DN135122

Overview
NameDN135122
Unique NameDN135122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5347 contig Csv1_Contig5347:11..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135122 vs. ExPASy Swiss-Prot
Match: MGST3_MOUSE (Microsomal glutathione S-transferase 3 OS=Mus musculus GN=Mgst3 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.949e-23
Identity = 55/131 (41.98%), Postives = 74/131 (56.49%), Query Frame = 1
Query:  145 LPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKDAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFIVTRFFYFKGYATGDPQKRL--TIGKYGFLVLLGLMVCT 531
            L  EYG+V L       +   +   VG ARKKYKV YP +Y+ + EN    +FNC+QR HQN+LE+ P F   + VGG+ HP + + LG  +I+ R  Y  GY TGDP KR    +G      L+G  VC+
Sbjct:    4 LSKEYGFVLLTGAASFVMVLHLAINVGKARKKYKVEYPVMYSTDPEN--GHMFNCIQRAHQNTLEVYPPFLFFLTVGGVYHPRIASGLGLAWIIGRVLYAYGYYTGDPSKRYRGAVGSLALFALMGTTVCS 132          
BLAST of DN135122 vs. ExPASy Swiss-Prot
Match: MGST3_BOVIN (Microsomal glutathione S-transferase 3 OS=Bos taurus GN=MGST3 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.949e-23
Identity = 58/137 (42.34%), Postives = 78/137 (56.93%), Query Frame = 1
Query:  145 LPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKDAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFIVTRFFYFKGYATGDPQKRLTIGKYGFLVLLGLMVCTISFGINQL 555
            L  EYG+V L       +   +   V  ARKKYKV YPT+Y+ + EN    +FNC+QR HQN+LE+ P F   + VGG+ HP + + LG  +IV R  Y  GY TG+P+KR   G   F+ L+GLM  T+      L
Sbjct:    4 LSKEYGFVILTGAASFLMVTHLAINVSKARKKYKVEYPTMYSTDPEN--GHIFNCIQRAHQNTLEVYPPFLFFLAVGGVYHPRIVSGLGLAWIVGRVLYAYGYYTGEPRKRQR-GALSFIALIGLMGTTVCSAFQHL 137          
BLAST of DN135122 vs. ExPASy Swiss-Prot
Match: MGST3_HUMAN (Microsomal glutathione S-transferase 3 OS=Homo sapiens GN=MGST3 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.155e-22
Identity = 57/137 (41.61%), Postives = 77/137 (56.20%), Query Frame = 1
Query:  145 LPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKDAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFIVTRFFYFKGYATGDPQKRLTIGKYGFLVLLGLMVCTISFGINQL 555
            L  EYG+V L       +   +   V  ARKKYKV YP +Y+ + EN    +FNC+QR HQN+LE+ P F   + VGG+ HP + + LG  +IV R  Y  GY TG+P KR + G  G + LLGL+  T+      L
Sbjct:    4 LSKEYGFVLLTGAASFIMVAHLAINVSKARKKYKVEYPIMYSTDPEN--GHIFNCIQRAHQNTLEVYPPFLFFLAVGGVYHPRIASGLGLAWIVGRVLYAYGYYTGEPSKR-SRGALGSIALLGLVGTTVCSAFQHL 137          
The following BLAST results are available for this feature:
BLAST of DN135122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MGST3_MOUSE1.949e-2341.98Microsomal glutathione S-transferase 3 OS=Mus musc... [more]
MGST3_BOVIN1.949e-2342.34Microsomal glutathione S-transferase 3 OS=Bos taur... [more]
MGST3_HUMAN2.155e-2241.61Microsomal glutathione S-transferase 3 OS=Homo sap... [more]
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Properties
Property NameValue
Genbank descriptionwca06e10 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06e10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135122 ID=DN135122; Name=DN135122; organism=Citrus sinensis; type=EST; length=612bp
GGGGAGTTTCATTTTANNNNTTAAAAGAGAAAGAAAGAGATCAGTTCCTG
CAATTCCTATTTCATATCGTTCGTTGGTCAACGTTGTCTCTTGGGTGAGA
TGTTTTCATCGATCGACTCGACTATGGCGGATGCAACTCAATTTCTGCCA
ACAGAATACGGATATGTGGCTCTTGTTCTTGTTTTCTACTGCTTTCTCAA
TTTCTGGATGGGTTTTCAAGTTGGCGCTGCCCGCAAGAAGTATAAGGTGC
CCTATCCTACCCTCTACGCTGTAGAATCTGAGAATAAAGATGCTAAGCTC
TTTAACTGCGTTCAGAGAGGGCATCAGAACTCTTTGGAACTTATGCCGGT
GTTTTTCATGTTGATGATAGTCGGAGGGCTAAAGCATCCATGTGTTTGTG
CCGTACTCGGATCCCTTTTCATTGTCACTCGTTTTTTCTACTTCAAAGGC
TATGCTACTGGCGATCCTCAGAAACGCCTCACTATTGGGAAATATGGATT
CTTGGTTTTGCTTGGACTGATGGTCTGCACAATTTCATTTGGGATCAATC
AACTTCGAGGATAAACACTTGTAGTTCATCCTTTCTTTTGCATGGGACTC
GCTTTCCCTCTA
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