DN617378

Overview
NameDN617378
Unique NameDN617378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4520 contig Csv1_Contig4520:597..1191. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617378 vs. ExPASy Swiss-Prot
Match: NOSIP_DANRE (Nitric oxide synthase-interacting protein OS=Danio rerio GN=nosip PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.508e-20
Identity = 58/170 (34.12%), Postives = 88/170 (51.76%), Query Frame = 3
Query:  114 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKKDIQRKLVAHAAXXXXXXXXXXXRLMLQKARELDAFDQQNHGAV-----PQYNDRNHSQ-DKNGFHGAHSVKVTSYEEEALRTMKAFWLPSATP 593
            RH KN    A +TY EKRK     GYGTQ  RLGKD+IK FD C L L+P  DP+  + G++Y KE IL+ +L QK +I +K+ A+                 ++    + F Q+ +  V     P  + ++  + ++NG   + S   +S E  +   + +FW+PS TP
Sbjct:    3 RHGKNCTAGAVYTYHEKRKDTAASGYGTQSVRLGKDAIKDFDCCSLSLQPCRDPVLTEDGYLYEKEAILQYILHQKTEIAKKMKAYEKQKQALKSEGQLESKSEERERAEKFKQRENNIVSKPINPFTSGKSKDEGNQNGSTSSSSTDTSSGESSSSSALPSFWIPSLTP 172          
BLAST of DN617378 vs. ExPASy Swiss-Prot
Match: NOSIP_XENLA (Nitric oxide synthase-interacting protein OS=Xenopus laevis GN=nosip PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.663e-19
Identity = 58/164 (35.37%), Postives = 81/164 (49.39%), Query Frame = 3
Query:  114 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKKDIQRKLVAHAAXXXXXXXXXXXRLMLQKARELDAFDQQNHGAVPQYNDRNHSQDKNGFHGAHSVKVTSYEEEALRTMKAFWLPSATP 593
            RH KN    A +TY EK+K     GYGTQ  RL KD++K FD CCL L+P  DP+    G+IY KE ILE +L QKK+I R++ A+                  K  ++ AF  +    V +  +    +  +G   A         EE  + + +FW+PS TP
Sbjct:    3 RHGKNCTAGAVYTYYEKKKDTVASGYGTQTVRLSKDAVKDFDCCCLSLQPCKDPVVTSDGYIYEKESILEYILHQKKEIARQMKAYEKQKNSKKAEMEELNKAAKESKMKAFLDKEMTIVSKPLNPFTRKSDSGIDAAEPSCSQQSSEEKNKQLPSFWIPSLTP 166          
BLAST of DN617378 vs. ExPASy Swiss-Prot
Match: NOSIP_XENTR (Nitric oxide synthase-interacting protein OS=Xenopus tropicalis GN=nosip PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.039e-18
Identity = 58/164 (35.37%), Postives = 81/164 (49.39%), Query Frame = 3
Query:  114 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKKDIQRKLVAHAAXXXXXXXXXXXRLMLQKARELDAFDQQNHGAVPQYNDRNHSQDKNGFHGAHSVKVTSYEEEALRTMKAFWLPSATP 593
            RH KN    A +TY EK+K     GYGTQ  RL KD++K FD CCL L+P  DP+    G+IY KE ILE +L QKK+I R++ A+                  K  ++ AF  +    V +  +    +  +G   A         EE  + + +FW+PS TP
Sbjct:    3 RHGKNCTAGAVYTYYEKKKDTAASGYGTQTVRLSKDAVKDFDCCCLSLQPCKDPVVTSDGYIYEKEAILEYILHQKKEIARQMKAYDKQKNAKKAEMDELNKAAKESQMKAFLDKEMTIVSKPLNPFTRKSDSGADTAEPSGSQQSSEEKGKQLPSFWIPSLTP 166          
BLAST of DN617378 vs. ExPASy Swiss-Prot
Match: NOSIP_DICDI (Nitric oxide synthase-interacting protein homolog OS=Dictyostelium discoideum GN=nosip PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17
Identity = 46/80 (57.50%), Postives = 55/80 (68.75%), Query Frame = 3
Query:  114 RHSKNN--NDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKKDIQRK 347
            RHSK++  N   F  Y E++ L YGT  ERLGKDSIK FD+C LCL   I P+ C KGH+YCKECIL  L+ QKK I+ K
Sbjct:    3 RHSKHSCSNSGKFSNY-ERQLLKYGTTTERLGKDSIKNFDSCSLCLNDVIMPVICNKGHLYCKECILTSLIDQKKLIKIK 81          
BLAST of DN617378 vs. ExPASy Swiss-Prot
Match: NOSIP_MACFA (Nitric oxide synthase-interacting protein OS=Macaca fascicularis GN=NOSIP PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.395e-15
Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 3
Query:  114 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKKDIQRKLVAH 359
            RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+P  DP+    G++Y +E ILE +L QKK+I R++ A+
Sbjct:    3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKKEIARQMKAY 88          
BLAST of DN617378 vs. ExPASy Swiss-Prot
Match: NOSIP_HUMAN (Nitric oxide synthase-interacting protein OS=Homo sapiens GN=NOSIP PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.395e-15
Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 3
Query:  114 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKKDIQRKLVAH 359
            RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+P  DP+    G++Y +E ILE +L QKK+I R++ A+
Sbjct:    3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKKEIARQMKAY 88          
BLAST of DN617378 vs. ExPASy Swiss-Prot
Match: NOSIP_BOVIN (Nitric oxide synthase-interacting protein OS=Bos taurus GN=NOSIP PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.395e-15
Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 3
Query:  114 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKKDIQRKLVAH 359
            RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+P  DP+    G++Y +E ILE +L QKK+I R++ A+
Sbjct:    3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKKEIARQMKAY 88          
BLAST of DN617378 vs. ExPASy Swiss-Prot
Match: NOSIP_MOUSE (Nitric oxide synthase-interacting protein OS=Mus musculus GN=Nosip PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.968e-15
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 3
Query:  114 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKKDIQRKLVAH 359
            RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+P  DP+    G++Y +E ILE +L QK++I R++ A+
Sbjct:    3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKREIARQVKAY 88          
BLAST of DN617378 vs. ExPASy Swiss-Prot
Match: NOSIP_DROME (Nitric oxide synthase-interacting protein homolog OS=Drosophila melanogaster GN=CG6179 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13
Identity = 46/173 (26.59%), Postives = 82/173 (47.40%), Query Frame = 3
Query:  114 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKKDIQRKLVAHAAXXXXXXXXXXXRLMLQKARELDAF-DQQNHGAVPQYNDRNHSQDKNGFHGAHSVKVTSYEEEALRTM--------KAFWLPSATP 593
            RH++N    A +TY+EK++     GYGT  +RLGKDS+K FD C L L+P   P+  + G+++ KE IL+ ++++K +  R+L  +                 ++   ++ F + +     P ++    S+  +    A +    S    ++  M         +FWLPS  P
Sbjct:    3 RHARNCTAGAVYTYNEKKRDAAESGYGTNAQRLGKDSVKSFDCCSLTLQPCRRPVITKDGYLFDKEAILQYIVTKKNEYSRRLKEYERLRRAEEDKLSQEANSKQQARMERFVNAEKPAMTPAHSSAAASEKPSTSSAAAAASSESSSASSISNMTNGHEKKLPSFWLPSECP 175          
BLAST of DN617378 vs. ExPASy Swiss-Prot
Match: NOSIP_CAEEL (Nitric oxide synthase-interacting protein homolog OS=Caenorhabditis elegans GN=R05G6.4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.210e-12
Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  114 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKKDIQRKL 350
            RH KN+   + +TY E+R+     GYGT   RLG DSIK F  C L L+P  +P+    G+I+ +E ILE +L+QKK   +KL
Sbjct:    3 RHGKNSTAASVYTYHERRRDAKASGYGTLHARLGADSIKEFHCCSLTLQPCRNPVISPTGYIFDREAILENILAQKKAYAKKL 85          
The following BLAST results are available for this feature:
BLAST of DN617378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
NOSIP_DANRE5.508e-2034.12Nitric oxide synthase-interacting protein OS=Danio... [more]
NOSIP_XENLA4.663e-1935.37Nitric oxide synthase-interacting protein OS=Xenop... [more]
NOSIP_XENTR1.039e-1835.37Nitric oxide synthase-interacting protein OS=Xenop... [more]
NOSIP_DICDI4.364e-1757.50Nitric oxide synthase-interacting protein homolog ... [more]
NOSIP_MACFA2.395e-1547.67Nitric oxide synthase-interacting protein OS=Macac... [more]
NOSIP_HUMAN2.395e-1547.67Nitric oxide synthase-interacting protein OS=Homo ... [more]
NOSIP_BOVIN2.395e-1547.67Nitric oxide synthase-interacting protein OS=Bos t... [more]
NOSIP_MOUSE6.968e-1546.51Nitric oxide synthase-interacting protein OS=Mus m... [more]
NOSIP_DROME3.823e-1326.59Nitric oxide synthase-interacting protein homolog ... [more]
NOSIP_CAEEL7.210e-1244.58Nitric oxide synthase-interacting protein homolog ... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01C01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617378 ID=DN617378; Name=DN617378; organism=Citrus sinensis; type=EST; length=595bp
TTTCTTTCGCTATTTCTAGGGTTTCACGTCTGTGGTCTAGAGCAATCAAT
TTGGGTTTTTCTTTTTCTTTTTTCTTTTTCCCAATCAGACAACAAAATCA
AACGATGCCGCAGAGGCACTCAAAGAACAATAACGATCTCGCCTTTTTCA
CGTACGATGAGAAGCGTAAGCTCGGATATGGCACGCAGAAGGAGCGGCTC
GGCAAGGACTCGATAAAGCCCTTTGATGCATGTTGCCTTTGCTTGAAGCC
GTTTATCGATCCCTTGTGTTGCCAGAAAGGCCACATCTACTGTAAAGAGT
GCATTCTCGAGTGCCTTCTCTCCCAGAAAAAAGACATTCAAAGAAAGCTA
GTTGCCCATGCTGCTCAGCAGAAGCAGGAGAAGGAAGAGGAAGAAGAGAG
GTTGATGTTGCAGAAAGCCAGGGAGCTTGATGCATTTGATCAGCAAAACC
ATGGTGCTGTACCACAGTACAATGATAGAAATCATAGCCAAGACAAGAAT
GGCTTCCATGGGGCACATAGTGTGAAAGTCACATCTTACGAAGAGGAAGC
CCTCCGAACAATGAAAGCATTTTGGCTGCCTTCTGCTACCCCTGA
back to top