DN135255

Overview
NameDN135255
Unique NameDN135255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:132..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135255 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 1
Query:   76 MSDTCGNCDYADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 273
            MSDTCGNCD AD++QCVKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DN135255 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.448e-17
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 1
Query:   85 TCGNCDYADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCGS 276
            TCGNCD  D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DN135255 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 1
Query:   76 MSDTCGNCDYADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 270
            MSD CGNCD AD SQCVKKG+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DN135255 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.149e-15
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   76 MSDTCGNCDYADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 270
            MS  C NCD +D SQC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DN135255 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.149e-15
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 1
Query:   76 MSDTCGNCDYADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 273
            MS  C NCD AD +QCVKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DN135255 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.957e-14
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   76 MSDTCGNCDYADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 273
            MSD CGNCD AD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135255 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.957e-14
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   76 MSDTCGNCDYADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 273
            MSD CGNCD AD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135255 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.124e-12
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   76 MSDTCGNCDYADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 273
            MSD CGNCD AD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DN135255 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.187e-11
Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   76 MSDTCGNCDYADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 273
            MSD CG+CD AD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DN135255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA3.330e-2268.18Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC1.448e-1759.38Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE1.891e-1766.15Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV5.149e-1556.92Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO5.149e-1557.58Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ1.957e-1453.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.957e-1453.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ3.124e-1248.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI1.187e-1146.97Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionwca08f06 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08f06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135255 ID=DN135255; Name=DN135255; organism=Citrus sinensis; type=EST; length=582bp
AAAGCAAAGCAAGTTTCGTACAATAAAGAGCCCTCTATTTCCAGTTTTAA
GTTCTAAGTTCTAAGCTCAATCAACATGTCGGACACCTGCGGCAACTGCG
ACTACGCTGACAGGAGCCAGTGTGTGAAGAAGGGAAGCAGCTATGCTGCT
GACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGTTGTTGTCATGGA
CGTTCAGGCTGCTGAGGCTGAAGGTAACTGCAAGTGCGGCCCCACCTGCG
CTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCAAACACATGCAGC
AAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGTGGGGGTTAAGAATA
ATGTAAGGGTGATTAAAAAAAAAAAGAAAAATTCTCTACTTCGTTTTTAT
GATGGTCTACTACTAGTGTGTGGAGTGATGTGCGTGTTGTGTCACCCATC
ACTCGTAATGTTTTGTGTTTCCTTCTTCATAATCATGTAATATATGGCCA
TGGCCATGACCGTGGCCTTGTGTGGTTTAATTTTAATGTATTATTGTTAG
TCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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