   A   L  + EA  S + GL IDP N+                         +   + F+   +  KL  +P T  +  Q DF  +M  I +NP+  + Y+ DQR    LGVLL V   +GP
Sbjct:   66 KKAIELKPDWSKGYLRETNALYKLGRFEEAEKSAEAGLKIDPTNQ-----QLEDALEDAQYATTGAKDPASAMANLFSAQNL-TKLRFNPKTAPFFQQPDFVAIMDQISKNPSLFSQYIADQRFSTCLGVLLGVDINQGP 199          
The following BLAST results are available for this feature:
BLAST of DN617383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
STI1_SCHPO8.500e-1532.91Heat shock protein sti1 homolog OS=Schizosaccharom... [more]
STIP_SOYBN1.110e-1433.99Heat shock protein STI OS=Glycine max GN=STI PE=2 ... [more]
STIP1_MOUSE3.230e-1436.09Stress-induced-phosphoprotein 1 OS=Mus musculus GN... [more]
STIP1_MACFA4.219e-1434.59Stress-induced-phosphoprotein 1 OS=Macaca fascicul... [more]
STIP1_RAT7.196e-1435.34Stress-induced-phosphoprotein 1 OS=Rattus norvegic... [more]
STIP1_HUMAN9.398e-1434.59Stress-induced-phosphoprotein 1 OS=Homo sapiens GN... [more]
STIP1_BOVIN3.571e-1333.08Stress-induced-phosphoprotein 1 OS=Bos taurus GN=S... [more]
STIP1_CRIGR4.664e-1333.08Stress-induced-phosphoprotein 1 OS=Cricetulus gris... [more]
STIP1_DICDI1.149e-1134.29Protein STIP1 homolog OS=Dictyostelium discoideum ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01C04_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617383 ID=DN617383; Name=DN617383; organism=Citrus sinensis; type=EST; length=573bp
TTTTTTTTTTTTTTTTCTTAGCTTCCTTCTCCTCCTCCGTCAGCTCCATT
GGCTCAGGCTCGGGCTCAGACTCCGGCTTCCTCGTCTCCTCCTTAGACGT
CTCCGGTCCTTTTGGGGCATCTTCGTCCTGCATTTCCACGTCATCACCAC
CAGTGGGCCCCTTAAACTTCACATTTAATAAAACCCCCAAAGCCTGCATC
ACCCGCTGGTCCTTCAAGTATAAGTTTAAGTTGTTAGGATTTCTCTGAAT
ATCCTTCATCATATTACGAAAATCATCTTGGTCGAGATAACTTCTCGTAG
TCGGATCCGCCGTTAATTTTGCCCACATCTCAGGTCCGGCAAAAGCAGAA
CCAAATGGATTATCGGCCGGCGGGGAACGAGATCTGAACGACGCGGAGGC
CGCCGCTTTAGCATCGGCCAAGCCGGATTTGAGGGCTTCATTGTTAGGAT
CGATATCAAGTCCTTTCTTGTAGGAGTTAACAGCTTCGATATAGTCCTGT
AATCCGAGGTGAGCAGCGCCAAGTCGGCTGTAGCCTTTGGACCAGTCCGG
CTTAAGCTCGACGGTCTTCTTGG
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