DN135173

Overview
NameDN135173
Unique NameDN135173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2079 contig Csv1_Contig2079:301..963. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: P2_ARATH (Probable NADP-dependent oxidoreductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2)

HSP 1 Score: 354.755 bits (909), Expect = 2.384e-97
Identity = 170/221 (76.92%), Postives = 190/221 (85.97%), Query Frame = 1
Query:    4 GVAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTA-PQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP 663
            GV++  +S HP+Y K DL+WG  GWEEYS++T    +  KIQHTDVPLSYYTG+LGMPG+TAYAG YEVCSPKKGE VYVSAASGAVGQLVGQFAK+ GCYVVGSAGSKEKVDLLK KFGFDDAFNYK+E DL AALKRCFP+GID+YFENVGGKMLDAVLLNM   GRIAVCGMISQYNLE  EGVHNL  +I KRIR++GF+  D+Y  YPKFLELV+P
Sbjct:   80 GVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLP 300          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: P1_ARATH (Probable NADP-dependent oxidoreductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 4.208e-94
Identity = 165/221 (74.66%), Postives = 185/221 (83.71%), Query Frame = 1
Query:    4 GVAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTA-PQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP 663
            GV++  +S HP+Y K DL+WG   WEEYS++T       KIQHTDVPLSYYTG+LGMPG+TAYAG YEVCSPK+GE VYVSAASGAVGQLVGQ AK+ GCYVVGSAGSKEKVDLLK KFGFDDAFNYK+E DL AALKRCFP GIDIYFENVGGKMLDAVL+NM + GRIAVCGMISQYNLE  EGVHNL  +I KRIR++GF+  D+Y  Y KFLE V+P
Sbjct:   82 GVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLP 302          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: PTGR1_RABIT (Prostaglandin reductase 1 OS=Oryctolagus cuniculus GN=PTGR1 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.415e-43
Identity = 96/206 (46.60%), Postives = 131/206 (63.59%), Query Frame = 1
Query:    7 VAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQL--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNL--EKPEGVHNLEQLIGKRIRLEGFL 612
            VA+  +S +P +    LV   +GW  +S+    QL  L+      +PLS   G +GMPG+TAY GL E+C  K G+ V V+AA+GAVG +VGQ AK+ GC VVG+AGS+EKVD LK K GFD AFNYK    L+  LK+  P G D YF+NVGG+  + V+  M+  GR+A+CG IS YN   + P G  + E ++ + IR+EGF+
Sbjct:   68 VARVVESKNPAWPVGTLVLAHSGWASHSISDGQQLEKLLTEWPDTLPLSLALGTVGMPGITAYFGLLEICGAKSGDTVLVNAAAGAVGAVVGQIAKIKGCRVVGAAGSEEKVDYLK-KIGFDFAFNYKTVKSLEETLKKAAPDGYDCYFDNVGGEFSNTVIRQMKKFGRVAICGAISMYNSTGQLPPG-PSPESVLYQEIRMEGFI 271          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: YKM8_SCHPO (Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe GN=SPAPB24D3.08c PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 9.837e-43
Identity = 101/213 (47.42%), Postives = 128/213 (60.09%), Query Frame = 1
Query:    7 VAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQL--LIKIQHT-DVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLY 636
            VAK   ST   Y     V   +GWEEY+ V+   L  L  I +   +PL  + G LGMP  TAY GL  +  PK GE +Y+SAASGAVGQ+ GQ AK  G +VVGS GS EK  +  +  G+D  FNYK+E    A  + C P+GIDIYFENVGG+ +DAVL NM L+GRI  CG ISQYN   P  V NL  ++ K + ++GF+  +    Y
Sbjct:   86 VAKVVKSTLDQYKPGMDVVFVSGWEEYTFVSKQALGFLQPINNPYKLPLIDFVGSLGMPSQTAYCGLKHIGKPKAGETIYISAASGAVGQMAGQLAKAMGLHVVGSVGSDEKFKICLDS-GYDSVFNYKKESPFKALPRLC-PKGIDIYFENVGGETMDAVLENMNLQGRIIFCGAISQYNNPNPYRVKNLGMVLVKSLTIQGFIVANILPQY 296          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: YFMJ_BACSU (Putative NADP-dependent oxidoreductase yfmJ OS=Bacillus subtilis GN=yfmJ PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.862e-42
Identity = 96/211 (45.50%), Postives = 125/211 (59.24%), Query Frame = 1
Query:    1 GGVAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPE---GVHNLEQLIGKRIRLEGFLAGDY 624
            GGV     S   +  K D+V G+  W+E+S V+   L  KI  +  P S Y GILGM G+TAY GL ++  PK+GE V VS A+GAVG  VGQ AK+ G  VVG AGS EK+D LK +  FD+A NYK   D+  AL+   P G+D+YF+NVGG + DAV+  +    RI VCG IS YN E      G     +LI  +  ++GF+  DY
Sbjct:   73 GGVIAEVVSDGNHLKKGDIVIGNLSWQEFSAVSESALR-KIDTSLAPASAYLGILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSDEKIDYLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDAVMNLLNEFARIPVCGAISSYNAESEADDMGPRVQSKLIKTKSLMQGFIVSDY 282          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: PTGR1_MOUSE (Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 6.376e-42
Identity = 99/206 (48.06%), Postives = 132/206 (64.08%), Query Frame = 1
Query:    7 VAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQLL-IKIQHTD-VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEK--PEGVHNLEQLIGKRIRLEGFL 612
            VA+  +S +  + K  +V    GW  +S+     L  + ++  D +PLS   G +GMPG+TAY GL ++C  K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS EKV  LK K GFD AFNYK    L+ AL+   P G D YF+NVGG+  +AV+L M+  GRIA+CG ISQYN     P+G    E +I +++R+EGF+
Sbjct:   68 VARVVESKNSAFPKGTIVAALLGWTSHSISDGNGLTKLPVEWPDKLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVMVSAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNAVILQMKTFGRIAICGAISQYNRTGPCPQGPAP-EVVIYQQLRMEGFI 271          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: YNCB_ECOLI (Putative NADP-dependent oxidoreductase yncB OS=Escherichia coli (strain K12) GN=yncB PE=3 SV=3)

HSP 1 Score: 168.318 bits (425), Expect = 3.164e-41
Identity = 97/221 (43.89%), Postives = 129/221 (58.37%), Query Frame = 1
Query:    1 GGVAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYN-LEKPEGVHNLEQLIG----KRIRLEGF-LAGDYYHLYPKF 645
            G V++  +S HP+Y   D V G +GW++Y + +   L+    H   P S+  G+LGMPG TAY GL ++  PK+GE + V+AA+G VG  VGQ  KL GC VVG AG  EK        GFD   ++  +   +   K C P+GIDIY+ENVGGK+ DAVL  +    RI VCG++S YN  E P G   L  L+     KRIRL+GF +A DY H   +F
Sbjct:   77 GTVSRVVESNHPDYQSGDWVLGYSGWQDYDISSGDDLVKLGDHPQNP-SWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVVGVAGGAEKCRHATEVLGFDVCLDHHADDFAEQLAKAC-PKGIDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYGHRIHEF 295          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: PTGR1_CAVPO (Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.133e-41
Identity = 97/206 (47.09%), Postives = 129/206 (62.62%), Query Frame = 1
Query:    7 VAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQL--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNL--EKPEGVHNLEQLIGKRIRLEGFL 612
            VA+  +S +  +    +V   +GW  + +     L  L+      +PLS   G +GMPG+TAY GL EVC  K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS EK+  LK + GFD AFNYK    L+ ALK+  P G D YF+NVGG+ L+ VL  M+  G+IA+CG IS YN   + P G  + E +I K++R+EGF+
Sbjct:   68 VARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPG-PSPESIIYKQLRIEGFI 271          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: PTGR1_RAT (Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 5.968e-40
Identity = 95/205 (46.34%), Postives = 128/205 (62.44%), Query Frame = 1
Query:    7 VAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQLL-IKIQHTD-VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP-EGVHNLEQLIGKRIRLEGFL 612
            VA+  +S +  +    +V    GW  +S+     L  +  +  D +PLS   G +GMPG+TAY GL ++C  K GE V V+AA+GAVG +VGQ AKL GC VVG+AGS EKV  LK K GFD AFNYK    L+ AL+   P G D YF+NVGG+  + V+L M+  GRIA+CG ISQYN   P     + E +I +++R+EGF+
Sbjct:   68 VARVVESKNSAFPTGTIVVALLGWTSHSISDGNGLRKLPAEWPDKLPLSLALGTVGMPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNTVILQMKTFGRIAICGAISQYNRTGPCPPGPSPEVIIYQQLRMEGFI 271          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: PTGR1_BOVIN (Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.868e-39
Identity = 92/205 (44.88%), Postives = 124/205 (60.49%), Query Frame = 1
Query:    7 VAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQL--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP-EGVHNLEQLIGKRIRLEGFL 612
            VA+  +S +  +    +V   +GW  +S+    +L  ++      +PLS   G +GMPG+TAY GL ++C  K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS EKV  LK K GFD A NYK    L+ ALK   P+G D YF+NVGG+  +  +  M+  GRIA+CG IS YN   P     + E +I K + L+GF+
Sbjct:   68 VARVVESKNSAFPTGTIVLAPSGWTTHSISNGEKLEKVLAEWPDTLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLKGCKVVGTAGSDEKVAWLK-KHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGGEFSNVAITQMKKFGRIAICGAISVYNRTSPLSPGPSPEIIIFKELHLQGFV 271          
The following BLAST results are available for this feature:
BLAST of DN135173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
P2_ARATH2.384e-9776.92Probable NADP-dependent oxidoreductase P2 OS=Arabi... [more]
P1_ARATH4.208e-9474.66Probable NADP-dependent oxidoreductase P1 OS=Arabi... [more]
PTGR1_RABIT4.415e-4346.60Prostaglandin reductase 1 OS=Oryctolagus cuniculus... [more]
YKM8_SCHPO9.837e-4347.42Zinc-type alcohol dehydrogenase-like protein PB24D... [more]
YFMJ_BACSU2.862e-4245.50Putative NADP-dependent oxidoreductase yfmJ OS=Bac... [more]
PTGR1_MOUSE6.376e-4248.06Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1... [more]
YNCB_ECOLI3.164e-4143.89Putative NADP-dependent oxidoreductase yncB OS=Esc... [more]
PTGR1_CAVPO4.133e-4147.09Prostaglandin reductase 1 OS=Cavia porcellus GN=Pt... [more]
PTGR1_RAT5.968e-4046.34Prostaglandin reductase 1 OS=Rattus norvegicus GN=... [more]
PTGR1_BOVIN3.868e-3944.88Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 P... [more]

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Properties
Property NameValue
Genbank descriptionwca07c11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07c11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135173 ID=DN135173; Name=DN135173; organism=Citrus sinensis; type=EST; length=663bp
GGGGGGGTAGCTAAAGNNNNGGATTCTACACATCCAAATTATGCAAAAGA
TGACTTGGTTTGGGGCTCCACCGGGTGGGAGGAGTACAGTCTCGTTACAG
CCCCACAGCTTTTGATTAAAATTCAGCATACAGATGTGCCCCTTTCATAC
TATACTGGAATCCTTGGTATGCCTGGTGTGACTGCATACGCTGGTTTATA
CGAAGTTTGCTCTCCGAAGAAAGGTGAGTACGTCTATGTATCTGCAGCAT
CTGGAGCTGTTGGTCAGCTTGTTGGCCAATTTGCAAAATTGGCTGGTTGC
TATGTTGTTGGAAGTGCTGGAAGCAAAGAAAAGGTCGATTTGTTGAAGAA
CAAGTTTGGATTTGATGATGCTTTTAACTACAAGCAAGAGCCAGACTTGG
ATGCAGCACTCAAAAGATGCTTCCCTCAAGGAATCGACATATATTTCGAA
AACGTTGGGGGAAAGATGCTGGACGCAGTGCTACTCAACATGAGGCTCCG
GGGCCGCATTGCGGTATGCGGTATGATCTCGCAGTACAACCTGGAAAAAC
CTGAAGGCGTACACAACTTAGAGCAACTGATCGGGAAACGGATTCGCCTG
GAAGGATTTCTAGCTGGTGATTACTATCACCTCTATCCGAAATTCTTGGA
ACTGGTCATTCCT
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