DN135144

Overview
NameDN135144
Unique NameDN135144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN135144_ssr34 microsatellite DN135144_ssr34:34..45. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13760 contig Csv1_Contig13760:1..663. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135144 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.148e-25
Identity = 69/186 (37.10%), Postives = 101/186 (54.30%), Query Frame = 1
Query:   49 MKTSFVVKLSFLILALATKAQ---LGTSESEPVLDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGTSGE-CPLDVVQLSSPTERDHYVRLLPFDNST-VVRESTDLNL-----------IEPVWTVGNYNDSLGKWFLTTGGIIGHPGAKTLLNWFKLEKVSVSIYNLVHCPSVCDSCVKLCNKVG 558
            MKT+  V L  L+ A  +K+    +  + + PVLD  G+++++ ++Y +L   +G  GG    G  +G+ CP  VVQ  S  +    V     D+   VVR STD+N+              VW + NY++S GKW++TT G+ G PG  TL +WFK+EK  V  Y    CPSVCDSC  LC+ +G
Sbjct:    1 MKTATAVVL--LLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLGYKFRFCPSVCDSCTTLCSDIG 184          
BLAST of DN135144 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 2.542e-22
Identity = 67/194 (34.54%), Postives = 98/194 (50.52%), Query Frame = 1
Query:   49 MKTSFVVKLSFL----ILALATKAQLGTSES--EPVLDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGTSGE---CPLDVVQLSSPTERDHYVRLLPFD-NSTVVRESTDLNL-----------IEPVWTVGNYNDSLGKWFLTTGGIIGHPGAKTLLNWFKLEKVSVS-IYNLVHCPSVCDSCVKLCNKVGIF 564
            MK   ++ LSF     +LA A    L  ++S   PVLD+ G K+ +   Y ++ V     GG ++   T      CP  VVQ     + D  +   P +    VVR STDLN+              VW +  Y++S G++F+T GG+ G+PG +T+ +WFK+E+   S  Y LV CP+VC SC   C  VGI+
Sbjct:    1 MKELTMLSLSFFFVSALLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIY 194          
BLAST of DN135144 vs. ExPASy Swiss-Prot
Match: SPI5_SOLTU (Serine protease inhibitor 5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11
Identity = 54/172 (31.40%), Postives = 81/172 (47.09%), Query Frame = 1
Query:  121 SESEPVLDVYGNKVESNLEYKLLEVKNGTSGG--------------------FSIHGGTSGECPLDVVQLSS---PTERDHYVRLLPFDNSTVVRESTDLNLIEPVWTVGNYNDSLGKWFLTTGGIIGHPGAKTLLNWFKLEKVSVSIYNLVHCPSVCDSCVKLCNKVGIFY 567
            S++ PVLDV G +++  L Y+++ +  G  GG                    F+   G SG  P+  +  SS   P   +  +  + FD STV      L +   +W VG+Y+ SLG   L TGG IG   +    +WFK+ K S   YNL++CP   D   + C KVG+ +
Sbjct:   31 SDATPVLDVTGKELDPRLSYRIISIGRGALGGDVYLGKSPNSDAPCANGVFRFNSDVGPSGT-PVRFIGSSSHFGPHIFEGELLNIQFDISTV-----KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLGYNLLYCPFSSDD--QFCLKVGVVH 190          
The following BLAST results are available for this feature:
BLAST of DN135144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC7.148e-2537.1021 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.542e-2234.54Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
SPI5_SOLTU4.498e-1131.40Serine protease inhibitor 5 OS=Solanum tuberosum P... [more]
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Properties
Property NameValue
Genbank descriptionwca06h06 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06h06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135144 ID=DN135144; Name=DN135144; organism=Citrus sinensis; type=EST; length=666bp
GGGGAAACAACAAACANNNGTTAGCTATCCTTCAAATAAATAAATAAAAT
GAAGACTTCATTCGTAGTAAAACTCTCATTCCTTATCCTTGCTTTGGCCA
CAAAAGCTCAGTTGGGCACCTCAGAATCTGAGCCAGTCTTAGATGTCTAT
GGCAACAAGGTCGAATCCAACCTCGAGTATAAGCTTCTCGAAGTCAAAAA
TGGCACTAGTGGTGGATTCAGTATACATGGAGGCACAAGTGGAGAGTGTC
CGTTGGACGTTGTCCAACTAAGTTCTCCTACGGAAAGGGATCATTATGTA
AGATTATTACCGTTTGACAATTCTACAGTTGTCCGGGAATCCACTGATCT
CAACTTGATAGAACCAGTATGGACAGTTGGAAACTATAATGATTCATTAG
GAAAATGGTTTCTAACAACCGGCGGAATCATCGGCCACCCAGGAGCTAAA
ACGTTGCTAAATTGGTTTAAGCTTGAGAAAGTTAGTGTCAGTATATACAA
TCTTGTTCATTGTCCATCTGTTTGCGATTCTTGCGTTAAACTCTGTAACA
AAGTCGGCATCTTCTATGTGGACGGCGTTCGACGTCTAGTTCTGGTTCGT
GATGATGATCAGCCTCTGCGGTTGGTGTTATTTCCAGCTCCTAATCCTTC
AAGATCCTCTATGTAA
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