DN135212

Overview
NameDN135212
Unique NameDN135212
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:120..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135212 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.428e-22
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 1
Query:   88 MSDTCGNCDCADRSQ*VKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 285
            MSDTCGNCDCAD++Q VKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DN135212 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.360e-17
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 1
Query:   97 TCGNCDCADRSQ*VKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCGS 288
            TCGNCDC D+SQ VKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DN135212 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 1
Query:   88 MSDTCGNCDCADRSQ*VKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 282
            MSD CGNCDCAD SQ VKKG+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DN135212 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.394e-15
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   88 MSDTCGNCDCADRSQ*VKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 282
            MS  C NCDC+D SQ  KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DN135212 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.394e-15
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 1
Query:   88 MSDTCGNCDCADRSQ*VKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 285
            MS  C NCDCAD +Q VKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DN135212 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.190e-14
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   88 MSDTCGNCDCADRSQ*VKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 285
            MSD CGNCDCAD+SQ VKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135212 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.190e-14
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   88 MSDTCGNCDCADRSQ*VKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 285
            MSD CGNCDCAD+SQ VKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135212 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.092e-12
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   88 MSDTCGNCDCADRSQ*VKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 285
            MSD CGNCDCAD+SQ VKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DN135212 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11
Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   88 MSDTCGNCDCADRSQ*VKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 285
            MSD CG+CDCAD+SQ VKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DN135212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA5.428e-2268.18Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC2.360e-1759.38Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE3.082e-1766.15Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV8.394e-1556.92Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO8.394e-1557.58Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ3.190e-1453.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI3.190e-1453.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ5.092e-1248.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI1.935e-1146.97Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionwca07h08 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07h08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135212 ID=DN135212; Name=DN135212; organism=Citrus sinensis; type=EST; length=568bp
GGGGATCACAGCAAAGNNNNGCAAGTTTCGTACAATAAAGAGCCCTCTAT
TTCCAGTTTTAAGTTCTAAGTTCTAAGCTCAATCAACATGTCGGACACCT
GCGGCAACTGCGACTGCGCTGACAGGAGCCAGTGAGTGAAGAAGGGAAGC
AGCTATGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGT
TGTTGTCATGGACGTTCAGGCTGCTGAGGCTGAAGGTAACTGCAAGTGCG
GCCCCACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCA
AACACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGTGG
GGGTTGAGAATAATGTAAGGGTGATTAAAAAAAAAAAAAAAAATTCTCTG
CTTCGTTTTTATGATGGTCTACTACTAGTGTGTGGAGTGATGTGCGTGTT
GTGTCACCCATCACTCGTAATGTTTTGTGTTCCCTTCTTCATAATCATGT
AATATATGGCCATGGCCATGACCGTGGCCTTGTGTGGATAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA
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