DN617306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617306 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.738e-21 Identity = 56/120 (46.67%), Postives = 76/120 (63.33%), Query Frame = -3 Query: 162 QRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEIGQFDFQTSSMFLVPMVSLMILNMAALLFGFIRIIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRI 521 QR+WM+K +T++ YG +DTI KLLGL K SF T KV D ++ KRYE +F +SS V + ++ +LN L+ G +I+A G W+ QV+L I+I N I E M VRKDKGRI Sbjct: 589 QRMWMVKRITSYLYGFIDTIRKLLGLSKMSFEITAKVSDGDEAKRYEQEILEFGSSSPEFVIIATVALLNFVCLVAGLSKIMA-GVWNVFLPQVILCGLIVITNIPIYEAMFVRKDKGRI 707
BLAST of DN617306 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 1.736e-18 Identity = 53/126 (42.06%), Postives = 77/126 (61.11%), Query Frame = -3 Query: 153 QRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEIGQFDFQTSSMFLVPMVSLMILNMAALLFGFIRIIA-VGN--WDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISTS 521 QR+WM+KS+T++ YG +DTI K +G+ K SF T KV ++ KRYE +F +SS V + ++ +LN L+ G +I+A V N W+ Q +L I+IIN I E M +RKD GRI T+ Sbjct: 594 QRMWMVKSITSYLYGFIDTIRKCVGMSKMSFEVTAKVSGHDEAKRYEQEILEFGSSSPEYVIIATVALLNFVCLVGGLSQIMAGVWNMPWNVFLPQAILCGMIVIINMPIYEAMFLRKDNGRIPTA 719
BLAST of DN617306 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.053e-15 Identity = 39/126 (30.95%), Postives = 76/126 (60.32%), Query Frame = -3 Query: 153 QRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEIGQFDFQTSSMFLVPMVSLMILNMAALLFGFIRII---AVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISTS 521 QR+W+I+ +T++ ++DT ++LG+ ++ F T KV D + ++RY+ G +F + S V + ++ +LN+A ++ G R++ G + LF Q +L + I+ IN + E + +R+DKG + S Sbjct: 601 QRMWLIRRITSYLLATIDTFRRILGISESGFNLTVKVTDLQALERYKKGMMEFGSFSAMFVILTTVALLNLACMVLGISRVLLQEGPGGLETLFLQAVLCVLIVAINSPVYEALFLRRDKGSLPAS 726
BLAST of DN617306 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.288e-13 Identity = 44/122 (36.07%), Postives = 73/122 (59.84%), Query Frame = -3 Query: 159 QRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDK-EQVKRYEIGQFDFQTSSMFLVPMVSLMILNMAALLFGFIRIIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRIS 521 QR+ MIK +++ F+G ++ ILK L L F T+K D EQ KRYE FDF TSS +P+ ++ I+N+ A ++G I+ G +L+ +++L + ++ I M++RKD G++S Sbjct: 590 QRMLMIKGLSSFFFGFIEFILKTLNLSTPKFNVTSKANDDDEQRKRYEQEIFDFGTSSSMFLPLTTVAIVNLLAFVWGLYGILFCGG--ELYLELMLVSFAVVNCLPIYGAMVLRKDDGKLS 709
BLAST of DN617306 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.429e-12 Identity = 36/125 (28.80%), Postives = 76/125 (60.80%), Query Frame = -3 Query: 153 QRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEIGQFDFQTSSMFLVPMVSLMILNMAALLFGFIRIIA--VGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISTS 521 QR+W+ + ++ +G MDTI KLLG+ +++F+ T KV ++E +RY+ +F S + + +L +LN+ R+++ G+ + Q +++ +++IN+ + +GM++R+DKG++ S Sbjct: 586 QRMWLYRRTSSFLFGFMDTIKKLLGVSESAFVITAKVAEEEAAERYKEEVMEFGVESPMFLVLGTLGMLNLFCFAAAVARLVSGDGGDLKTMGMQFVITGVLVVINWPLYKGMLLRQDKGKMPMS 710
BLAST of DN617306 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 7.066e-12 Identity = 39/121 (32.23%), Postives = 70/121 (57.85%), Query Frame = -3 Query: 162 QRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLD-KEQVKRYEIGQFDFQTSSMFLVPMVSLMILNMAALLFGFIRIIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRI 521 QR+W I+ ++H +G ++ LK L L F T+K D +EQ KRYE F+F SS +P+ ++ I+N+ A ++G + A G + L +++L+ + ++ I E M++R D G++ Sbjct: 609 QRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRYEKEIFEFGPSSSMFLPLTTVAIVNLLAFVWGLYGLFAWG--EGLVLELMLASFAVVNCLPIYEAMVLRIDDGKL 727
BLAST of DN617306 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.056e-11 Identity = 39/121 (32.23%), Postives = 68/121 (56.20%), Query Frame = -3 Query: 162 QRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLD-KEQVKRYEIGQFDFQTSSMFLVPMVSLMILNMAALLFGFIRIIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRI 521 QR+WM++ +++ F+G + LK L L + T+K D EQ+KRYE FDF SS +P+ ++ I+N+ A + G I G L +++L+ + ++ I E M++R D G++ Sbjct: 580 QRMWMVRGLSSFFFGFTEFTLKTLNLSTQGYNVTSKSNDDNEQMKRYEQEIFDFGPSSSMFLPITTVAIMNLLAFMRGLYGIFTWGEGPVL--ELMLASFAVVNCLPIYEAMVLRIDDGKL 698 The following BLAST results are available for this feature:
BLAST of DN617306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617306 ID=DN617306; Name=DN617306; organism=Citrus sinensis; type=EST; length=523bpback to top |