DN135113

Overview
NameDN135113
Unique NameDN135113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length436
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:120..555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135113 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.886e-23
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 1
Query:   88 MSDTCGDCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 285
            MSDTCG+CDCAD++QCVKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DN135113 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.399e-18
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 1
Query:   97 TCGDCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCGS 288
            TCG+CDC D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DN135113 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.827e-18
Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1
Query:   88 MSDTCGDCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTC 282
            MSD CG+CDCAD SQCVKKG+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DN135113 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.917e-16
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 1
Query:   88 MSDTCGDCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTC 282
            MS  C +CDC+D SQC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DN135113 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.976e-16
Identity = 38/66 (57.58%), Postives = 46/66 (69.70%), Query Frame = 1
Query:   88 MSDTCGDCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 285
            MS  C +CDCAD +QCVKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DN135113 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.891e-15
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 1
Query:   88 MSDTCGDCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 285
            MSD CG+CDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135113 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.891e-15
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 1
Query:   88 MSDTCGDCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 285
            MSD CG+CDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135113 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.770e-13
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 1
Query:   88 MSDTCGDCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 285
            MSD CG+CDCAD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DN135113 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.019e-13
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   88 MSDTCGDCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 285
            MSD CG CDCAD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DN135113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA1.886e-2368.18Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC1.399e-1859.38Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE1.827e-1866.15Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV2.917e-1656.92Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO4.976e-1657.58Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ1.891e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.891e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ1.770e-1348.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI3.019e-1348.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionwca06d07 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06d07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135113 ID=DN135113; Name=DN135113; organism=Citrus sinensis; type=EST; length=436bp
GGGGATCACAGCAAAGCNNNNCAAGTTTCGTACAATAAAGAGCCCTCTAT
TTCCAGTTTTAAATTCCAAGTTCAAAGCTCAATCAACATGTCGGACACCT
GCGGCGACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAAGC
AGCTATGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGT
TGTTGTCATGGACGTTCAGGCTGCTGAGACTGAAGGTAACTGCAAGTGCG
GCCCCACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCA
AACACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGTGG
GGGTTAAGAATAATGTAAGGGTGATTAAAAAAAAAGAAAAATTCTCTACT
TCGTTTTTATGATGGTCTACTACTAGTGTGTGGCGT
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